RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 IGKV2-40A0A087WW87 121 aaPredicted RBP9.17□□□□□ -0.94
SMAD9-202ENST00000379826 FNDC10F2Z333 226 aa9.17□□□□□ -0.94
SMAD9-202ENST00000379826 IGKV2D-40P01614 121 aaPredicted RBP9.17□□□□□ -0.94
SMAD9-202ENST00000379826 PSG9Q00887 426 aa9.17□□□□□ -0.94
SMAD9-202ENST00000379826 CCL25O15444 150 aa9.17□□□□□ -0.94
SMAD9-202ENST00000379826 MFAP4P55083 255 aa9.17□□□□□ -0.94
SMAD9-202ENST00000379826 EIF4EBP1Q13541 118 aaPredicted RBP9.17□□□□□ -0.94
SMAD9-202ENST00000379826 PPP1R27Q86WC6 154 aa9.17□□□□□ -0.94
SMAD9-202ENST00000379826 TMEM160Q9NX00 188 aa9.17□□□□□ -0.94
SMAD9-202ENST00000379826 DOCK10Q96BY6 2186 aa9.17□□□□□ -0.94
SMAD9-202ENST00000379826 KLF17Q5JT82 389 aaPredicted RBP9.16□□□□□ -0.94
SMAD9-202ENST00000379826 ZNF788Q6ZQV5 615 aa9.16□□□□□ -0.94
SMAD9-202ENST00000379826 LINC00173Q6ZV60 143 aa9.16□□□□□ -0.94
SMAD9-202ENST00000379826 FXYD5Q96DB9 178 aa9.16□□□□□ -0.94
SMAD9-202ENST00000379826 IGKV1OR2-108A0A075B7D4 117 aa9.16□□□□□ -0.94
SMAD9-202ENST00000379826 SMKR1H3BMG3 65 aa9.16□□□□□ -0.94
SMAD9-202ENST00000379826 SPANXN1Q5VSR9 72 aa9.16□□□□□ -0.94
SMAD9-202ENST00000379826 TOMM40O96008 361 aa9.16□□□□□ -0.94
SMAD9-202ENST00000379826 Q86TA4 180 aa9.16□□□□□ -0.94
SMAD9-202ENST00000379826 TP73-AS1Q9UF72 201 aa9.16□□□□□ -0.94
SMAD9-202ENST00000379826 RABAC1Q9UI14 185 aa9.16□□□□□ -0.94
SMAD9-202ENST00000379826 RNF114Q9Y508 228 aa9.16□□□□□ -0.94
SMAD9-202ENST00000379826 GVINP1Q7Z2Y8 2422 aa9.16□□□□□ -0.94
SMAD9-202ENST00000379826 ARMS2P0C7Q2 107 aa9.16□□□□□ -0.94
SMAD9-202ENST00000379826 IGHV1-8P0DP01 117 aa9.16□□□□□ -0.94
SMAD9-202ENST00000379826 IFI27P40305 119 aaPredicted RBP9.16□□□□□ -0.94
SMAD9-202ENST00000379826 LEPP41159 167 aa9.16□□□□□ -0.94
SMAD9-202ENST00000379826 GUSBP1Q15486 140 aa9.16□□□□□ -0.94
SMAD9-202ENST00000379826 ZNF833PQ6ZTB9 187 aa9.16□□□□□ -0.94
SMAD9-202ENST00000379826 ZNF207O43670 478 aaKnown RBP9.15□□□□□ -0.94
SMAD9-202ENST00000379826 PROP1O75360 226 aa9.15□□□□□ -0.94
SMAD9-202ENST00000379826 C8orf49Q96NF6 230 aa9.15□□□□□ -0.94
SMAD9-202ENST00000379826 COL4A2P08572 1712 aa9.15□□□□□ -0.94
SMAD9-202ENST00000379826 LOC105371242A0A075B767 164 aa9.15□□□□□ -0.94
SMAD9-202ENST00000379826 IGHV2-26A0A0B4J1V2 119 aa9.15□□□□□ -0.94
SMAD9-202ENST00000379826 HEATR1Q9H583 2144 aaKnown RBP9.15□□□□□ -0.94
SMAD9-202ENST00000379826 IGLV1-44P01699 117 aa9.15□□□□□ -0.94
SMAD9-202ENST00000379826 SLC25A16P16260 332 aa9.15□□□□□ -0.94
SMAD9-202ENST00000379826 LYZL1Q6UWQ5 148 aa9.15□□□□□ -0.94
SMAD9-202ENST00000379826 ORMDL3Q8N138 153 aa9.15□□□□□ -0.94
SMAD9-202ENST00000379826 DDB2Q92466 427 aa9.15□□□□□ -0.94
SMAD9-202ENST00000379826 RNF125Q96EQ8 232 aa9.15□□□□□ -0.94
SMAD9-202ENST00000379826 RITA1Q96K30 269 aa9.15□□□□□ -0.94
SMAD9-202ENST00000379826 FOXC2Q99958 501 aa9.15□□□□□ -0.94
SMAD9-202ENST00000379826 XIRP2A4UGR9 3374 aa9.15□□□□□ -0.95
SMAD9-202ENST00000379826 TMEM178BH3BS89 294 aa9.15□□□□□ -0.95
SMAD9-202ENST00000379826 CFHR2P36980 270 aa9.15□□□□□ -0.95
SMAD9-202ENST00000379826 CCDC144NLQ6NUI1 221 aa9.15□□□□□ -0.95
SMAD9-202ENST00000379826 TRGV9Q99603 122 aa9.15□□□□□ -0.95
SMAD9-202ENST00000379826 ICE1Q9Y2F5 2266 aa9.15□□□□□ -0.95
SMAD9-202ENST00000379826 ZNF503Q96F45 646 aa9.14□□□□□ -0.95
SMAD9-202ENST00000379826 MEGF9Q9H1U4 602 aa9.14□□□□□ -0.95
SMAD9-202ENST00000379826 TRAV8-6A0A0B4J262 113 aa9.14□□□□□ -0.95
SMAD9-202ENST00000379826 SMIM13P0DJ93 91 aa9.14□□□□□ -0.95
SMAD9-202ENST00000379826 SPCS1Q9Y6A9 102 aa9.14□□□□□ -0.95
SMAD9-202ENST00000379826 E7EUB6 86 aa9.14□□□□□ -0.95
SMAD9-202ENST00000379826 F5H697 171 aa9.14□□□□□ -0.95
SMAD9-202ENST00000379826 J3QR89 54 aa9.14□□□□□ -0.95
SMAD9-202ENST00000379826 ZNF843Q8N446 348 aa9.14□□□□□ -0.95
SMAD9-202ENST00000379826 FER1L6-AS1Q8NA97 138 aa9.14□□□□□ -0.95
SMAD9-202ENST00000379826 IGFBPL1Q8WX77 278 aa9.14□□□□□ -0.95
SMAD9-202ENST00000379826 IGHV1-3A0A0C4DH29 117 aa9.13□□□□□ -0.95
SMAD9-202ENST00000379826 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.13□□□□□ -0.95
SMAD9-202ENST00000379826 MSMPQ1L6U9 139 aa9.13□□□□□ -0.95
SMAD9-202ENST00000379826 Q8TAT8 98 aa9.13□□□□□ -0.95
SMAD9-202ENST00000379826 NCKAP5O14513 1909 aa9.13□□□□□ -0.95
SMAD9-202ENST00000379826 TIMM23O14925 209 aa9.13□□□□□ -0.95
SMAD9-202ENST00000379826 TMEM213A2RRL7 107 aa9.13□□□□□ -0.95
SMAD9-202ENST00000379826 NPIPB5A8MRT5 1133 aa9.13□□□□□ -0.95
SMAD9-202ENST00000379826 ITGB1BP1O14713 200 aa9.13□□□□□ -0.95
SMAD9-202ENST00000379826 PRSS57Q6UWY2 283 aa9.13□□□□□ -0.95
SMAD9-202ENST00000379826 HIST1H4GQ99525 98 aa9.13□□□□□ -0.95
SMAD9-202ENST00000379826 MED12LQ86YW9 2145 aa9.13□□□□□ -0.95
SMAD9-202ENST00000379826 MBD3L4A6NDZ8 208 aaPredicted RBP9.13□□□□□ -0.95
SMAD9-202ENST00000379826 MBD3L3A6NE82 208 aaPredicted RBP9.13□□□□□ -0.95
SMAD9-202ENST00000379826 MBD3L5A6NJ08 208 aaPredicted RBP9.13□□□□□ -0.95
SMAD9-202ENST00000379826 AMN1Q8IY45 258 aa9.13□□□□□ -0.95
SMAD9-202ENST00000379826 MBD3L2Q8NHZ7 208 aaPredicted RBP9.13□□□□□ -0.95
SMAD9-202ENST00000379826 ZC2HC1AQ96GY0 325 aa9.13□□□□□ -0.95
SMAD9-202ENST00000379826 PLA2G2AP14555 144 aa9.13□□□□□ -0.95
SMAD9-202ENST00000379826 SCGB1D4Q6XE38 83 aa9.13□□□□□ -0.95
SMAD9-202ENST00000379826 M0R3E3 92 aa9.12□□□□□ -0.95
SMAD9-202ENST00000379826 SMIM17P0DL12 118 aa9.12□□□□□ -0.95
SMAD9-202ENST00000379826 SAPCD1Q5SSQ6 148 aa9.12□□□□□ -0.95
SMAD9-202ENST00000379826 COL6A6A6NMZ7 2263 aa9.12□□□□□ -0.95
SMAD9-202ENST00000379826 TRAV30A0A087WSZ9 112 aa9.12□□□□□ -0.95
SMAD9-202ENST00000379826 NDUFA3O95167 84 aa9.12□□□□□ -0.95
SMAD9-202ENST00000379826 KLRD1Q13241 179 aa9.12□□□□□ -0.95
SMAD9-202ENST00000379826 PATE2Q6UY27 113 aa9.12□□□□□ -0.95
SMAD9-202ENST00000379826 IGLC7A0M8Q6 106 aa9.12□□□□□ -0.95
SMAD9-202ENST00000379826 PRSS46E5RG02 174 aa9.12□□□□□ -0.95
SMAD9-202ENST00000379826 SH2D1AO60880 128 aa9.12□□□□□ -0.95
SMAD9-202ENST00000379826 SCGB1C2P0DMR2 95 aa9.12□□□□□ -0.95
SMAD9-202ENST00000379826 FAM231DQ6ZW35 169 aa9.12□□□□□ -0.95
SMAD9-202ENST00000379826 HBDP02042 147 aa9.12□□□□□ -0.95
SMAD9-202ENST00000379826 PSG3Q16557 428 aa9.12□□□□□ -0.95
SMAD9-202ENST00000379826 Q6ZS92 163 aa9.12□□□□□ -0.95
SMAD9-202ENST00000379826 C17orf77Q96MU5 243 aa9.12□□□□□ -0.95
SMAD9-202ENST00000379826 ADIPOQQ15848 244 aa9.11□□□□□ -0.95
SMAD9-202ENST00000379826 TMEM78Q5T7P6 136 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms