RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 HILPDAQ9Y5L2 63 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 hDV102S1A0JD36 115 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 TEX22C9J3V5 150 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 HTR1DP28221 377 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 FOXE3Q13461 319 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 TNFRSF19Q9NS68 423 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 MRPL27Q9P0M9 148 aaKnown RBP11.12□□□□□ -0.63
MSH5-202ENST00000375740 A0A1W2PRE2 83 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 IGLV2-8P01709 118 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 PYYP10082 97 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 MGST1P10620 155 aaKnown RBP11.12□□□□□ -0.63
MSH5-202ENST00000375740 UBE2L3P68036 154 aaKnown RBP11.12□□□□□ -0.63
MSH5-202ENST00000375740 KLRD1Q13241 179 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 LINC00173Q6ZV60 143 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 OR11H6Q8NGC7 330 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 RNF5Q99942 180 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 MCRIP2Q9BUT9 160 aaKnown RBP11.12□□□□□ -0.63
MSH5-202ENST00000375740 SSBP4Q9BWG4 385 aaPredicted RBP11.12□□□□□ -0.63
MSH5-202ENST00000375740 DPM3Q9P2X0 92 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 HRNRQ86YZ3 2850 aaPredicted RBP11.11□□□□□ -0.63
MSH5-202ENST00000375740 MOSP00540 346 aa11.11□□□□□ -0.63
MSH5-202ENST00000375740 HLA-DQA1P01909 254 aa11.11□□□□□ -0.63
MSH5-202ENST00000375740 PLGLAQ15195 96 aa11.11□□□□□ -0.63
MSH5-202ENST00000375740 BVES-AS1Q5T3Y7 98 aa11.11□□□□□ -0.63
MSH5-202ENST00000375740 RNASEKQ6P5S7 137 aaKnown RBP11.11□□□□□ -0.63
MSH5-202ENST00000375740 DTX2Q86UW9 622 aa11.11□□□□□ -0.63
MSH5-202ENST00000375740 LY96Q9Y6Y9 160 aa11.11□□□□□ -0.63
MSH5-202ENST00000375740 A0A1W2PRD5 423 aa11.11□□□□□ -0.63
MSH5-202ENST00000375740 A0A1W2PRF3 423 aa11.11□□□□□ -0.63
MSH5-202ENST00000375740 A0A1W2PRM7 423 aa11.11□□□□□ -0.63
MSH5-202ENST00000375740 GAGE12BA1L429 117 aa11.11□□□□□ -0.63
MSH5-202ENST00000375740 UBE2G1P62253 170 aa11.11□□□□□ -0.63
MSH5-202ENST00000375740 LHFPL4Q7Z7J7 247 aa11.11□□□□□ -0.63
MSH5-202ENST00000375740 SRSF12Q8WXF0 261 aaKnown RBP11.11□□□□□ -0.63
MSH5-202ENST00000375740 F11RQ9Y624 299 aaKnown RBP11.11□□□□□ -0.63
MSH5-202ENST00000375740 TRAV8-6A0A0B4J262 113 aa11.1□□□□□ -0.63
MSH5-202ENST00000375740 ORM2P19652 201 aa11.1□□□□□ -0.63
MSH5-202ENST00000375740 CD24P25063 80 aa11.1□□□□□ -0.63
MSH5-202ENST00000375740 IBA57Q5T440 356 aaKnown RBP11.1□□□□□ -0.63
MSH5-202ENST00000375740 LINC00479Q96M42 142 aa11.1□□□□□ -0.63
MSH5-202ENST00000375740 PAXXQ9BUH6 204 aa11.1□□□□□ -0.63
MSH5-202ENST00000375740 RPH3ALQ9UNE2 315 aa11.1□□□□□ -0.63
MSH5-202ENST00000375740 SMIM27A0A1W2PRY6 76 aa11.1□□□□□ -0.63
MSH5-202ENST00000375740 M0R1W7 72 aa11.1□□□□□ -0.63
MSH5-202ENST00000375740 NDUFS7O75251 213 aa11.1□□□□□ -0.63
MSH5-202ENST00000375740 PSG9Q00887 426 aa11.1□□□□□ -0.63
MSH5-202ENST00000375740 PRR27Q6MZM9 219 aa11.1□□□□□ -0.63
MSH5-202ENST00000375740 LINC00305Q7Z4B0 112 aa11.1□□□□□ -0.63
MSH5-202ENST00000375740 TMEM116Q8NCL8 245 aa11.1□□□□□ -0.63
MSH5-202ENST00000375740 URB1-AS1Q96HZ7 61 aa11.1□□□□□ -0.63
MSH5-202ENST00000375740 TRGV9Q99603 122 aa11.1□□□□□ -0.63
MSH5-202ENST00000375740 MEGF9Q9H1U4 602 aa11.1□□□□□ -0.63
MSH5-202ENST00000375740 OSTCQ9NRP0 149 aa11.1□□□□□ -0.63
MSH5-202ENST00000375740 TACC2O95359 2948 aa11.09□□□□□ -0.63
MSH5-202ENST00000375740 PRTN3P24158 256 aa11.09□□□□□ -0.63
MSH5-202ENST00000375740 OR1B1Q8NGR6 318 aa11.09□□□□□ -0.63
MSH5-202ENST00000375740 CFHR4Q92496 578 aa11.09□□□□□ -0.63
MSH5-202ENST00000375740 OR4C46A6NHA9 309 aa11.09□□□□□ -0.63
MSH5-202ENST00000375740 CORTO00230 105 aa11.09□□□□□ -0.63
MSH5-202ENST00000375740 CNIH1O95406 144 aa11.09□□□□□ -0.63
MSH5-202ENST00000375740 DEFB125Q8N687 156 aa11.09□□□□□ -0.63
MSH5-202ENST00000375740 UQCRFS1P47985 274 aa11.08□□□□□ -0.64
MSH5-202ENST00000375740 ZNF331Q9NQX6 463 aaPredicted RBP11.08□□□□□ -0.64
MSH5-202ENST00000375740 ODF3BA8MYP8 253 aa11.08□□□□□ -0.64
MSH5-202ENST00000375740 CEACAM3P40198 252 aa11.08□□□□□ -0.64
MSH5-202ENST00000375740 TIGITQ495A1 244 aa11.08□□□□□ -0.64
MSH5-202ENST00000375740 FXYD5Q96DB9 178 aa11.08□□□□□ -0.64
MSH5-202ENST00000375740 UBTD1Q9HAC8 227 aa11.08□□□□□ -0.64
MSH5-202ENST00000375740 A0A087X0K7 114 aa11.07□□□□□ -0.64
MSH5-202ENST00000375740 ISLRO14498 428 aa11.07□□□□□ -0.64
MSH5-202ENST00000375740 ZFP36P26651 326 aaKnown RBP11.07□□□□□ -0.64
MSH5-202ENST00000375740 PAX2Q02962 417 aa11.07□□□□□ -0.64
MSH5-202ENST00000375740 CHD8Q9HCK8 2581 aa11.07□□□□□ -0.64
MSH5-202ENST00000375740 IZUMO1RA6ND01 250 aa11.07□□□□□ -0.64
MSH5-202ENST00000375740 NBR2O15453 112 aa11.07□□□□□ -0.64
MSH5-202ENST00000375740 ITLN2Q8WWU7 325 aaPredicted RBP11.07□□□□□ -0.64
MSH5-202ENST00000375740 PERPQ96FX8 193 aa11.07□□□□□ -0.64
MSH5-202ENST00000375740 NCOR2Q9Y618 2525 aa11.06□□□□□ -0.64
MSH5-202ENST00000375740 CAMPP49913 170 aa11.06□□□□□ -0.64
MSH5-202ENST00000375740 FAM120AOSQ5T036 256 aa11.06□□□□□ -0.64
MSH5-202ENST00000375740 ZNF329Q86UD4 541 aa11.06□□□□□ -0.64
MSH5-202ENST00000375740 HIVEP3Q5T1R4 2406 aa11.06□□□□□ -0.64
MSH5-202ENST00000375740 VWC2LB2RUY7 222 aa11.06□□□□□ -0.64
MSH5-202ENST00000375740 I3L2K1 104 aa11.06□□□□□ -0.64
MSH5-202ENST00000375740 GNLYP22749 145 aa11.06□□□□□ -0.64
MSH5-202ENST00000375740 HES1Q14469 280 aa11.06□□□□□ -0.64
MSH5-202ENST00000375740 VMO1Q7Z5L0 202 aa11.06□□□□□ -0.64
MSH5-202ENST00000375740 IGF2BP2-AS1Q96M15 143 aa11.06□□□□□ -0.64
MSH5-202ENST00000375740 TMEM70Q9BUB7 260 aa11.06□□□□□ -0.64
MSH5-202ENST00000375740 SNAI2O43623 268 aa11.05□□□□□ -0.64
MSH5-202ENST00000375740 NPBQ8NG41 125 aa11.05□□□□□ -0.64
MSH5-202ENST00000375740 SPTBN1Q01082 2364 aaKnown RBP11.05□□□□□ -0.64
MSH5-202ENST00000375740 C19orf84I3L1E1 186 aa11.05□□□□□ -0.64
MSH5-202ENST00000375740 COX19Q49B96 90 aa11.05□□□□□ -0.64
MSH5-202ENST00000375740 C1orf122Q6ZSJ8 110 aa11.05□□□□□ -0.64
MSH5-202ENST00000375740 DYNAPQ8N1N2 210 aa11.05□□□□□ -0.64
MSH5-202ENST00000375740 NUP35Q8NFH5 326 aa11.05□□□□□ -0.64
MSH5-202ENST00000375740 PMCHL2Q9BQD1 86 aa11.05□□□□□ -0.64
MSH5-202ENST00000375740 SRSF8Q9BRL6 282 aaKnown RBP11.05□□□□□ -0.64
MSH5-202ENST00000375740 K7ERU9 68 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms