RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 M0R381 172 aa7.09□□□□□ -1.27
PCDH9-202ENST00000377865 IGLV2-14P01704 120 aa7.09□□□□□ -1.27
PCDH9-202ENST00000377865 MLANAQ16655 118 aa7.09□□□□□ -1.27
PCDH9-202ENST00000377865 GTSCR1Q86UQ5 136 aa7.09□□□□□ -1.27
PCDH9-202ENST00000377865 S4R3C0 116 aa7.09□□□□□ -1.27
PCDH9-202ENST00000377865 KNL1Q8NG31 2342 aa7.09□□□□□ -1.27
PCDH9-202ENST00000377865 IGKV2-40A0A087WW87 121 aaPredicted RBP7.09□□□□□ -1.27
PCDH9-202ENST00000377865 IGHV2-70DA0A0C4DH43 119 aa7.09□□□□□ -1.27
PCDH9-202ENST00000377865 A0A1W2PPI3 338 aa7.09□□□□□ -1.27
PCDH9-202ENST00000377865 IGKV2D-40P01614 121 aaPredicted RBP7.09□□□□□ -1.27
PCDH9-202ENST00000377865 ARMS2P0C7Q2 107 aa7.09□□□□□ -1.27
PCDH9-202ENST00000377865 EVI2AP22794 236 aa7.09□□□□□ -1.27
PCDH9-202ENST00000377865 ZNF56Q15929 161 aa7.09□□□□□ -1.27
PCDH9-202ENST00000377865 FAM104BQ5XKR9 115 aa7.09□□□□□ -1.27
PCDH9-202ENST00000377865 DPF1Q92782 380 aa7.09□□□□□ -1.27
PCDH9-202ENST00000377865 ZNF138P52744 262 aa7.08□□□□□ -1.28
PCDH9-202ENST00000377865 ZNF562Q6V9R5 426 aa7.08□□□□□ -1.28
PCDH9-202ENST00000377865 ZNF815PA8K554 130 aa7.08□□□□□ -1.28
PCDH9-202ENST00000377865 IGLV1-44P01699 117 aa7.08□□□□□ -1.28
PCDH9-202ENST00000377865 TMEM105Q8N8V8 129 aa7.08□□□□□ -1.28
PCDH9-202ENST00000377865 IGKV3-7A0A075B6H7 116 aa7.08□□□□□ -1.28
PCDH9-202ENST00000377865 A8MWV9 139 aa7.08□□□□□ -1.28
PCDH9-202ENST00000377865 OOSP1A8MZH6 123 aa7.08□□□□□ -1.28
PCDH9-202ENST00000377865 TIMM23O14925 209 aa7.08□□□□□ -1.28
PCDH9-202ENST00000377865 C2orf16Q68DN1 1984 aa7.08□□□□□ -1.28
PCDH9-202ENST00000377865 OVOL1O14753 267 aa7.08□□□□□ -1.28
PCDH9-202ENST00000377865 NCR2O95944 276 aa7.08□□□□□ -1.28
PCDH9-202ENST00000377865 DEFB125Q8N687 156 aa7.08□□□□□ -1.28
PCDH9-202ENST00000377865 BUB1B-PAK6H3BSN5 160 aa7.08□□□□□ -1.28
PCDH9-202ENST00000377865 TEX36Q5VZQ5 186 aa7.08□□□□□ -1.28
PCDH9-202ENST00000377865 LHFPL4Q7Z7J7 247 aa7.08□□□□□ -1.28
PCDH9-202ENST00000377865 DOCK9Q9BZ29 2069 aa7.07□□□□□ -1.28
PCDH9-202ENST00000377865 CCL25O15444 150 aa7.07□□□□□ -1.28
PCDH9-202ENST00000377865 AMN1Q8IY45 258 aa7.07□□□□□ -1.28
PCDH9-202ENST00000377865 C8orf31Q8N9H6 132 aa7.07□□□□□ -1.28
PCDH9-202ENST00000377865 DLX4Q92988 240 aaPredicted RBP7.07□□□□□ -1.28
PCDH9-202ENST00000377865 RNASE6Q93091 150 aaKnown RBP7.07□□□□□ -1.28
PCDH9-202ENST00000377865 TRBV19A0A075B6N1 114 aa7.07□□□□□ -1.28
PCDH9-202ENST00000377865 SH2D7A6NKC9 451 aaPredicted RBP7.07□□□□□ -1.28
PCDH9-202ENST00000377865 CD59P13987 128 aa7.07□□□□□ -1.28
PCDH9-202ENST00000377865 TAL2Q16559 108 aa7.07□□□□□ -1.28
PCDH9-202ENST00000377865 CLEC19AQ6UXS0 136 aa7.07□□□□□ -1.28
PCDH9-202ENST00000377865 ADAMTSL5Q6ZMM2 481 aa7.07□□□□□ -1.28
PCDH9-202ENST00000377865 NPIPB5A8MRT5 1133 aa7.07□□□□□ -1.28
PCDH9-202ENST00000377865 PF4V1P10720 104 aa7.07□□□□□ -1.28
PCDH9-202ENST00000377865 UCNP55089 124 aa7.07□□□□□ -1.28
PCDH9-202ENST00000377865 TRAV8-1A0A0A6YYK1 113 aa7.07□□□□□ -1.28
PCDH9-202ENST00000377865 PSMB11A5LHX3 300 aa7.07□□□□□ -1.28
PCDH9-202ENST00000377865 K7EP13 123 aa7.07□□□□□ -1.28
PCDH9-202ENST00000377865 TRGV3P03979 118 aa7.07□□□□□ -1.28
PCDH9-202ENST00000377865 ZNF134P52741 427 aa7.07□□□□□ -1.28
PCDH9-202ENST00000377865 ADIPOQQ15848 244 aa7.07□□□□□ -1.28
PCDH9-202ENST00000377865 TEX29Q8N6K0 151 aa7.07□□□□□ -1.28
PCDH9-202ENST00000377865 H3BRN7 92 aa7.06□□□□□ -1.28
PCDH9-202ENST00000377865 P0C879 139 aa7.06□□□□□ -1.28
PCDH9-202ENST00000377865 SNRPD3P62318 126 aaKnown RBP7.06□□□□□ -1.28
PCDH9-202ENST00000377865 C11orf53Q8IXP5 236 aa7.06□□□□□ -1.28
PCDH9-202ENST00000377865 TMEM158Q8WZ71 300 aa7.06□□□□□ -1.28
PCDH9-202ENST00000377865 F8W1H4 67 aa7.06□□□□□ -1.28
PCDH9-202ENST00000377865 KIR3DL3Q8N743 410 aa7.06□□□□□ -1.28
PCDH9-202ENST00000377865 IGHV3-66A0A0C4DH42 116 aa7.06□□□□□ -1.28
PCDH9-202ENST00000377865 A0A1W2PPM0 123 aa7.06□□□□□ -1.28
PCDH9-202ENST00000377865 RNASE4P34096 147 aaKnown RBP7.06□□□□□ -1.28
PCDH9-202ENST00000377865 PRR31Q5SQ13 230 aa7.06□□□□□ -1.28
PCDH9-202ENST00000377865 ZNF474Q6S9Z5 364 aaPredicted RBP7.06□□□□□ -1.28
PCDH9-202ENST00000377865 Q8N8P6 123 aa7.06□□□□□ -1.28
PCDH9-202ENST00000377865 NAA38Q9BRA0 125 aaKnown RBP7.06□□□□□ -1.28
PCDH9-202ENST00000377865 ANAPC13Q9BS18 74 aa7.06□□□□□ -1.28
PCDH9-202ENST00000377865 CKS1BP61024 79 aa7.06□□□□□ -1.28
PCDH9-202ENST00000377865 BOD1L2Q8IYS8 172 aa7.06□□□□□ -1.28
PCDH9-202ENST00000377865 VKORC1Q9BQB6 163 aa7.06□□□□□ -1.28
PCDH9-202ENST00000377865 SCRT2Q9NQ03 307 aa7.06□□□□□ -1.28
PCDH9-202ENST00000377865 MAJINQ3KP22 176 aa7.06□□□□□ -1.28
PCDH9-202ENST00000377865 YAE1D1Q9NRH1 226 aa7.06□□□□□ -1.28
PCDH9-202ENST00000377865 NPFFO15130 113 aa7.05□□□□□ -1.28
PCDH9-202ENST00000377865 TNFRSF6BO95407 300 aa7.05□□□□□ -1.28
PCDH9-202ENST00000377865 SCGB1A1P11684 91 aa7.05□□□□□ -1.28
PCDH9-202ENST00000377865 MRAP2Q96G30 205 aa7.05□□□□□ -1.28
PCDH9-202ENST00000377865 M0R1W7 72 aa7.05□□□□□ -1.28
PCDH9-202ENST00000377865 MINOS1Q5TGZ0 78 aa7.05□□□□□ -1.28
PCDH9-202ENST00000377865 MINOS1-NBL1R4GNA1 71 aa7.05□□□□□ -1.28
PCDH9-202ENST00000377865 IGHV3-35A0A0C4DH35 117 aa7.05□□□□□ -1.28
PCDH9-202ENST00000377865 SIGLEC15Q6ZMC9 328 aa7.05□□□□□ -1.28
PCDH9-202ENST00000377865 MCRIP2Q9BUT9 160 aaKnown RBP7.05□□□□□ -1.28
PCDH9-202ENST00000377865 GEMIN7Q9H840 131 aaKnown RBP7.05□□□□□ -1.28
PCDH9-202ENST00000377865 K7EM74 188 aa7.05□□□□□ -1.28
PCDH9-202ENST00000377865 PRSS2P07478 247 aa7.05□□□□□ -1.28
PCDH9-202ENST00000377865 FAM74A4Q5TZK3 123 aa7.05□□□□□ -1.28
PCDH9-202ENST00000377865 ZNF295-AS1Q8N0V1 137 aa7.05□□□□□ -1.28
PCDH9-202ENST00000377865 DPH3P1Q9H4G8 78 aa7.05□□□□□ -1.28
PCDH9-202ENST00000377865 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.04□□□□□ -1.28
PCDH9-202ENST00000377865 TRAV8-2A0A0B4J237 113 aa7.04□□□□□ -1.28
PCDH9-202ENST00000377865 TRAV8-4A0A0B4J246 113 aa7.04□□□□□ -1.28
PCDH9-202ENST00000377865 CEACAM4O75871 244 aa7.04□□□□□ -1.28
PCDH9-202ENST00000377865 TDRG1Q3Y452 100 aa7.04□□□□□ -1.28
PCDH9-202ENST00000377865 MRPL51Q4U2R6 128 aaKnown RBP7.04□□□□□ -1.28
PCDH9-202ENST00000377865 ZC2HC1BQ5TFG8 222 aa7.04□□□□□ -1.28
PCDH9-202ENST00000377865 DDB2Q92466 427 aa7.04□□□□□ -1.28
PCDH9-202ENST00000377865 PIMREGQ9BSJ6 248 aa7.04□□□□□ -1.28
PCDH9-202ENST00000377865 PRDM6Q9NQX0 595 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms