RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 NXPH1P58417 271 aa7.56□□□□□ -1.2
PTPRA-204ENST00000380393 SRSF9Q13242 221 aaKnown RBP eCLIP7.56□□□□□ -1.2
PTPRA-204ENST00000380393 PCSK4Q6UW60 755 aa7.56□□□□□ -1.2
PTPRA-204ENST00000380393 HIST1H4GQ99525 98 aa7.56□□□□□ -1.2
PTPRA-204ENST00000380393 FAM173AQ9BQD7 235 aa7.56□□□□□ -1.2
PTPRA-204ENST00000380393 RAXQ9Y2V3 346 aa7.56□□□□□ -1.2
PTPRA-204ENST00000380393 ZNF292O60281 2723 aa7.56□□□□□ -1.2
PTPRA-204ENST00000380393 SYNGR3O43761 229 aa7.56□□□□□ -1.2
PTPRA-204ENST00000380393 OR2H2O95918 312 aa7.56□□□□□ -1.2
PTPRA-204ENST00000380393 EFNB3Q15768 340 aa7.56□□□□□ -1.2
PTPRA-204ENST00000380393 GATD1Q8NB37 220 aa7.56□□□□□ -1.2
PTPRA-204ENST00000380393 PGLYRP4Q96LB8 373 aa7.56□□□□□ -1.2
PTPRA-204ENST00000380393 DUX3Q96PT4 197 aa7.56□□□□□ -1.2
PTPRA-204ENST00000380393 ALKBH4Q9NXW9 302 aa7.56□□□□□ -1.2
PTPRA-204ENST00000380393 TMEM131Q92545 1883 aa7.55□□□□□ -1.2
PTPRA-204ENST00000380393 IGKV1-27A0A075B6S5 117 aa7.55□□□□□ -1.2
PTPRA-204ENST00000380393 C15orf62A8K5M9 175 aa7.55□□□□□ -1.2
PTPRA-204ENST00000380393 C15orf65H3BRN8 121 aa7.55□□□□□ -1.2
PTPRA-204ENST00000380393 MPDU1O75352 247 aa7.55□□□□□ -1.2
PTPRA-204ENST00000380393 IFI6P09912 130 aa7.55□□□□□ -1.2
PTPRA-204ENST00000380393 LY6DQ14210 128 aa7.55□□□□□ -1.2
PTPRA-204ENST00000380393 ABHD12Q8N2K0 398 aa7.55□□□□□ -1.2
PTPRA-204ENST00000380393 GJC3Q8NFK1 279 aa7.55□□□□□ -1.2
PTPRA-204ENST00000380393 OR9G1Q8NH87 305 aa7.55□□□□□ -1.2
PTPRA-204ENST00000380393 FRYQ5TBA9 3013 aa7.55□□□□□ -1.2
PTPRA-204ENST00000380393 IGKV3-11P04433 115 aa7.55□□□□□ -1.2
PTPRA-204ENST00000380393 PMS2CLQ68D20 193 aa7.55□□□□□ -1.2
PTPRA-204ENST00000380393 MGST2Q99735 147 aa7.55□□□□□ -1.2
PTPRA-204ENST00000380393 EPDR1Q9UM22 224 aa7.55□□□□□ -1.2
PTPRA-204ENST00000380393 PTPRBP23467 1997 aa7.55□□□□□ -1.2
PTPRA-204ENST00000380393 CEP250Q9BV73 2442 aa7.55□□□□□ -1.2
PTPRA-204ENST00000380393 TM4SF5O14894 197 aa7.54□□□□□ -1.2
PTPRA-204ENST00000380393 EFNA2O43921 213 aa7.54□□□□□ -1.2
PTPRA-204ENST00000380393 DUSP14O95147 198 aaKnown RBP7.54□□□□□ -1.2
PTPRA-204ENST00000380393 ACP1P24666 158 aa7.54□□□□□ -1.2
PTPRA-204ENST00000380393 SPRNQ5BIV9 151 aa7.54□□□□□ -1.2
PTPRA-204ENST00000380393 FAM231DQ6ZW35 169 aa7.54□□□□□ -1.2
PTPRA-204ENST00000380393 FLYWCH2Q96CP2 140 aaKnown RBP7.54□□□□□ -1.2
PTPRA-204ENST00000380393 PLPPR2Q96GM1 343 aa7.54□□□□□ -1.2
PTPRA-204ENST00000380393 C1orf43Q9BWL3 253 aa7.54□□□□□ -1.2
PTPRA-204ENST00000380393 TMEM167BQ9NRX6 74 aa7.54□□□□□ -1.2
PTPRA-204ENST00000380393 DKK2Q9UBU2 259 aa7.54□□□□□ -1.2
PTPRA-204ENST00000380393 GVINP1Q7Z2Y8 2422 aa7.54□□□□□ -1.2
PTPRA-204ENST00000380393 RND1Q92730 232 aa7.54□□□□□ -1.2
PTPRA-204ENST00000380393 TIMD4Q96H15 378 aa7.54□□□□□ -1.2
PTPRA-204ENST00000380393 AHCTF1Q8WYP5 2266 aa7.54□□□□□ -1.2
PTPRA-204ENST00000380393 HOXA3O43365 443 aaPredicted RBP7.54□□□□□ -1.2
PTPRA-204ENST00000380393 ORM1P02763 201 aa7.54□□□□□ -1.2
PTPRA-204ENST00000380393 OR1C1Q15619 314 aa7.54□□□□□ -1.2
PTPRA-204ENST00000380393 C4orf26Q17RF5 130 aa7.54□□□□□ -1.2
PTPRA-204ENST00000380393 ZC2HC1BQ5TFG8 222 aa7.54□□□□□ -1.2
PTPRA-204ENST00000380393 MIR17HGQ75NE6 70 aa7.54□□□□□ -1.2
PTPRA-204ENST00000380393 TMEM219Q86XT9 240 aa7.54□□□□□ -1.2
PTPRA-204ENST00000380393 RPRMLQ8N4K4 120 aa7.54□□□□□ -1.2
PTPRA-204ENST00000380393 SPTSSAQ969W0 71 aa7.54□□□□□ -1.2
PTPRA-204ENST00000380393 LRP4O75096 1905 aa7.54□□□□□ -1.2
PTPRA-204ENST00000380393 SCGB1C2P0DMR2 95 aa7.53□□□□□ -1.2
PTPRA-204ENST00000380393 FXYD7P58549 80 aa7.53□□□□□ -1.2
PTPRA-204ENST00000380393 SRYQ05066 204 aa7.53□□□□□ -1.2
PTPRA-204ENST00000380393 ZNF318Q5VUA4 2279 aa7.53□□□□□ -1.2
PTPRA-204ENST00000380393 RHBDD2Q6NTF9 364 aa7.53□□□□□ -1.2
PTPRA-204ENST00000380393 MORN3Q6PF18 240 aaPredicted RBP7.53□□□□□ -1.2
PTPRA-204ENST00000380393 FAM214BQ7L5A3 538 aa7.53□□□□□ -1.2
PTPRA-204ENST00000380393 ARRDC1-AS1Q9H2J1 176 aa7.53□□□□□ -1.2
PTPRA-204ENST00000380393 A0A1W2PQD3 144 aa7.53□□□□□ -1.2
PTPRA-204ENST00000380393 ZFP2Q6ZN57 461 aa7.53□□□□□ -1.2
PTPRA-204ENST00000380393 ZNF837Q96EG3 531 aaPredicted RBP7.53□□□□□ -1.2
PTPRA-204ENST00000380393 LINC00477Q96M19 166 aa7.53□□□□□ -1.2
PTPRA-204ENST00000380393 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.53□□□□□ -1.2
PTPRA-204ENST00000380393 FOXC1Q12948 553 aa7.53□□□□□ -1.2
PTPRA-204ENST00000380393 UTF1Q5T230 341 aa7.53□□□□□ -1.2
PTPRA-204ENST00000380393 MOB3BQ86TA1 216 aa7.53□□□□□ -1.2
PTPRA-204ENST00000380393 FGFBP3Q8TAT2 258 aa7.53□□□□□ -1.2
PTPRA-204ENST00000380393 ST8SIA1Q92185 356 aa7.53□□□□□ -1.2
PTPRA-204ENST00000380393 PRRC2CQ9Y520 2896 aaKnown RBP7.53□□□□□ -1.2
PTPRA-204ENST00000380393 NDUFS7O75251 213 aa7.52□□□□□ -1.21
PTPRA-204ENST00000380393 TAL2Q16559 108 aa7.52□□□□□ -1.21
PTPRA-204ENST00000380393 KLF17Q5JT82 389 aaPredicted RBP7.52□□□□□ -1.21
PTPRA-204ENST00000380393 BAALCQ8WXS3 180 aa7.52□□□□□ -1.21
PTPRA-204ENST00000380393 IFI27L1Q96BM0 104 aa7.52□□□□□ -1.21
PTPRA-204ENST00000380393 BOD1L1Q8NFC6 3051 aa7.52□□□□□ -1.21
PTPRA-204ENST00000380393 CECR9P0C854 216 aa7.52□□□□□ -1.21
PTPRA-204ENST00000380393 CFHR1Q03591 330 aa7.52□□□□□ -1.21
PTPRA-204ENST00000380393 LOXL1Q08397 574 aaPredicted RBP7.52□□□□□ -1.21
PTPRA-204ENST00000380393 WFDC3Q8IUB2 231 aa7.52□□□□□ -1.21
PTPRA-204ENST00000380393 LOC389332A0A1B0GUA5 103 aa7.52□□□□□ -1.21
PTPRA-204ENST00000380393 LMO7DNF2Z398 122 aa7.52□□□□□ -1.21
PTPRA-204ENST00000380393 LYRM7Q5U5X0 104 aa7.52□□□□□ -1.21
PTPRA-204ENST00000380393 TRPT1Q86TN4 253 aaKnown RBP7.52□□□□□ -1.21
PTPRA-204ENST00000380393 FAM57AQ8TBR7 257 aa7.52□□□□□ -1.21
PTPRA-204ENST00000380393 TMEM158Q8WZ71 300 aa7.52□□□□□ -1.21
PTPRA-204ENST00000380393 CD7P09564 240 aa7.51□□□□□ -1.21
PTPRA-204ENST00000380393 CA6P23280 308 aa7.51□□□□□ -1.21
PTPRA-204ENST00000380393 RPS28P62857 69 aaKnown RBP7.51□□□□□ -1.21
PTPRA-204ENST00000380393 GUSBP11Q6P575 273 aa7.51□□□□□ -1.21
PTPRA-204ENST00000380393 GTSCR1Q86UQ5 136 aa7.51□□□□□ -1.21
PTPRA-204ENST00000380393 A0A096LNJ9 63 aa7.51□□□□□ -1.21
PTPRA-204ENST00000380393 FAM236AA0A1B0GUQ0 79 aa7.51□□□□□ -1.21
PTPRA-204ENST00000380393 FAM236BA0A1B0GV22 79 aa7.51□□□□□ -1.21
PTPRA-204ENST00000380393 IGLV3-1P01715 115 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms