RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 C20orf173Q96LM9 149 aa11.72□□□□□ -0.53
C11orf88-202ENST00000375618 RSG1Q9BU20 258 aa11.72□□□□□ -0.53
C11orf88-202ENST00000375618 SLC25A31Q9H0C2 315 aa11.72□□□□□ -0.53
C11orf88-202ENST00000375618 MED28Q9H204 178 aa11.72□□□□□ -0.53
C11orf88-202ENST00000375618 ARV1Q9H2C2 271 aa11.72□□□□□ -0.53
C11orf88-202ENST00000375618 AGRNO00468 2067 aa11.71□□□□□ -0.53
C11orf88-202ENST00000375618 LYL1P12980 280 aa11.71□□□□□ -0.53
C11orf88-202ENST00000375618 BAXQ07812 192 aa11.71□□□□□ -0.53
C11orf88-202ENST00000375618 ACTL10Q5JWF8 245 aa11.71□□□□□ -0.53
C11orf88-202ENST00000375618 GDF5OSQ5U4N7 250 aa11.71□□□□□ -0.53
C11orf88-202ENST00000375618 SEPSECSQ9HD40 501 aaKnown RBP11.71□□□□□ -0.53
C11orf88-202ENST00000375618 TRAV8-2A0A0B4J237 113 aa11.7□□□□□ -0.54
C11orf88-202ENST00000375618 C4BPBP20851 252 aa11.7□□□□□ -0.54
C11orf88-202ENST00000375618 IGFL4Q6B9Z1 124 aa11.7□□□□□ -0.54
C11orf88-202ENST00000375618 Q6ZWC4 215 aa11.7□□□□□ -0.54
C11orf88-202ENST00000375618 CHAC2Q8WUX2 184 aa11.7□□□□□ -0.54
C11orf88-202ENST00000375618 CSTL1Q9H114 145 aa11.7□□□□□ -0.54
C11orf88-202ENST00000375618 HSPB11Q9Y547 144 aa11.7□□□□□ -0.54
C11orf88-202ENST00000375618 UBE2CO00762 179 aa11.69□□□□□ -0.54
C11orf88-202ENST00000375618 RPL12P30050 165 aaKnown RBP11.69□□□□□ -0.54
C11orf88-202ENST00000375618 GALR1P47211 349 aa11.69□□□□□ -0.54
C11orf88-202ENST00000375618 RPL29P47914 159 aaKnown RBP11.69□□□□□ -0.54
C11orf88-202ENST00000375618 PSMB3P49720 205 aa11.69□□□□□ -0.54
C11orf88-202ENST00000375618 SNRPD3P62318 126 aaKnown RBP11.69□□□□□ -0.54
C11orf88-202ENST00000375618 PXDC1Q5TGL8 231 aa11.69□□□□□ -0.54
C11orf88-202ENST00000375618 LINC00305Q7Z4B0 112 aa11.69□□□□□ -0.54
C11orf88-202ENST00000375618 STHQ8IWL8 128 aa11.69□□□□□ -0.54
C11orf88-202ENST00000375618 RNF183Q96D59 192 aa11.69□□□□□ -0.54
C11orf88-202ENST00000375618 LINC00052Q96N35 136 aa11.69□□□□□ -0.54
C11orf88-202ENST00000375618 NPCDR1Q9BY65 106 aa11.69□□□□□ -0.54
C11orf88-202ENST00000375618 SMIM3Q9BZL3 60 aa11.69□□□□□ -0.54
C11orf88-202ENST00000375618 WFDC1Q9HC57 220 aa11.69□□□□□ -0.54
C11orf88-202ENST00000375618 SLC39A9Q9NUM3 307 aa11.69□□□□□ -0.54
C11orf88-202ENST00000375618 PXMP4Q9Y6I8 212 aa11.69□□□□□ -0.54
C11orf88-202ENST00000375618 TRAV5A0A0B4J249 113 aa11.68□□□□□ -0.54
C11orf88-202ENST00000375618 SPRY2O43597 315 aa11.68□□□□□ -0.54
C11orf88-202ENST00000375618 COX7A2P2O60397 106 aa11.68□□□□□ -0.54
C11orf88-202ENST00000375618 SNRPCP09234 159 aaKnown RBP11.68□□□□□ -0.54
C11orf88-202ENST00000375618 B2MP61769 119 aa11.68□□□□□ -0.54
C11orf88-202ENST00000375618 RAB31Q13636 194 aa11.68□□□□□ -0.54
C11orf88-202ENST00000375618 GCSAMLQ5JQS6 135 aa11.68□□□□□ -0.54
C11orf88-202ENST00000375618 GPR82Q96P67 336 aa11.68□□□□□ -0.54
C11orf88-202ENST00000375618 WDR61Q9GZS3 305 aaKnown RBP11.68□□□□□ -0.54
C11orf88-202ENST00000375618 F6UB75 175 aa11.67□□□□□ -0.54
C11orf88-202ENST00000375618 H3BMM0 161 aa11.67□□□□□ -0.54
C11orf88-202ENST00000375618 ISLRO14498 428 aa11.67□□□□□ -0.54
C11orf88-202ENST00000375618 CA1P00915 261 aaPredicted RBP11.67□□□□□ -0.54
C11orf88-202ENST00000375618 PET100P0DJ07 73 aa11.67□□□□□ -0.54
C11orf88-202ENST00000375618 PRB4P10163 310 aaPredicted RBP11.67□□□□□ -0.54
C11orf88-202ENST00000375618 RPL7P18124 248 aaKnown RBP11.67□□□□□ -0.54
C11orf88-202ENST00000375618 HLA-DMBP28068 263 aa11.67□□□□□ -0.54
C11orf88-202ENST00000375618 C10orf113Q5VZT2 155 aa11.67□□□□□ -0.54
C11orf88-202ENST00000375618 RNF182Q8N6D2 247 aa11.67□□□□□ -0.54
C11orf88-202ENST00000375618 ATP5SQ99766 215 aa11.67□□□□□ -0.54
C11orf88-202ENST00000375618 TP53TG1Q9Y2A0 90 aa11.67□□□□□ -0.54
C11orf88-202ENST00000375618 RFNGQ9Y644 331 aa11.67□□□□□ -0.54
C11orf88-202ENST00000375618 ELOA3CA0A087WX78 387 aaPredicted RBP11.66□□□□□ -0.54
C11orf88-202ENST00000375618 A0A087X0K7 114 aa11.66□□□□□ -0.54
C11orf88-202ENST00000375618 G3V3Q6 166 aa11.66□□□□□ -0.54
C11orf88-202ENST00000375618 MPDU1O75352 247 aa11.66□□□□□ -0.54
C11orf88-202ENST00000375618 GIPP09681 153 aaPredicted RBP11.66□□□□□ -0.54
C11orf88-202ENST00000375618 HLA-DRB4P13762 266 aa11.66□□□□□ -0.54
C11orf88-202ENST00000375618 ID1P41134 155 aa11.66□□□□□ -0.54
C11orf88-202ENST00000375618 C16orf92Q96LL3 132 aa11.66□□□□□ -0.54
C11orf88-202ENST00000375618 DNAJC4Q9NNZ3 241 aa11.66□□□□□ -0.54
C11orf88-202ENST00000375618 HLA-DRB4X5D2U9 266 aa11.66□□□□□ -0.54
C11orf88-202ENST00000375618 DNAH7Q8WXX0 4024 aa11.66□□□□□ -0.54
C11orf88-202ENST00000375618 H3BTX0 84 aa11.65□□□□□ -0.54
C11orf88-202ENST00000375618 ATF4P18848 351 aaPredicted RBP11.65□□□□□ -0.54
C11orf88-202ENST00000375618 MEOX2P50222 304 aa11.65□□□□□ -0.54
C11orf88-202ENST00000375618 FGL1Q08830 312 aa11.65□□□□□ -0.54
C11orf88-202ENST00000375618 SPATA31B1PQ5VZV4 182 aa11.65□□□□□ -0.54
C11orf88-202ENST00000375618 Q6ZRG5 221 aa11.65□□□□□ -0.54
C11orf88-202ENST00000375618 MUC7Q8TAX7 377 aa11.65□□□□□ -0.54
C11orf88-202ENST00000375618 SAV1Q9H4B6 383 aaPredicted RBP11.65□□□□□ -0.54
C11orf88-202ENST00000375618 H3BQ15 152 aa11.64□□□□□ -0.55
C11orf88-202ENST00000375618 SLC17A3O00476 420 aa11.64□□□□□ -0.55
C11orf88-202ENST00000375618 IGKV3-20P01619 116 aa11.64□□□□□ -0.55
C11orf88-202ENST00000375618 IGLC2P0DOY2 106 aa11.64□□□□□ -0.55
C11orf88-202ENST00000375618 S100A7P31151 101 aa11.64□□□□□ -0.55
C11orf88-202ENST00000375618 FOXI2Q6ZQN5 318 aa11.64□□□□□ -0.55
C11orf88-202ENST00000375618 CSNK1G2-AS1Q8NCQ2 148 aa11.64□□□□□ -0.55
C11orf88-202ENST00000375618 CLEC5AQ9NY25 188 aa11.64□□□□□ -0.55
C11orf88-202ENST00000375618 A0A0J9YX75 114 aa11.63□□□□□ -0.55
C11orf88-202ENST00000375618 ZNF705DP0CH99 300 aaPredicted RBP11.63□□□□□ -0.55
C11orf88-202ENST00000375618 ZNF705BP0CI00 300 aaPredicted RBP11.63□□□□□ -0.55
C11orf88-202ENST00000375618 SPP1P10451 314 aa11.63□□□□□ -0.55
C11orf88-202ENST00000375618 FXYD7P58549 80 aa11.63□□□□□ -0.55
C11orf88-202ENST00000375618 MORN3Q6PF18 240 aaPredicted RBP11.63□□□□□ -0.55
C11orf88-202ENST00000375618 OR1L4Q8NGR5 311 aa11.63□□□□□ -0.55
C11orf88-202ENST00000375618 A0A0J9YWU9 116 aa11.62□□□□□ -0.55
C11orf88-202ENST00000375618 FAM78BQ5VT40 261 aa11.62□□□□□ -0.55
C11orf88-202ENST00000375618 MIR17HGQ75NE6 70 aa11.62□□□□□ -0.55
C11orf88-202ENST00000375618 ZNF709Q8N972 641 aa11.62□□□□□ -0.55
C11orf88-202ENST00000375618 GATAD1Q8WUU5 269 aa11.62□□□□□ -0.55
C11orf88-202ENST00000375618 FAM167A-AS1Q96KT0 104 aa11.62□□□□□ -0.55
C11orf88-202ENST00000375618 AQP10Q96PS8 301 aa11.62□□□□□ -0.55
C11orf88-202ENST00000375618 PFDN5Q99471 154 aa11.62□□□□□ -0.55
C11orf88-202ENST00000375618 ZNF331Q9NQX6 463 aaPredicted RBP11.62□□□□□ -0.55
C11orf88-202ENST00000375618 A8MTW9 85 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms