RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 TRPT1Q86TN4 253 aaKnown RBP13.79□□□□□ -0.2
TMEM88B-201ENST00000378821 OR8I2Q8N0Y5 310 aa13.79□□□□□ -0.2
TMEM88B-201ENST00000378821 SCRT1Q9BWW7 348 aa13.79□□□□□ -0.2
TMEM88B-201ENST00000378821 SLC25A22Q9H936 323 aa13.79□□□□□ -0.2
TMEM88B-201ENST00000378821 HIGD1AQ9Y241 93 aa13.79□□□□□ -0.2
TMEM88B-201ENST00000378821 KLK5Q9Y337 293 aaPredicted RBP13.79□□□□□ -0.2
TMEM88B-201ENST00000378821 HYPMO75409 117 aa13.78□□□□□ -0.2
TMEM88B-201ENST00000378821 CA1P00915 261 aaPredicted RBP13.78□□□□□ -0.2
TMEM88B-201ENST00000378821 FCN2Q15485 313 aa13.78□□□□□ -0.2
TMEM88B-201ENST00000378821 TMEM41BQ5BJD5 291 aa13.78□□□□□ -0.2
TMEM88B-201ENST00000378821 PHLDA1Q8WV24 401 aaPredicted RBP13.78□□□□□ -0.2
TMEM88B-201ENST00000378821 UHRF2Q96PU4 802 aa13.78□□□□□ -0.2
TMEM88B-201ENST00000378821 RNF126Q9BV68 326 aa13.78□□□□□ -0.2
TMEM88B-201ENST00000378821 SLC25A39Q9BZJ4 359 aaPredicted RBP13.78□□□□□ -0.2
TMEM88B-201ENST00000378821 SLC25A31Q9H0C2 315 aa13.78□□□□□ -0.2
TMEM88B-201ENST00000378821 ARL6Q9H0F7 186 aa13.78□□□□□ -0.2
TMEM88B-201ENST00000378821 OR5G3P0C626 314 aa13.77□□□□□ -0.21
TMEM88B-201ENST00000378821 CAMLGP49069 296 aa13.77□□□□□ -0.21
TMEM88B-201ENST00000378821 RAP2BP61225 183 aa13.77□□□□□ -0.21
TMEM88B-201ENST00000378821 PSMG4Q5JS54 123 aa13.77□□□□□ -0.21
TMEM88B-201ENST00000378821 PATE2Q6UY27 113 aa13.77□□□□□ -0.21
TMEM88B-201ENST00000378821 STHQ8IWL8 128 aa13.77□□□□□ -0.21
TMEM88B-201ENST00000378821 OR11H7Q8NGC8 314 aa13.77□□□□□ -0.21
TMEM88B-201ENST00000378821 SHANK2-AS3Q9BTD1 123 aa13.77□□□□□ -0.21
TMEM88B-201ENST00000378821 SEPSECSQ9HD40 501 aaKnown RBP13.77□□□□□ -0.21
TMEM88B-201ENST00000378821 SOCS3O14543 225 aa13.76□□□□□ -0.21
TMEM88B-201ENST00000378821 PET100P0DJ07 73 aa13.76□□□□□ -0.21
TMEM88B-201ENST00000378821 SPP1P10451 314 aa13.76□□□□□ -0.21
TMEM88B-201ENST00000378821 BAXQ07812 192 aa13.76□□□□□ -0.21
TMEM88B-201ENST00000378821 OXA1LQ15070 435 aa13.76□□□□□ -0.21
TMEM88B-201ENST00000378821 ATP6V1FQ16864 119 aa13.76□□□□□ -0.21
TMEM88B-201ENST00000378821 MORN3Q6PF18 240 aaPredicted RBP13.76□□□□□ -0.21
TMEM88B-201ENST00000378821 OR5C1Q8NGR4 320 aa13.76□□□□□ -0.21
TMEM88B-201ENST00000378821 MED28Q9H204 178 aa13.76□□□□□ -0.21
TMEM88B-201ENST00000378821 ARV1Q9H2C2 271 aa13.76□□□□□ -0.21
TMEM88B-201ENST00000378821 MBD2Q9UBB5 411 aa13.76□□□□□ -0.21
TMEM88B-201ENST00000378821 KNCNA6PVL3 124 aa13.75□□□□□ -0.21
TMEM88B-201ENST00000378821 LY6G6CO95867 125 aa13.75□□□□□ -0.21
TMEM88B-201ENST00000378821 FGF7P21781 194 aa13.75□□□□□ -0.21
TMEM88B-201ENST00000378821 S100A7P31151 101 aa13.75□□□□□ -0.21
TMEM88B-201ENST00000378821 GALR1P47211 349 aa13.75□□□□□ -0.21
TMEM88B-201ENST00000378821 SNRPD3P62318 126 aaKnown RBP13.75□□□□□ -0.21
TMEM88B-201ENST00000378821 PXDC1Q5TGL8 231 aa13.75□□□□□ -0.21
TMEM88B-201ENST00000378821 MIC13Q5XKP0 118 aa13.75□□□□□ -0.21
TMEM88B-201ENST00000378821 C17orf77Q96MU5 243 aa13.75□□□□□ -0.21
TMEM88B-201ENST00000378821 MFFQ9GZY8 342 aa13.75□□□□□ -0.21
TMEM88B-201ENST00000378821 BIRC6Q9NR09 4857 aa13.75□□□□□ -0.21
TMEM88B-201ENST00000378821 PRR20EP86478 221 aa13.74□□□□□ -0.21
TMEM88B-201ENST00000378821 PRR20CP86479 221 aa13.74□□□□□ -0.21
TMEM88B-201ENST00000378821 PRR20DP86480 221 aa13.74□□□□□ -0.21
TMEM88B-201ENST00000378821 PRR20BP86481 221 aa13.74□□□□□ -0.21
TMEM88B-201ENST00000378821 PRR20AP86496 221 aa13.74□□□□□ -0.21
TMEM88B-201ENST00000378821 RAB31Q13636 194 aa13.74□□□□□ -0.21
TMEM88B-201ENST00000378821 CLINT1Q14677 625 aa13.74□□□□□ -0.21
TMEM88B-201ENST00000378821 OPCMLQ14982 345 aa13.74□□□□□ -0.21
TMEM88B-201ENST00000378821 Q8NAQ8 132 aa13.74□□□□□ -0.21
TMEM88B-201ENST00000378821 C11orf45Q8TAV5 145 aa13.74□□□□□ -0.21
TMEM88B-201ENST00000378821 ZNF705EA8MWA4 302 aaPredicted RBP13.73□□□□□ -0.21
TMEM88B-201ENST00000378821 COX7A2P2O60397 106 aa13.73□□□□□ -0.21
TMEM88B-201ENST00000378821 ACTL10Q5JWF8 245 aa13.73□□□□□ -0.21
TMEM88B-201ENST00000378821 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.73□□□□□ -0.21
TMEM88B-201ENST00000378821 CSNK1G2-AS1Q8NCQ2 148 aa13.73□□□□□ -0.21
TMEM88B-201ENST00000378821 THAP6Q8TBB0 222 aa13.73□□□□□ -0.21
TMEM88B-201ENST00000378821 TMEM37Q8WXS4 190 aa13.73□□□□□ -0.21
TMEM88B-201ENST00000378821 GPR82Q96P67 336 aa13.73□□□□□ -0.21
TMEM88B-201ENST00000378821 RSG1Q9BU20 258 aa13.73□□□□□ -0.21
TMEM88B-201ENST00000378821 HRH4Q9H3N8 390 aa13.73□□□□□ -0.21
TMEM88B-201ENST00000378821 HSPB11Q9Y547 144 aa13.73□□□□□ -0.21
TMEM88B-201ENST00000378821 C4BPBP20851 252 aa13.72□□□□□ -0.21
TMEM88B-201ENST00000378821 PSMB3P49720 205 aa13.72□□□□□ -0.21
TMEM88B-201ENST00000378821 NANOS2P60321 138 aaKnown RBP13.72□□□□□ -0.21
TMEM88B-201ENST00000378821 LGALS9CQ6DKI2 356 aa13.72□□□□□ -0.21
TMEM88B-201ENST00000378821 LINC00305Q7Z4B0 112 aa13.72□□□□□ -0.21
TMEM88B-201ENST00000378821 CHAC2Q8WUX2 184 aa13.72□□□□□ -0.21
TMEM88B-201ENST00000378821 NPCDR1Q9BY65 106 aa13.72□□□□□ -0.21
TMEM88B-201ENST00000378821 MPDU1O75352 247 aa13.71□□□□□ -0.21
TMEM88B-201ENST00000378821 RPL7P18124 248 aaKnown RBP13.71□□□□□ -0.21
TMEM88B-201ENST00000378821 RPL12P30050 165 aaKnown RBP13.71□□□□□ -0.21
TMEM88B-201ENST00000378821 ID1P41134 155 aa13.71□□□□□ -0.21
TMEM88B-201ENST00000378821 RPL29P47914 159 aaKnown RBP13.71□□□□□ -0.21
TMEM88B-201ENST00000378821 MEOX2P50222 304 aa13.71□□□□□ -0.21
TMEM88B-201ENST00000378821 DEFB1P60022 68 aa13.71□□□□□ -0.21
TMEM88B-201ENST00000378821 B2MP61769 119 aa13.71□□□□□ -0.21
TMEM88B-201ENST00000378821 MORN5Q5VZ52 161 aa13.71□□□□□ -0.21
TMEM88B-201ENST00000378821 S100A7AQ86SG5 101 aa13.71□□□□□ -0.21
TMEM88B-201ENST00000378821 LINC00052Q96N35 136 aa13.71□□□□□ -0.21
TMEM88B-201ENST00000378821 SLC39A9Q9NUM3 307 aa13.71□□□□□ -0.21
TMEM88B-201ENST00000378821 PXMP4Q9Y6I8 212 aa13.71□□□□□ -0.21
TMEM88B-201ENST00000378821 ELOA3CA0A087WX78 387 aaPredicted RBP13.7□□□□□ -0.22
TMEM88B-201ENST00000378821 ISLRO14498 428 aa13.7□□□□□ -0.22
TMEM88B-201ENST00000378821 MRPS12O15235 138 aaKnown RBP13.7□□□□□ -0.22
TMEM88B-201ENST00000378821 RBMY1A1P0DJD3 496 aaKnown RBP13.7□□□□□ -0.22
TMEM88B-201ENST00000378821 RBMY1CP0DJD4 496 aa13.7□□□□□ -0.22
TMEM88B-201ENST00000378821 MIFP14174 115 aa13.7□□□□□ -0.22
TMEM88B-201ENST00000378821 RBMY1FQ15415 496 aaKnown RBP13.7□□□□□ -0.22
TMEM88B-201ENST00000378821 C10orf113Q5VZT2 155 aa13.7□□□□□ -0.22
TMEM88B-201ENST00000378821 Q6ZRG5 221 aa13.7□□□□□ -0.22
TMEM88B-201ENST00000378821 C16orf92Q96LL3 132 aa13.7□□□□□ -0.22
TMEM88B-201ENST00000378821 C20orf173Q96LM9 149 aa13.7□□□□□ -0.22
TMEM88B-201ENST00000378821 ATP5SQ99766 215 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms