RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 SMIM3Q9BZL3 60 aa9.85□□□□□ -0.83
CKAP2-202ENST00000378034 SLC25A32Q9H2D1 315 aa9.85□□□□□ -0.83
CKAP2-202ENST00000378034 MAP6D1Q9H9H5 199 aa9.85□□□□□ -0.83
CKAP2-202ENST00000378034 UBQLN2Q9UHD9 624 aa9.85□□□□□ -0.83
CKAP2-202ENST00000378034 G3V3Q6 166 aa9.84□□□□□ -0.83
CKAP2-202ENST00000378034 ZNF266Q14584 549 aa9.84□□□□□ -0.83
CKAP2-202ENST00000378034 LINC00322Q6ZN03 302 aaPredicted RBP9.84□□□□□ -0.83
CKAP2-202ENST00000378034 LINC00305Q7Z4B0 112 aa9.84□□□□□ -0.83
CKAP2-202ENST00000378034 GATAD1Q8WUU5 269 aa9.84□□□□□ -0.83
CKAP2-202ENST00000378034 UHRF2Q96PU4 802 aa9.84□□□□□ -0.83
CKAP2-202ENST00000378034 WFDC10AQ9H1F0 79 aa9.84□□□□□ -0.83
CKAP2-202ENST00000378034 SNRPD3P62318 126 aaKnown RBP9.84□□□□□ -0.83
CKAP2-202ENST00000378034 CD300CQ08708 224 aa9.84□□□□□ -0.83
CKAP2-202ENST00000378034 WFDC1Q9HC57 220 aa9.84□□□□□ -0.83
CKAP2-202ENST00000378034 ID1P41134 155 aa9.83□□□□□ -0.84
CKAP2-202ENST00000378034 LEMD1Q68G75 181 aa9.83□□□□□ -0.84
CKAP2-202ENST00000378034 RNF222A6NCQ9 220 aa9.83□□□□□ -0.84
CKAP2-202ENST00000378034 DEFB131AP59861 70 aa9.83□□□□□ -0.84
CKAP2-202ENST00000378034 FAM24BQ8N5W8 94 aa9.83□□□□□ -0.84
CKAP2-202ENST00000378034 CITED4Q96RK1 184 aa9.83□□□□□ -0.84
CKAP2-202ENST00000378034 RSG1Q9BU20 258 aa9.83□□□□□ -0.84
CKAP2-202ENST00000378034 LOC102724200A0A096LPH7 203 aaPredicted RBP9.82□□□□□ -0.84
CKAP2-202ENST00000378034 RBMY1BA6NDE4 496 aaKnown RBP9.82□□□□□ -0.84
CKAP2-202ENST00000378034 RBMY1EA6NEQ0 496 aaKnown RBP9.82□□□□□ -0.84
CKAP2-202ENST00000378034 ISLRO14498 428 aa9.82□□□□□ -0.84
CKAP2-202ENST00000378034 RBMY1DP0C7P1 496 aaKnown RBP9.82□□□□□ -0.84
CKAP2-202ENST00000378034 ATF4P18848 351 aaPredicted RBP9.82□□□□□ -0.84
CKAP2-202ENST00000378034 PSMB3P49720 205 aa9.82□□□□□ -0.84
CKAP2-202ENST00000378034 BPIFA4PQ86YQ2 179 aa9.82□□□□□ -0.84
CKAP2-202ENST00000378034 TIMM9Q9Y5J7 89 aa9.82□□□□□ -0.84
CKAP2-202ENST00000378034 PRKDCP78527 4128 aaKnown RBP9.82□□□□□ -0.84
CKAP2-202ENST00000378034 A0A087X0K7 114 aa9.81□□□□□ -0.84
CKAP2-202ENST00000378034 SOCS3O14543 225 aa9.81□□□□□ -0.84
CKAP2-202ENST00000378034 ZNF688P0C7X2 276 aa9.81□□□□□ -0.84
CKAP2-202ENST00000378034 AKAP14Q86UN6 197 aa9.81□□□□□ -0.84
CKAP2-202ENST00000378034 APRG1Q8IVJ8 170 aa9.81□□□□□ -0.84
CKAP2-202ENST00000378034 SBSPONQ8IVN8 264 aa9.81□□□□□ -0.84
CKAP2-202ENST00000378034 HMSDA8MTL9 139 aa9.81□□□□□ -0.84
CKAP2-202ENST00000378034 TAAR5O14804 337 aa9.81□□□□□ -0.84
CKAP2-202ENST00000378034 ARPC5O15511 151 aa9.81□□□□□ -0.84
CKAP2-202ENST00000378034 HAGHQ16775 308 aa9.81□□□□□ -0.84
CKAP2-202ENST00000378034 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.81□□□□□ -0.84
CKAP2-202ENST00000378034 FAM210AQ96ND0 272 aa9.81□□□□□ -0.84
CKAP2-202ENST00000378034 MFFQ9GZY8 342 aa9.81□□□□□ -0.84
CKAP2-202ENST00000378034 BORCS7-ASMTA0A0B4J1R7 106 aa9.8□□□□□ -0.84
CKAP2-202ENST00000378034 MRPS12O15235 138 aaKnown RBP9.8□□□□□ -0.84
CKAP2-202ENST00000378034 CXCL2P19875 107 aa9.8□□□□□ -0.84
CKAP2-202ENST00000378034 ZNF345Q14585 488 aa9.8□□□□□ -0.84
CKAP2-202ENST00000378034 PSMG4Q5JS54 123 aa9.8□□□□□ -0.84
CKAP2-202ENST00000378034 C16orf92Q96LL3 132 aa9.8□□□□□ -0.84
CKAP2-202ENST00000378034 C17orf77Q96MU5 243 aa9.8□□□□□ -0.84
CKAP2-202ENST00000378034 ASCL2Q99929 193 aa9.8□□□□□ -0.84
CKAP2-202ENST00000378034 MRPL32Q9BYC8 188 aaKnown RBP9.8□□□□□ -0.84
CKAP2-202ENST00000378034 KIR2DL5BA0A0G2JN68 375 aa9.79□□□□□ -0.84
CKAP2-202ENST00000378034 KIR2DL5BA0A0G2JPC4 375 aa9.79□□□□□ -0.84
CKAP2-202ENST00000378034 SMLR1H3BR10 107 aa9.79□□□□□ -0.84
CKAP2-202ENST00000378034 APOC4P55056 127 aa9.79□□□□□ -0.84
CKAP2-202ENST00000378034 FFAR4Q5NUL3 377 aa9.79□□□□□ -0.84
CKAP2-202ENST00000378034 FAM78BQ5VT40 261 aa9.79□□□□□ -0.84
CKAP2-202ENST00000378034 MORN5Q5VZ52 161 aa9.79□□□□□ -0.84
CKAP2-202ENST00000378034 KIR2DL5AQ8N109 375 aa9.79□□□□□ -0.84
CKAP2-202ENST00000378034 KIR2DL5BQ8NHK3 375 aa9.79□□□□□ -0.84
CKAP2-202ENST00000378034 ST6GAL2Q96JF0 529 aa9.79□□□□□ -0.84
CKAP2-202ENST00000378034 TM2D3Q9BRN9 247 aa9.79□□□□□ -0.84
CKAP2-202ENST00000378034 PSMG3Q9BT73 122 aaPredicted RBP9.79□□□□□ -0.84
CKAP2-202ENST00000378034 ZMAT4Q9H898 229 aa9.79□□□□□ -0.84
CKAP2-202ENST00000378034 UBE2CO00762 179 aa9.79□□□□□ -0.84
CKAP2-202ENST00000378034 GUK1Q16774 197 aa9.79□□□□□ -0.84
CKAP2-202ENST00000378034 TCTE3Q8IZS6 198 aa9.79□□□□□ -0.84
CKAP2-202ENST00000378034 TMEM14CQ9P0S9 112 aa9.79□□□□□ -0.84
CKAP2-202ENST00000378034 JTBO76095 146 aa9.78□□□□□ -0.84
CKAP2-202ENST00000378034 ZNF124Q15973 351 aa9.78□□□□□ -0.84
CKAP2-202ENST00000378034 ACOT6Q3I5F7 207 aaPredicted RBP9.78□□□□□ -0.84
CKAP2-202ENST00000378034 GCSAMLQ5JQS6 135 aa9.78□□□□□ -0.84
CKAP2-202ENST00000378034 LCN15Q6UWW0 184 aa9.78□□□□□ -0.84
CKAP2-202ENST00000378034 STHQ8IWL8 128 aa9.78□□□□□ -0.84
CKAP2-202ENST00000378034 OR2G3Q8NGZ4 309 aa9.78□□□□□ -0.84
CKAP2-202ENST00000378034 GNPNAT1Q96EK6 184 aaPredicted RBP9.78□□□□□ -0.84
CKAP2-202ENST00000378034 SPATA25Q9BR10 227 aa9.78□□□□□ -0.84
CKAP2-202ENST00000378034 HRH4Q9H3N8 390 aa9.78□□□□□ -0.84
CKAP2-202ENST00000378034 FUT9Q9Y231 359 aa9.78□□□□□ -0.84
CKAP2-202ENST00000378034 TRAV5A0A0B4J249 113 aa9.77□□□□□ -0.84
CKAP2-202ENST00000378034 A0A0D9SG52 128 aa9.77□□□□□ -0.84
CKAP2-202ENST00000378034 ATP6V1G1O75348 118 aa9.77□□□□□ -0.84
CKAP2-202ENST00000378034 IGLC2P0DOY2 106 aa9.77□□□□□ -0.84
CKAP2-202ENST00000378034 RHOBP62745 196 aa9.77□□□□□ -0.84
CKAP2-202ENST00000378034 SERF2P84101 59 aa9.77□□□□□ -0.84
CKAP2-202ENST00000378034 SPATA31B1PQ5VZV4 182 aa9.77□□□□□ -0.84
CKAP2-202ENST00000378034 KCNRGQ8N5I3 272 aa9.77□□□□□ -0.84
CKAP2-202ENST00000378034 HSD17B11Q8NBQ5 300 aa9.77□□□□□ -0.84
CKAP2-202ENST00000378034 OR11H4Q8NGC9 324 aa9.77□□□□□ -0.84
CKAP2-202ENST00000378034 LRRC20Q8TCA0 184 aa9.77□□□□□ -0.84
CKAP2-202ENST00000378034 LINC00052Q96N35 136 aa9.77□□□□□ -0.84
CKAP2-202ENST00000378034 SLC50A1Q9BRV3 221 aa9.77□□□□□ -0.84
CKAP2-202ENST00000378034 RPRMQ9NS64 109 aa9.77□□□□□ -0.84
CKAP2-202ENST00000378034 CLEC5AQ9NY25 188 aa9.77□□□□□ -0.84
CKAP2-202ENST00000378034 M6PRP20645 277 aa9.77□□□□□ -0.85
CKAP2-202ENST00000378034 ATP6V0CP27449 155 aa9.77□□□□□ -0.85
CKAP2-202ENST00000378034 RPL7L1Q6DKI1 246 aaKnown RBP9.77□□□□□ -0.85
CKAP2-202ENST00000378034 ZNF253O75346 499 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms