RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 POU2AF1Q16633 256 aa8.67□□□□□ -1.02
NEDD9-201ENST00000379433 ZNF506Q5JVG8 444 aa8.67□□□□□ -1.02
NEDD9-201ENST00000379433 ZNF833PQ6ZTB9 187 aa8.67□□□□□ -1.02
NEDD9-201ENST00000379433 TVP23CQ96ET8 276 aa8.67□□□□□ -1.02
NEDD9-201ENST00000379433 VAX2Q9UIW0 290 aa8.67□□□□□ -1.02
NEDD9-201ENST00000379433 TRAV5A0A0B4J249 113 aa8.67□□□□□ -1.02
NEDD9-201ENST00000379433 IGHV3-35A0A0C4DH35 117 aa8.67□□□□□ -1.02
NEDD9-201ENST00000379433 M0R2Z0 102 aa8.67□□□□□ -1.02
NEDD9-201ENST00000379433 HIST1H1EP10412 219 aaKnown RBP8.67□□□□□ -1.02
NEDD9-201ENST00000379433 RUSC1-AS1Q66K80 236 aa8.67□□□□□ -1.02
NEDD9-201ENST00000379433 MIR17HGQ75NE6 70 aa8.67□□□□□ -1.02
NEDD9-201ENST00000379433 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.67□□□□□ -1.02
NEDD9-201ENST00000379433 OR1B1Q8NGR6 318 aa8.67□□□□□ -1.02
NEDD9-201ENST00000379433 OR1L8Q8NGR8 309 aa8.67□□□□□ -1.02
NEDD9-201ENST00000379433 SSBP3Q9BWW4 388 aaPredicted RBP8.67□□□□□ -1.02
NEDD9-201ENST00000379433 FOXA2Q9Y261 457 aaPredicted RBP8.67□□□□□ -1.02
NEDD9-201ENST00000379433 IGHV3OR16-8A0A075B7F1 116 aa8.67□□□□□ -1.02
NEDD9-201ENST00000379433 TMEM213A2RRL7 107 aa8.67□□□□□ -1.02
NEDD9-201ENST00000379433 PRTN3P24158 256 aa8.67□□□□□ -1.02
NEDD9-201ENST00000379433 VMA21Q3ZAQ7 101 aa8.67□□□□□ -1.02
NEDD9-201ENST00000379433 BPESC1Q9GZL8 116 aa8.67□□□□□ -1.02
NEDD9-201ENST00000379433 CENPVL3A0A0U1RRI6 287 aa8.66□□□□□ -1.02
NEDD9-201ENST00000379433 RND2P52198 227 aa8.66□□□□□ -1.02
NEDD9-201ENST00000379433 PRCDQ00LT1 54 aa8.66□□□□□ -1.02
NEDD9-201ENST00000379433 HSD52Q0P140 79 aa8.66□□□□□ -1.02
NEDD9-201ENST00000379433 PSG5Q15238 335 aa8.66□□□□□ -1.02
NEDD9-201ENST00000379433 HLA-DRB5Q30154 266 aa8.66□□□□□ -1.02
NEDD9-201ENST00000379433 OR5AN1Q8NGI8 311 aa8.66□□□□□ -1.02
NEDD9-201ENST00000379433 ITLN2Q8WWU7 325 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-201ENST00000379433 PRORYQ9H606 182 aa8.66□□□□□ -1.02
NEDD9-201ENST00000379433 FKBP11Q9NYL4 201 aa8.66□□□□□ -1.02
NEDD9-201ENST00000379433 PAM16Q9Y3D7 125 aa8.66□□□□□ -1.02
NEDD9-201ENST00000379433 FASNP49327 2511 aaKnown RBP8.66□□□□□ -1.02
NEDD9-201ENST00000379433 IGHV1-3A0A0C4DH29 117 aa8.66□□□□□ -1.02
NEDD9-201ENST00000379433 A0A1W2PRE2 83 aa8.66□□□□□ -1.02
NEDD9-201ENST00000379433 BUB1B-PAK6H3BSN5 160 aa8.66□□□□□ -1.02
NEDD9-201ENST00000379433 IL3RAP26951 378 aa8.66□□□□□ -1.02
NEDD9-201ENST00000379433 HNRNPA3P51991 378 aaKnown RBP8.66□□□□□ -1.02
NEDD9-201ENST00000379433 RHOGP84095 191 aa8.66□□□□□ -1.02
NEDD9-201ENST00000379433 FAM90A2PQ658T7 463 aa8.66□□□□□ -1.02
NEDD9-201ENST00000379433 OSR1Q8TAX0 266 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-201ENST00000379433 PARLQ9H300 379 aa8.66□□□□□ -1.02
NEDD9-201ENST00000379433 MRPL36Q9P0J6 103 aaKnown RBP8.66□□□□□ -1.02
NEDD9-201ENST00000379433 MTORP42345 2549 aa8.66□□□□□ -1.02
NEDD9-201ENST00000379433 A0A1W2PPI3 338 aa8.65□□□□□ -1.02
NEDD9-201ENST00000379433 IGHV3-23P01764 117 aa8.65□□□□□ -1.02
NEDD9-201ENST00000379433 ZFP36P26651 326 aaKnown RBP8.65□□□□□ -1.02
NEDD9-201ENST00000379433 KIAA1644Q3SXP7 199 aa8.65□□□□□ -1.02
NEDD9-201ENST00000379433 AMMECR1LQ6DCA0 310 aa8.65□□□□□ -1.02
NEDD9-201ENST00000379433 TRGC1P0CF51 173 aa8.65□□□□□ -1.02
NEDD9-201ENST00000379433 RPL24P83731 157 aaKnown RBP8.65□□□□□ -1.02
NEDD9-201ENST00000379433 CTDSP1Q9GZU7 261 aa8.65□□□□□ -1.02
NEDD9-201ENST00000379433 A0A1B0GW64 132 aa8.65□□□□□ -1.03
NEDD9-201ENST00000379433 GAGE12HA6NDE8 117 aa8.65□□□□□ -1.03
NEDD9-201ENST00000379433 PPP5D1E7EU14 171 aa8.65□□□□□ -1.03
NEDD9-201ENST00000379433 TRGC2P03986 189 aa8.65□□□□□ -1.03
NEDD9-201ENST00000379433 DLX6P56179 175 aa8.65□□□□□ -1.03
NEDD9-201ENST00000379433 ZNF415Q09FC8 603 aa8.65□□□□□ -1.03
NEDD9-201ENST00000379433 KHDC1LQ5JSQ8 128 aa8.65□□□□□ -1.03
NEDD9-201ENST00000379433 MORN5Q5VZ52 161 aa8.65□□□□□ -1.03
NEDD9-201ENST00000379433 KIR2DL5BQ8NHK3 375 aa8.65□□□□□ -1.03
NEDD9-201ENST00000379433 MBD3L1Q8WWY6 194 aa8.65□□□□□ -1.03
NEDD9-201ENST00000379433 C1orf159Q96HA4 380 aa8.65□□□□□ -1.03
NEDD9-201ENST00000379433 ERG28Q9UKR5 140 aa8.65□□□□□ -1.03
NEDD9-201ENST00000379433 TNFRSF13BO14836 293 aaPredicted RBP8.64□□□□□ -1.03
NEDD9-201ENST00000379433 CXCL1P09341 107 aa8.64□□□□□ -1.03
NEDD9-201ENST00000379433 RNASE2P10153 161 aaKnown RBP8.64□□□□□ -1.03
NEDD9-201ENST00000379433 FA2HQ7L5A8 372 aa8.64□□□□□ -1.03
NEDD9-201ENST00000379433 SLC25A33Q9BSK2 321 aa8.64□□□□□ -1.03
NEDD9-201ENST00000379433 KAAG1Q9UBP8 84 aa8.64□□□□□ -1.03
NEDD9-201ENST00000379433 NAT8Q9UHE5 227 aa8.64□□□□□ -1.03
NEDD9-201ENST00000379433 SCO2A0A1W2PP80 73 aa8.64□□□□□ -1.03
NEDD9-201ENST00000379433 SPINK4O60575 86 aa8.64□□□□□ -1.03
NEDD9-201ENST00000379433 HTR1DP28221 377 aa8.64□□□□□ -1.03
NEDD9-201ENST00000379433 FCGR2BP31994 310 aaPredicted RBP8.64□□□□□ -1.03
NEDD9-201ENST00000379433 FOXL1Q12952 345 aa8.64□□□□□ -1.03
NEDD9-201ENST00000379433 FOXE3Q13461 319 aa8.64□□□□□ -1.03
NEDD9-201ENST00000379433 FBXL19-AS1Q494R0 122 aa8.64□□□□□ -1.03
NEDD9-201ENST00000379433 Q8N7P7 452 aa8.64□□□□□ -1.03
NEDD9-201ENST00000379433 MAPK1IP1LQ8NDC0 245 aa8.64□□□□□ -1.03
NEDD9-201ENST00000379433 LINC00869P0C866 280 aa8.64□□□□□ -1.03
NEDD9-201ENST00000379433 RPL27AP46776 148 aaKnown RBP8.64□□□□□ -1.03
NEDD9-201ENST00000379433 SSX8Q7RTT4 187 aa8.64□□□□□ -1.03
NEDD9-201ENST00000379433 SERTAD4Q9NUC0 356 aa8.64□□□□□ -1.03
NEDD9-201ENST00000379433 RBP4P02753 201 aa8.63□□□□□ -1.03
NEDD9-201ENST00000379433 PYYP10082 97 aa8.63□□□□□ -1.03
NEDD9-201ENST00000379433 FAM3BP58499 235 aaPredicted RBP8.63□□□□□ -1.03
NEDD9-201ENST00000379433 DPPA3Q6W0C5 159 aa8.63□□□□□ -1.03
NEDD9-201ENST00000379433 PDPNQ86YL7 162 aa8.63□□□□□ -1.03
NEDD9-201ENST00000379433 OR5B3Q8NH48 314 aa8.63□□□□□ -1.03
NEDD9-201ENST00000379433 C1QTNF4Q9BXJ3 329 aa8.63□□□□□ -1.03
NEDD9-201ENST00000379433 RETNQ9HD89 108 aa8.63□□□□□ -1.03
NEDD9-201ENST00000379433 PSMB11A5LHX3 300 aa8.63□□□□□ -1.03
NEDD9-201ENST00000379433 VMO1Q7Z5L0 202 aa8.63□□□□□ -1.03
NEDD9-201ENST00000379433 VSTM2AQ8TAG5 236 aa8.63□□□□□ -1.03
NEDD9-201ENST00000379433 TMEM18Q96B42 140 aa8.63□□□□□ -1.03
NEDD9-201ENST00000379433 NDUFA4L2Q9NRX3 87 aa8.63□□□□□ -1.03
NEDD9-201ENST00000379433 ABCA2Q9BZC7 2435 aa8.63□□□□□ -1.03
NEDD9-201ENST00000379433 IGLV2-23P01705 113 aa8.62□□□□□ -1.03
NEDD9-201ENST00000379433 NPPCP23582 126 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms