RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 GATAD1Q8WUU5 269 aa9.51□□□□□ -0.89
SMN1-202ENST00000380707 ZNF256Q9Y2P7 627 aaPredicted RBP9.51□□□□□ -0.89
SMN1-202ENST00000380707 TRAV5A0A0B4J249 113 aa9.5□□□□□ -0.89
SMN1-202ENST00000380707 CD5P06127 495 aa9.5□□□□□ -0.89
SMN1-202ENST00000380707 GP9P14770 177 aa9.5□□□□□ -0.89
SMN1-202ENST00000380707 GBGT1Q8N5D6 347 aa9.5□□□□□ -0.89
SMN1-202ENST00000380707 GNPNAT1Q96EK6 184 aaPredicted RBP9.5□□□□□ -0.89
SMN1-202ENST00000380707 PSMG3Q9BT73 122 aaPredicted RBP9.5□□□□□ -0.89
SMN1-202ENST00000380707 ZNF471Q9BX82 626 aaPredicted RBP9.5□□□□□ -0.89
SMN1-202ENST00000380707 SLC25A32Q9H2D1 315 aa9.5□□□□□ -0.89
SMN1-202ENST00000380707 MS4A6AQ9H2W1 248 aa9.5□□□□□ -0.89
SMN1-202ENST00000380707 SEPSECSQ9HD40 501 aaKnown RBP9.5□□□□□ -0.89
SMN1-202ENST00000380707 PRKDCP78527 4128 aaKnown RBP9.5□□□□□ -0.89
SMN1-202ENST00000380707 HELTA6NFD8 242 aa9.49□□□□□ -0.89
SMN1-202ENST00000380707 PRB2P02812 416 aaPredicted RBP9.49□□□□□ -0.89
SMN1-202ENST00000380707 S100A7P31151 101 aa9.49□□□□□ -0.89
SMN1-202ENST00000380707 FAM78BQ5VT40 261 aa9.49□□□□□ -0.89
SMN1-202ENST00000380707 SPATA31B1PQ5VZV4 182 aa9.49□□□□□ -0.89
SMN1-202ENST00000380707 S100A7AQ86SG5 101 aa9.49□□□□□ -0.89
SMN1-202ENST00000380707 OR2G3Q8NGZ4 309 aa9.49□□□□□ -0.89
SMN1-202ENST00000380707 PRR25Q96S07 402 aa9.49□□□□□ -0.89
SMN1-202ENST00000380707 SPAG8Q99932 426 aaPredicted RBP9.49□□□□□ -0.89
SMN1-202ENST00000380707 ZMAT5Q9UDW3 170 aaKnown RBP9.49□□□□□ -0.89
SMN1-202ENST00000380707 SMAD5-AS1Q9Y6J3 95 aa9.49□□□□□ -0.89
SMN1-202ENST00000380707 TFPI2P48307 235 aa9.48□□□□□ -0.89
SMN1-202ENST00000380707 RAB2AP61019 212 aa9.48□□□□□ -0.89
SMN1-202ENST00000380707 SERF2P84101 59 aa9.48□□□□□ -0.89
SMN1-202ENST00000380707 STXBP6Q8NFX7 210 aa9.48□□□□□ -0.89
SMN1-202ENST00000380707 C17orf77Q96MU5 243 aa9.48□□□□□ -0.89
SMN1-202ENST00000380707 SPP1P10451 314 aa9.47□□□□□ -0.89
SMN1-202ENST00000380707 M6PRP20645 277 aa9.47□□□□□ -0.89
SMN1-202ENST00000380707 ACOT6Q3I5F7 207 aaPredicted RBP9.47□□□□□ -0.89
SMN1-202ENST00000380707 MIR17HGQ75NE6 70 aa9.47□□□□□ -0.89
SMN1-202ENST00000380707 WFDC3Q8IUB2 231 aa9.47□□□□□ -0.89
SMN1-202ENST00000380707 DCANP1Q8TF63 244 aa9.47□□□□□ -0.89
SMN1-202ENST00000380707 GPR82Q96P67 336 aa9.47□□□□□ -0.89
SMN1-202ENST00000380707 DNASE2O00115 360 aaPredicted RBP9.46□□□□□ -0.89
SMN1-202ENST00000380707 MRPS12O15235 138 aaKnown RBP9.46□□□□□ -0.89
SMN1-202ENST00000380707 EIF3GO75821 320 aaKnown RBP eCLIP9.46□□□□□ -0.89
SMN1-202ENST00000380707 CD7P09564 240 aa9.46□□□□□ -0.89
SMN1-202ENST00000380707 RPL7P18124 248 aaKnown RBP9.46□□□□□ -0.89
SMN1-202ENST00000380707 GALR1P47211 349 aa9.46□□□□□ -0.89
SMN1-202ENST00000380707 PAFAH1B2P68402 229 aa9.46□□□□□ -0.89
SMN1-202ENST00000380707 RPP25LQ8N5L8 163 aaKnown RBP9.46□□□□□ -0.89
SMN1-202ENST00000380707 OR10G4Q8NGN3 311 aa9.46□□□□□ -0.89
SMN1-202ENST00000380707 OR10G9Q8NGN4 311 aa9.46□□□□□ -0.89
SMN1-202ENST00000380707 OR10G7Q8NGN6 311 aa9.46□□□□□ -0.89
SMN1-202ENST00000380707 STOML3Q8TAV4 291 aa9.46□□□□□ -0.89
SMN1-202ENST00000380707 SLC25A2Q9BXI2 301 aa9.46□□□□□ -0.89
SMN1-202ENST00000380707 NRN1Q9NPD7 142 aa9.46□□□□□ -0.89
SMN1-202ENST00000380707 AURKAIP1Q9NWT8 199 aaPredicted RBP9.46□□□□□ -0.89
SMN1-202ENST00000380707 FUT9Q9Y231 359 aa9.46□□□□□ -0.89
SMN1-202ENST00000380707 OR4C46A6NHA9 309 aa9.46□□□□□ -0.9
SMN1-202ENST00000380707 SNRPCP09234 159 aaKnown RBP9.46□□□□□ -0.9
SMN1-202ENST00000380707 CD81P60033 236 aa9.46□□□□□ -0.9
SMN1-202ENST00000380707 RHOBP62745 196 aa9.46□□□□□ -0.9
SMN1-202ENST00000380707 BPIFA4PQ86YQ2 179 aa9.46□□□□□ -0.9
SMN1-202ENST00000380707 BAP18Q8IXM2 172 aa9.46□□□□□ -0.9
SMN1-202ENST00000380707 Q8N1Y9 231 aa9.46□□□□□ -0.9
SMN1-202ENST00000380707 FAM24BQ8N5W8 94 aa9.46□□□□□ -0.9
SMN1-202ENST00000380707 FAM167A-AS1Q96KT0 104 aa9.46□□□□□ -0.9
SMN1-202ENST00000380707 MRPL32Q9BYC8 188 aaKnown RBP9.46□□□□□ -0.9
SMN1-202ENST00000380707 RPRMQ9NS64 109 aa9.46□□□□□ -0.9
SMN1-202ENST00000380707 RNF24Q9Y225 148 aa9.46□□□□□ -0.9
SMN1-202ENST00000380707 TRAV2A0A0B4J234 112 aa9.45□□□□□ -0.9
SMN1-202ENST00000380707 BOLA2-SMG1P6H3BVE0 249 aa9.45□□□□□ -0.9
SMN1-202ENST00000380707 K7EQG2 157 aa9.45□□□□□ -0.9
SMN1-202ENST00000380707 MBP02144 154 aa9.45□□□□□ -0.9
SMN1-202ENST00000380707 TPT1P13693 172 aaKnown RBP9.45□□□□□ -0.9
SMN1-202ENST00000380707 EIF5AP63241 154 aaKnown RBP9.45□□□□□ -0.9
SMN1-202ENST00000380707 TMEM41BQ5BJD5 291 aa9.45□□□□□ -0.9
SMN1-202ENST00000380707 FAM122CQ6P4D5 195 aa9.45□□□□□ -0.9
SMN1-202ENST00000380707 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.45□□□□□ -0.9
SMN1-202ENST00000380707 GTSCR1Q86UQ5 136 aa9.45□□□□□ -0.9
SMN1-202ENST00000380707 SLC51BQ86UW2 128 aa9.45□□□□□ -0.9
SMN1-202ENST00000380707 H3BQ15 152 aa9.44□□□□□ -0.9
SMN1-202ENST00000380707 SEC11BP0C7V7 166 aa9.44□□□□□ -0.9
SMN1-202ENST00000380707 IGLC2P0DOY2 106 aa9.44□□□□□ -0.9
SMN1-202ENST00000380707 PYYP10082 97 aa9.44□□□□□ -0.9
SMN1-202ENST00000380707 ATF4P18848 351 aaPredicted RBP9.44□□□□□ -0.9
SMN1-202ENST00000380707 ODF3L2Q3SX64 289 aa9.44□□□□□ -0.9
SMN1-202ENST00000380707 WFDC10AQ9H1F0 79 aa9.44□□□□□ -0.9
SMN1-202ENST00000380707 C19orf73Q9NVV2 129 aa9.44□□□□□ -0.9
SMN1-202ENST00000380707 TMEM14CQ9P0S9 112 aa9.44□□□□□ -0.9
SMN1-202ENST00000380707 UBQLN2Q9UHD9 624 aa9.44□□□□□ -0.9
SMN1-202ENST00000380707 A0A087X0K7 114 aa9.43□□□□□ -0.9
SMN1-202ENST00000380707 A0A1W2PPV4 95 aa9.43□□□□□ -0.9
SMN1-202ENST00000380707 H3BTX0 84 aa9.43□□□□□ -0.9
SMN1-202ENST00000380707 K7EIL1 84 aa9.43□□□□□ -0.9
SMN1-202ENST00000380707 SOCS3O14543 225 aa9.43□□□□□ -0.9
SMN1-202ENST00000380707 HMGB3O15347 200 aaKnown RBP9.43□□□□□ -0.9
SMN1-202ENST00000380707 C4BPBP20851 252 aa9.43□□□□□ -0.9
SMN1-202ENST00000380707 AKR1C8PQ5T2L2 129 aa9.43□□□□□ -0.9
SMN1-202ENST00000380707 SSX7Q7RTT5 188 aa9.43□□□□□ -0.9
SMN1-202ENST00000380707 TMED6Q8WW62 240 aa9.43□□□□□ -0.9
SMN1-202ENST00000380707 ZNF503Q96F45 646 aa9.43□□□□□ -0.9
SMN1-202ENST00000380707 HRH4Q9H3N8 390 aa9.43□□□□□ -0.9
SMN1-202ENST00000380707 ZNF688P0C7X2 276 aa9.42□□□□□ -0.9
SMN1-202ENST00000380707 CDC34P49427 236 aaPredicted RBP9.42□□□□□ -0.9
SMN1-202ENST00000380707 FHITP49789 147 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms