RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 CACNA1GO43497 2377 aa12.67□□□□□ -0.38
CKAP4-201ENST00000378026 A0A096LNJ9 63 aa12.67□□□□□ -0.38
CKAP4-201ENST00000378026 SMAD7O15105 426 aaKnown RBP12.67□□□□□ -0.38
CKAP4-201ENST00000378026 RIGQ13278 110 aa12.67□□□□□ -0.38
CKAP4-201ENST00000378026 TTTY13Q9BZ97 58 aa12.67□□□□□ -0.38
CKAP4-201ENST00000378026 NPFFR1Q9GZQ6 430 aa12.67□□□□□ -0.38
CKAP4-201ENST00000378026 NCOR1P1Q9H4R4 102 aa12.67□□□□□ -0.38
CKAP4-201ENST00000378026 A0A1W2PPM0 123 aa12.66□□□□□ -0.38
CKAP4-201ENST00000378026 SAMD13Q5VXD3 122 aa12.66□□□□□ -0.38
CKAP4-201ENST00000378026 ZADH2Q8N4Q0 377 aa12.66□□□□□ -0.38
CKAP4-201ENST00000378026 C17orf77Q96MU5 243 aa12.66□□□□□ -0.38
CKAP4-201ENST00000378026 IGLV1-44P01699 117 aa12.66□□□□□ -0.38
CKAP4-201ENST00000378026 PRB3Q04118 309 aaPredicted RBP12.66□□□□□ -0.38
CKAP4-201ENST00000378026 INSIG2Q9Y5U4 225 aa12.66□□□□□ -0.38
CKAP4-201ENST00000378026 TMEM213A2RRL7 107 aa12.65□□□□□ -0.38
CKAP4-201ENST00000378026 TNFRSF1AP19438 455 aa12.65□□□□□ -0.38
CKAP4-201ENST00000378026 GCSHP23434 173 aa12.65□□□□□ -0.38
CKAP4-201ENST00000378026 TNFAIP6P98066 277 aaPredicted RBP12.65□□□□□ -0.38
CKAP4-201ENST00000378026 HSD52Q0P140 79 aa12.65□□□□□ -0.38
CKAP4-201ENST00000378026 NEGR1Q7Z3B1 354 aa12.65□□□□□ -0.38
CKAP4-201ENST00000378026 BOD1L2Q8IYS8 172 aa12.65□□□□□ -0.38
CKAP4-201ENST00000378026 TMEM178AQ8NBL3 297 aa12.65□□□□□ -0.38
CKAP4-201ENST00000378026 C18orf15Q96N68 181 aa12.65□□□□□ -0.38
CKAP4-201ENST00000378026 SIGLEC8Q9NYZ4 499 aa12.65□□□□□ -0.38
CKAP4-201ENST00000378026 PKDREJQ9NTG1 2253 aa12.65□□□□□ -0.38
CKAP4-201ENST00000378026 TEX48A0A1B0GUV7 120 aa12.65□□□□□ -0.38
CKAP4-201ENST00000378026 SMKR1H3BMG3 65 aa12.65□□□□□ -0.38
CKAP4-201ENST00000378026 SMAGPQ0VAQ4 97 aa12.65□□□□□ -0.38
CKAP4-201ENST00000378026 TIMM23BQ5SRD1 257 aa12.65□□□□□ -0.38
CKAP4-201ENST00000378026 ZNF833PQ6ZTB9 187 aa12.65□□□□□ -0.38
CKAP4-201ENST00000378026 AMN1Q8IY45 258 aa12.65□□□□□ -0.38
CKAP4-201ENST00000378026 OR4C13Q8NGP0 309 aa12.65□□□□□ -0.38
CKAP4-201ENST00000378026 ZNF785A8K8V0 405 aa12.65□□□□□ -0.38
CKAP4-201ENST00000378026 NPIPB6E9PJ23 425 aa12.65□□□□□ -0.38
CKAP4-201ENST00000378026 LGALS7P47929 136 aa12.65□□□□□ -0.38
CKAP4-201ENST00000378026 TMEM167AQ8TBQ9 72 aa12.65□□□□□ -0.38
CKAP4-201ENST00000378026 FER1L6-AS2Q96M78 137 aa12.65□□□□□ -0.38
CKAP4-201ENST00000378026 RAI1Q7Z5J4 1906 aaPredicted RBP12.64□□□□□ -0.39
CKAP4-201ENST00000378026 K7ERJ3 54 aa12.64□□□□□ -0.39
CKAP4-201ENST00000378026 FABP2P12104 132 aa12.64□□□□□ -0.39
CKAP4-201ENST00000378026 RBPJQ06330 500 aa12.64□□□□□ -0.39
CKAP4-201ENST00000378026 CHTOPQ9Y3Y2 248 aaKnown RBP12.64□□□□□ -0.39
CKAP4-201ENST00000378026 IGLV2-11P01706 119 aa12.64□□□□□ -0.39
CKAP4-201ENST00000378026 CCL8P80075 99 aa12.64□□□□□ -0.39
CKAP4-201ENST00000378026 DKK2Q9UBU2 259 aa12.64□□□□□ -0.39
CKAP4-201ENST00000378026 PPIAL4CA0A0B4J2A2 164 aa12.63□□□□□ -0.39
CKAP4-201ENST00000378026 PPIAL4GP0DN37 164 aa12.63□□□□□ -0.39
CKAP4-201ENST00000378026 ADAMTSL5Q6ZMM2 481 aa12.63□□□□□ -0.39
CKAP4-201ENST00000378026 RPRMLQ8N4K4 120 aa12.63□□□□□ -0.39
CKAP4-201ENST00000378026 ZNF414Q96IQ9 312 aa12.63□□□□□ -0.39
CKAP4-201ENST00000378026 OVOL3O00110 214 aa12.63□□□□□ -0.39
CKAP4-201ENST00000378026 NKX2-8O15522 239 aa12.63□□□□□ -0.39
CKAP4-201ENST00000378026 SAMD5Q5TGI4 173 aa12.63□□□□□ -0.39
CKAP4-201ENST00000378026 TDHQ8IZJ6 230 aa12.63□□□□□ -0.39
CKAP4-201ENST00000378026 PRELID3AQ96N28 172 aa12.63□□□□□ -0.39
CKAP4-201ENST00000378026 ZNF71Q9NQZ8 489 aaPredicted RBP12.63□□□□□ -0.39
CKAP4-201ENST00000378026 HIGD1AQ9Y241 93 aa12.63□□□□□ -0.39
CKAP4-201ENST00000378026 CCL11P51671 97 aa12.63□□□□□ -0.39
CKAP4-201ENST00000378026 PROCRQ9UNN8 238 aa12.63□□□□□ -0.39
CKAP4-201ENST00000378026 RBP4P02753 201 aa12.62□□□□□ -0.39
CKAP4-201ENST00000378026 FCGR2BP31994 310 aaPredicted RBP12.62□□□□□ -0.39
CKAP4-201ENST00000378026 ZNF788Q6ZQV5 615 aa12.62□□□□□ -0.39
CKAP4-201ENST00000378026 C8orf46Q8TAG6 207 aa12.62□□□□□ -0.39
CKAP4-201ENST00000378026 SLC25A15Q9Y619 301 aa12.62□□□□□ -0.39
CKAP4-201ENST00000378026 AZU1P20160 251 aa12.62□□□□□ -0.39
CKAP4-201ENST00000378026 APOBEC3AP31941 199 aaPredicted RBP12.62□□□□□ -0.39
CKAP4-201ENST00000378026 DLX1P56177 255 aa12.62□□□□□ -0.39
CKAP4-201ENST00000378026 ABHD17AQ96GS6 310 aa12.62□□□□□ -0.39
CKAP4-201ENST00000378026 M0R3E3 92 aa12.61□□□□□ -0.39
CKAP4-201ENST00000378026 CNTFRP26992 372 aa12.61□□□□□ -0.39
CKAP4-201ENST00000378026 Q5PR19 223 aa12.61□□□□□ -0.39
CKAP4-201ENST00000378026 C1orf162Q8NEQ5 155 aaPredicted RBP12.61□□□□□ -0.39
CKAP4-201ENST00000378026 C8orf49Q96NF6 230 aa12.61□□□□□ -0.39
CKAP4-201ENST00000378026 OTORQ9NRC9 128 aa12.61□□□□□ -0.39
CKAP4-201ENST00000378026 IGLV2-23P01705 113 aa12.61□□□□□ -0.39
CKAP4-201ENST00000378026 IGHV1-46P01743 117 aa12.61□□□□□ -0.39
CKAP4-201ENST00000378026 CRIP1P50238 77 aa12.61□□□□□ -0.39
CKAP4-201ENST00000378026 FXYD2P54710 66 aa12.61□□□□□ -0.39
CKAP4-201ENST00000378026 LYZL1Q6UWQ5 148 aa12.61□□□□□ -0.39
CKAP4-201ENST00000378026 DHRS13Q6UX07 377 aa12.6□□□□□ -0.39
CKAP4-201ENST00000378026 OR5A1Q8NGJ0 315 aa12.6□□□□□ -0.39
CKAP4-201ENST00000378026 OR9G4Q8NGQ1 327 aa12.6□□□□□ -0.39
CKAP4-201ENST00000378026 FAM222BQ8WU58 562 aa12.6□□□□□ -0.39
CKAP4-201ENST00000378026 IFI27L1Q96BM0 104 aa12.6□□□□□ -0.39
CKAP4-201ENST00000378026 TRGV9Q99603 122 aa12.6□□□□□ -0.39
CKAP4-201ENST00000378026 SLC25A39Q9BZJ4 359 aaPredicted RBP12.6□□□□□ -0.39
CKAP4-201ENST00000378026 LAMTOR5O43504 91 aa12.6□□□□□ -0.39
CKAP4-201ENST00000378026 SMIM13P0DJ93 91 aa12.6□□□□□ -0.39
CKAP4-201ENST00000378026 WT1P19544 449 aaPredicted RBP12.6□□□□□ -0.39
CKAP4-201ENST00000378026 PSG3Q16557 428 aa12.6□□□□□ -0.39
CKAP4-201ENST00000378026 LGALS9BQ3B8N2 356 aa12.6□□□□□ -0.39
CKAP4-201ENST00000378026 LGALS9CQ6DKI2 356 aa12.6□□□□□ -0.39
CKAP4-201ENST00000378026 BCL6BQ8N143 479 aaPredicted RBP12.6□□□□□ -0.39
CKAP4-201ENST00000378026 TACC2O95359 2948 aa12.6□□□□□ -0.39
CKAP4-201ENST00000378026 ATMQ13315 3056 aa12.6□□□□□ -0.39
CKAP4-201ENST00000378026 VMA21Q3ZAQ7 101 aa12.6□□□□□ -0.39
CKAP4-201ENST00000378026 OR4X2Q8NGF9 303 aa12.6□□□□□ -0.39
CKAP4-201ENST00000378026 PSG8Q9UQ74 426 aa12.6□□□□□ -0.39
CKAP4-201ENST00000378026 TM4SF5O14894 197 aa12.59□□□□□ -0.39
CKAP4-201ENST00000378026 MTURNQ8N3F0 131 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms