RNA–Protein interactions for RNA: ENST00000377617.7

ATXN2-201, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-201ENST00000377617 CEND1Q8N111 149 aa13.71□□□□□ -0.21
ATXN2-201ENST00000377617 V9GYV3 84 aa13.71□□□□□ -0.21
ATXN2-201ENST00000377617 C17orf100A8MU93 164 aa13.71□□□□□ -0.21
ATXN2-201ENST00000377617 CENPVQ7Z7K6 275 aaPredicted RBP13.71□□□□□ -0.21
ATXN2-201ENST00000377617 SP7Q8TDD2 431 aaPredicted RBP13.71□□□□□ -0.21
ATXN2-201ENST00000377617 RNASE8Q8TDE3 154 aaKnown RBP13.71□□□□□ -0.21
ATXN2-201ENST00000377617 GLMPQ8WWB7 406 aa13.71□□□□□ -0.21
ATXN2-201ENST00000377617 UBL5Q9BZL1 73 aa13.71□□□□□ -0.22
ATXN2-201ENST00000377617 FGF6P10767 208 aa13.7□□□□□ -0.22
ATXN2-201ENST00000377617 TCF15Q12870 199 aa13.7□□□□□ -0.22
ATXN2-201ENST00000377617 PDE6HQ13956 83 aa13.7□□□□□ -0.22
ATXN2-201ENST00000377617 ITLN2Q8WWU7 325 aaPredicted RBP13.7□□□□□ -0.22
ATXN2-201ENST00000377617 SMKR1H3BMG3 65 aa13.7□□□□□ -0.22
ATXN2-201ENST00000377617 LYPD6BQ8NI32 183 aa13.7□□□□□ -0.22
ATXN2-201ENST00000377617 UBR3Q6ZT12 1888 aa13.7□□□□□ -0.22
ATXN2-201ENST00000377617 TMEM258P61165 79 aa13.7□□□□□ -0.22
ATXN2-201ENST00000377617 C9orf139Q6ZV77 190 aa13.7□□□□□ -0.22
ATXN2-201ENST00000377617 SPACA3Q8IXA5 215 aa13.69□□□□□ -0.22
ATXN2-201ENST00000377617 ANKRD29Q8N6D5 301 aa13.69□□□□□ -0.22
ATXN2-201ENST00000377617 LINC00477Q96M19 166 aa13.69□□□□□ -0.22
ATXN2-201ENST00000377617 PATE3B3GLJ2 98 aa13.69□□□□□ -0.22
ATXN2-201ENST00000377617 IGHV1-2P23083 117 aa13.69□□□□□ -0.22
ATXN2-201ENST00000377617 C10orf55Q5SWW7 151 aa13.69□□□□□ -0.22
ATXN2-201ENST00000377617 PRIMA1Q86XR5 153 aa13.69□□□□□ -0.22
ATXN2-201ENST00000377617 C15orf53Q8NAA6 179 aa13.69□□□□□ -0.22
ATXN2-201ENST00000377617 LINC00479Q96M42 142 aa13.69□□□□□ -0.22
ATXN2-201ENST00000377617 SRRM5B3KS81 715 aa13.69□□□□□ -0.22
ATXN2-201ENST00000377617 HLA-DMBP28068 263 aa13.69□□□□□ -0.22
ATXN2-201ENST00000377617 ZNF625Q96I27 306 aaPredicted RBP13.69□□□□□ -0.22
ATXN2-201ENST00000377617 RNF5Q99942 180 aa13.69□□□□□ -0.22
ATXN2-201ENST00000377617 ANAPC10Q9UM13 185 aa13.69□□□□□ -0.22
ATXN2-201ENST00000377617 IGLV3-12A0A075B6K2 115 aa13.69□□□□□ -0.22
ATXN2-201ENST00000377617 LOC102723996A0A087X1L8 192 aa13.69□□□□□ -0.22
ATXN2-201ENST00000377617 SLC25A16P16260 332 aa13.69□□□□□ -0.22
ATXN2-201ENST00000377617 CDPF1Q6NVV7 123 aa13.69□□□□□ -0.22
ATXN2-201ENST00000377617 Q8N8P6 123 aa13.69□□□□□ -0.22
ATXN2-201ENST00000377617 COL5A3P25940 1745 aaPredicted RBP13.68□□□□□ -0.22
ATXN2-201ENST00000377617 SMIM27A0A1W2PRY6 76 aa13.68□□□□□ -0.22
ATXN2-201ENST00000377617 SAP25Q8TEE9 199 aa13.68□□□□□ -0.22
ATXN2-201ENST00000377617 SHANK3Q9BYB0 1731 aa13.68□□□□□ -0.22
ATXN2-201ENST00000377617 TEX48A0A1B0GUV7 120 aa13.68□□□□□ -0.22
ATXN2-201ENST00000377617 SIGLEC15Q6ZMC9 328 aa13.68□□□□□ -0.22
ATXN2-201ENST00000377617 SMRP1Q8NCR6 262 aa13.68□□□□□ -0.22
ATXN2-201ENST00000377617 PAPPA2Q9BXP8 1791 aa13.68□□□□□ -0.22
ATXN2-201ENST00000377617 PRSS46E5RG02 174 aa13.68□□□□□ -0.22
ATXN2-201ENST00000377617 TIAF1O95411 115 aa13.68□□□□□ -0.22
ATXN2-201ENST00000377617 PSPNO60542 156 aa13.68□□□□□ -0.22
ATXN2-201ENST00000377617 PYGO2Q9BRQ0 406 aa13.68□□□□□ -0.22
ATXN2-201ENST00000377617 PDLIM4P50479 330 aa13.67□□□□□ -0.22
ATXN2-201ENST00000377617 C11orf52Q96A22 123 aa13.67□□□□□ -0.22
ATXN2-201ENST00000377617 ZNF415Q09FC8 603 aa13.67□□□□□ -0.22
ATXN2-201ENST00000377617 TMEM126AQ9H061 195 aa13.67□□□□□ -0.22
ATXN2-201ENST00000377617 TRAV3A0A0B4J244 114 aa13.67□□□□□ -0.22
ATXN2-201ENST00000377617 HAX1O00165 279 aa13.67□□□□□ -0.22
ATXN2-201ENST00000377617 CELA3BP08861 270 aa13.67□□□□□ -0.22
ATXN2-201ENST00000377617 AMTNQ6UX39 209 aa13.67□□□□□ -0.22
ATXN2-201ENST00000377617 C14orf178Q8N769 122 aaPredicted RBP13.67□□□□□ -0.22
ATXN2-201ENST00000377617 A0A1W2PR77 199 aa13.66□□□□□ -0.22
ATXN2-201ENST00000377617 PAX8Q06710 450 aa13.66□□□□□ -0.22
ATXN2-201ENST00000377617 C2orf66Q6UXQ4 117 aa13.66□□□□□ -0.22
ATXN2-201ENST00000377617 TMEM141Q96I45 108 aa13.66□□□□□ -0.22
ATXN2-201ENST00000377617 IGHG4P01861 327 aa13.66□□□□□ -0.22
ATXN2-201ENST00000377617 CELA3AP09093 270 aa13.66□□□□□ -0.22
ATXN2-201ENST00000377617 ZNF726P1Q15940 193 aa13.66□□□□□ -0.22
ATXN2-201ENST00000377617 DPH3Q96FX2 82 aa13.66□□□□□ -0.22
ATXN2-201ENST00000377617 LINC00473A8K010 186 aa13.66□□□□□ -0.22
ATXN2-201ENST00000377617 C12orf74Q32Q52 190 aa13.66□□□□□ -0.22
ATXN2-201ENST00000377617 DEFB123Q8N688 67 aa13.66□□□□□ -0.22
ATXN2-201ENST00000377617 NEU4Q8WWR8 484 aaPredicted RBP13.66□□□□□ -0.22
ATXN2-201ENST00000377617 CHCHD5Q9BSY4 110 aa13.66□□□□□ -0.22
ATXN2-201ENST00000377617 SPXQ9BT56 116 aa13.66□□□□□ -0.22
ATXN2-201ENST00000377617 RNASE2P10153 161 aaKnown RBP13.66□□□□□ -0.22
ATXN2-201ENST00000377617 CFHR2P36980 270 aa13.66□□□□□ -0.22
ATXN2-201ENST00000377617 PAX9P55771 341 aa13.66□□□□□ -0.22
ATXN2-201ENST00000377617 PRSS57Q6UWY2 283 aa13.66□□□□□ -0.22
ATXN2-201ENST00000377617 CYYR1Q96J86 154 aa13.66□□□□□ -0.22
ATXN2-201ENST00000377617 F8VRH5 84 aa13.65□□□□□ -0.22
ATXN2-201ENST00000377617 MRPL14Q6P1L8 145 aaKnown RBP13.65□□□□□ -0.22
ATXN2-201ENST00000377617 C1orf43Q9BWL3 253 aa13.65□□□□□ -0.22
ATXN2-201ENST00000377617 PNRC2Q9NPJ4 139 aaKnown RBP13.65□□□□□ -0.22
ATXN2-201ENST00000377617 WNK3Q9BYP7 1800 aa13.65□□□□□ -0.22
ATXN2-201ENST00000377617 RPL36AP83881 106 aaKnown RBP13.65□□□□□ -0.22
ATXN2-201ENST00000377617 Q8TAT8 98 aa13.65□□□□□ -0.22
ATXN2-201ENST00000377617 RPL36ALQ969Q0 106 aaKnown RBP13.65□□□□□ -0.22
ATXN2-201ENST00000377617 MYO16Q9Y6X6 1858 aa13.65□□□□□ -0.22
ATXN2-201ENST00000377617 COL24A1Q17RW2 1714 aa13.65□□□□□ -0.22
ATXN2-201ENST00000377617 NPYP01303 97 aa13.65□□□□□ -0.22
ATXN2-201ENST00000377617 ZNF474Q6S9Z5 364 aaPredicted RBP13.64□□□□□ -0.23
ATXN2-201ENST00000377617 VOPP1Q96AW1 172 aa13.64□□□□□ -0.23
ATXN2-201ENST00000377617 MORN5Q5VZ52 161 aa13.64□□□□□ -0.23
ATXN2-201ENST00000377617 MAFAQ8NHW3 353 aaPredicted RBP13.64□□□□□ -0.23
ATXN2-201ENST00000377617 MRAPQ8TCY5 172 aa13.64□□□□□ -0.23
ATXN2-201ENST00000377617 NTN5Q8WTR8 489 aaPredicted RBP13.64□□□□□ -0.23
ATXN2-201ENST00000377617 PEMTQ9UBM1 199 aa13.64□□□□□ -0.23
ATXN2-201ENST00000377617 IGHV3-11P01762 117 aa13.64□□□□□ -0.23
ATXN2-201ENST00000377617 ACYP1P07311 99 aa13.64□□□□□ -0.23
ATXN2-201ENST00000377617 VWC2Q2TAL6 325 aa13.64□□□□□ -0.23
ATXN2-201ENST00000377617 TMEM75Q8N9X5 138 aa13.64□□□□□ -0.23
ATXN2-201ENST00000377617 PRADC1Q9BSG0 188 aa13.64□□□□□ -0.23
ATXN2-201ENST00000377617 CACNA1GO43497 2377 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms