RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 ZNF546Q86UE3 836 aa8.43□□□□□ -1.06
SMARCE1-203ENST00000377808 UHRF2Q96PU4 802 aa8.43□□□□□ -1.06
SMARCE1-203ENST00000377808 C11orf68Q9H3H3 251 aaKnown RBP8.43□□□□□ -1.06
SMARCE1-203ENST00000377808 IGHV4-28A0A0C4DH34 117 aa8.42□□□□□ -1.06
SMARCE1-203ENST00000377808 FNDC10F2Z333 226 aa8.42□□□□□ -1.06
SMARCE1-203ENST00000377808 F6UB75 175 aa8.42□□□□□ -1.06
SMARCE1-203ENST00000377808 ISLRO14498 428 aa8.42□□□□□ -1.06
SMARCE1-203ENST00000377808 DEFA1P59665 94 aa8.42□□□□□ -1.06
SMARCE1-203ENST00000377808 DEFA3P59666 94 aa8.42□□□□□ -1.06
SMARCE1-203ENST00000377808 RAB32Q13637 225 aa8.42□□□□□ -1.06
SMARCE1-203ENST00000377808 IGFL4Q6B9Z1 124 aa8.42□□□□□ -1.06
SMARCE1-203ENST00000377808 CEMP1Q6PRD7 247 aaPredicted RBP8.42□□□□□ -1.06
SMARCE1-203ENST00000377808 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.42□□□□□ -1.06
SMARCE1-203ENST00000377808 NRARPQ7Z6K4 114 aa8.42□□□□□ -1.06
SMARCE1-203ENST00000377808 STX12Q86Y82 276 aa8.42□□□□□ -1.06
SMARCE1-203ENST00000377808 PHLDA1Q8WV24 401 aaPredicted RBP8.42□□□□□ -1.06
SMARCE1-203ENST00000377808 GPR82Q96P67 336 aa8.42□□□□□ -1.06
SMARCE1-203ENST00000377808 SHANK2-AS3Q9BTD1 123 aa8.42□□□□□ -1.06
SMARCE1-203ENST00000377808 GGACTQ9BVM4 153 aa8.42□□□□□ -1.06
SMARCE1-203ENST00000377808 C1QTNF4Q9BXJ3 329 aa8.42□□□□□ -1.06
SMARCE1-203ENST00000377808 SAV1Q9H4B6 383 aaPredicted RBP8.42□□□□□ -1.06
SMARCE1-203ENST00000377808 RPRMQ9NS64 109 aa8.42□□□□□ -1.06
SMARCE1-203ENST00000377808 KLK5Q9Y337 293 aaPredicted RBP8.42□□□□□ -1.06
SMARCE1-203ENST00000377808 TENM2Q9NT68 2774 aa8.42□□□□□ -1.06
SMARCE1-203ENST00000377808 HYDINQ4G0P3 5121 aa8.41□□□□□ -1.06
SMARCE1-203ENST00000377808 IGHV3OR16-12A0A075B7B8 117 aa8.41□□□□□ -1.06
SMARCE1-203ENST00000377808 UBE2L5PA0A1B0GUS4 154 aa8.41□□□□□ -1.06
SMARCE1-203ENST00000377808 INMT-MINDY4F8WBC2 141 aa8.41□□□□□ -1.06
SMARCE1-203ENST00000377808 AGPAT2O15120 278 aa8.41□□□□□ -1.06
SMARCE1-203ENST00000377808 COX7A2P2O60397 106 aa8.41□□□□□ -1.06
SMARCE1-203ENST00000377808 DEDDO75618 318 aa8.41□□□□□ -1.06
SMARCE1-203ENST00000377808 SIX6O95475 246 aa8.41□□□□□ -1.06
SMARCE1-203ENST00000377808 MIFP14174 115 aa8.41□□□□□ -1.06
SMARCE1-203ENST00000377808 RPL7P18124 248 aaKnown RBP8.41□□□□□ -1.06
SMARCE1-203ENST00000377808 IFITM3Q01628 133 aa8.41□□□□□ -1.06
SMARCE1-203ENST00000377808 LRRC37A5PQ49AS3 106 aa8.41□□□□□ -1.06
SMARCE1-203ENST00000377808 Q8NAQ8 132 aa8.41□□□□□ -1.06
SMARCE1-203ENST00000377808 LRRC20Q8TCA0 184 aa8.41□□□□□ -1.06
SMARCE1-203ENST00000377808 C20orf173Q96LM9 149 aa8.41□□□□□ -1.06
SMARCE1-203ENST00000377808 MFFQ9GZY8 342 aa8.41□□□□□ -1.06
SMARCE1-203ENST00000377808 ARV1Q9H2C2 271 aa8.41□□□□□ -1.06
SMARCE1-203ENST00000377808 BATF3Q9NR55 127 aa8.41□□□□□ -1.06
SMARCE1-203ENST00000377808 LY6G6CO95867 125 aa8.4□□□□□ -1.06
SMARCE1-203ENST00000377808 CAMLGP49069 296 aa8.4□□□□□ -1.06
SMARCE1-203ENST00000377808 PLP1P60201 277 aa8.4□□□□□ -1.06
SMARCE1-203ENST00000377808 BAXQ07812 192 aa8.4□□□□□ -1.06
SMARCE1-203ENST00000377808 RAB31Q13636 194 aa8.4□□□□□ -1.06
SMARCE1-203ENST00000377808 FAM78BQ5VT40 261 aa8.4□□□□□ -1.06
SMARCE1-203ENST00000377808 LINC00305Q7Z4B0 112 aa8.4□□□□□ -1.06
SMARCE1-203ENST00000377808 RNF182Q8N6D2 247 aa8.4□□□□□ -1.06
SMARCE1-203ENST00000377808 ZNF738Q8NE65 137 aa8.4□□□□□ -1.06
SMARCE1-203ENST00000377808 MGST2Q99735 147 aa8.4□□□□□ -1.06
SMARCE1-203ENST00000377808 LYRM2Q9NU23 88 aaPredicted RBP8.4□□□□□ -1.06
SMARCE1-203ENST00000377808 UQCC1Q9NVA1 299 aa8.4□□□□□ -1.06
SMARCE1-203ENST00000377808 IGSF23A1L1A6 192 aa8.39□□□□□ -1.07
SMARCE1-203ENST00000377808 ZNF705EA8MWA4 302 aaPredicted RBP8.39□□□□□ -1.07
SMARCE1-203ENST00000377808 SSNA1O43805 119 aa8.39□□□□□ -1.07
SMARCE1-203ENST00000377808 PRAF2O60831 178 aa8.39□□□□□ -1.07
SMARCE1-203ENST00000377808 RLN2P04090 185 aa8.39□□□□□ -1.07
SMARCE1-203ENST00000377808 SNRPCP09234 159 aaKnown RBP8.39□□□□□ -1.07
SMARCE1-203ENST00000377808 RBMY1A1P0DJD3 496 aaKnown RBP8.39□□□□□ -1.07
SMARCE1-203ENST00000377808 RBMY1CP0DJD4 496 aa8.39□□□□□ -1.07
SMARCE1-203ENST00000377808 SULT1A1P50225 295 aa8.39□□□□□ -1.07
SMARCE1-203ENST00000377808 HBG1P69891 147 aa8.39□□□□□ -1.07
SMARCE1-203ENST00000377808 HBG2P69892 147 aa8.39□□□□□ -1.07
SMARCE1-203ENST00000377808 PSG9Q00887 426 aa8.39□□□□□ -1.07
SMARCE1-203ENST00000377808 RBMY1FQ15415 496 aaKnown RBP8.39□□□□□ -1.07
SMARCE1-203ENST00000377808 PXDC1Q5TGL8 231 aa8.39□□□□□ -1.07
SMARCE1-203ENST00000377808 SPATA31B1PQ5VZV4 182 aa8.39□□□□□ -1.07
SMARCE1-203ENST00000377808 TMEM252Q8N6L7 170 aa8.39□□□□□ -1.07
SMARCE1-203ENST00000377808 CSNK1G2-AS1Q8NCQ2 148 aa8.39□□□□□ -1.07
SMARCE1-203ENST00000377808 SLC35B3Q9H1N7 401 aa8.39□□□□□ -1.07
SMARCE1-203ENST00000377808 X6R8D5 127 aa8.39□□□□□ -1.07
SMARCE1-203ENST00000377808 ALMS1Q8TCU4 4167 aa8.38□□□□□ -1.07
SMARCE1-203ENST00000377808 A0A0J9YX75 114 aa8.38□□□□□ -1.07
SMARCE1-203ENST00000377808 ZNF705DP0CH99 300 aaPredicted RBP8.38□□□□□ -1.07
SMARCE1-203ENST00000377808 ZNF705BP0CI00 300 aaPredicted RBP8.38□□□□□ -1.07
SMARCE1-203ENST00000377808 PRB4P10163 310 aaPredicted RBP8.38□□□□□ -1.07
SMARCE1-203ENST00000377808 FGF7P21781 194 aa8.38□□□□□ -1.07
SMARCE1-203ENST00000377808 S100A11P31949 105 aa8.38□□□□□ -1.07
SMARCE1-203ENST00000377808 EMP1P54849 157 aa8.38□□□□□ -1.07
SMARCE1-203ENST00000377808 C10orf113Q5VZT2 155 aa8.38□□□□□ -1.07
SMARCE1-203ENST00000377808 MIC13Q5XKP0 118 aa8.38□□□□□ -1.07
SMARCE1-203ENST00000377808 PATE2Q6UY27 113 aa8.38□□□□□ -1.07
SMARCE1-203ENST00000377808 Q6ZRG5 221 aa8.38□□□□□ -1.07
SMARCE1-203ENST00000377808 C17orf77Q96MU5 243 aa8.38□□□□□ -1.07
SMARCE1-203ENST00000377808 C11orf1Q9H5F2 150 aa8.38□□□□□ -1.07
SMARCE1-203ENST00000377808 RNF24Q9Y225 148 aa8.38□□□□□ -1.07
SMARCE1-203ENST00000377808 ELOA3CA0A087WX78 387 aaPredicted RBP8.37□□□□□ -1.07
SMARCE1-203ENST00000377808 TRAV8-2A0A0B4J237 113 aa8.37□□□□□ -1.07
SMARCE1-203ENST00000377808 HLA-DMBP28068 263 aa8.37□□□□□ -1.07
SMARCE1-203ENST00000377808 B2MP61769 119 aa8.37□□□□□ -1.07
SMARCE1-203ENST00000377808 ZNF767PQ75MW2 155 aa8.37□□□□□ -1.07
SMARCE1-203ENST00000377808 ZNF709Q8N972 641 aa8.37□□□□□ -1.07
SMARCE1-203ENST00000377808 NMES1Q9C002 83 aa8.37□□□□□ -1.07
SMARCE1-203ENST00000377808 PPP1R14DQ9NXH3 145 aa8.37□□□□□ -1.07
SMARCE1-203ENST00000377808 WDR83OSQ9Y284 106 aa8.37□□□□□ -1.07
SMARCE1-203ENST00000377808 GOLT1BQ9Y3E0 138 aa8.37□□□□□ -1.07
SMARCE1-203ENST00000377808 A0A087X0K7 114 aa8.36□□□□□ -1.07
SMARCE1-203ENST00000377808 E5RGE8 158 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms