RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 SRSF12Q8WXF0 261 aaKnown RBP16.82■□□□□ 0.28
UPF3A-202ENST00000375299 IGHV3-72A0A0B4J1Y9 119 aa16.81■□□□□ 0.28
UPF3A-202ENST00000375299 ZC2HC1AQ96GY0 325 aa16.81■□□□□ 0.28
UPF3A-202ENST00000375299 SLC25A39Q9BZJ4 359 aaPredicted RBP16.81■□□□□ 0.28
UPF3A-202ENST00000375299 CACNA1HO95180 2353 aa16.81■□□□□ 0.28
UPF3A-202ENST00000375299 PPIAL4EA0A075B759 164 aa16.81■□□□□ 0.28
UPF3A-202ENST00000375299 ZNF785A8K8V0 405 aa16.81■□□□□ 0.28
UPF3A-202ENST00000375299 PPIAL4DF5H284 164 aa16.81■□□□□ 0.28
UPF3A-202ENST00000375299 PPIAL4FP0DN26 164 aa16.81■□□□□ 0.28
UPF3A-202ENST00000375299 CSN1S1P47710 185 aa16.81■□□□□ 0.28
UPF3A-202ENST00000375299 FOXE3Q13461 319 aa16.81■□□□□ 0.28
UPF3A-202ENST00000375299 FA2HQ7L5A8 372 aa16.81■□□□□ 0.28
UPF3A-202ENST00000375299 SMIM15Q7Z3B0 74 aa16.81■□□□□ 0.28
UPF3A-202ENST00000375299 OR10AG1Q8NH19 301 aa16.81■□□□□ 0.28
UPF3A-202ENST00000375299 C17orf100A8MU93 164 aa16.8■□□□□ 0.28
UPF3A-202ENST00000375299 NDUFB3O43676 98 aa16.8■□□□□ 0.28
UPF3A-202ENST00000375299 NCR2O95944 276 aa16.8■□□□□ 0.28
UPF3A-202ENST00000375299 FAM27E3Q08E93 113 aa16.8■□□□□ 0.28
UPF3A-202ENST00000375299 GAGE12BA1L429 117 aa16.8■□□□□ 0.28
UPF3A-202ENST00000375299 A0A1B0GW15 77 aa16.79■□□□□ 0.28
UPF3A-202ENST00000375299 C7orf71A4D174 169 aa16.79■□□□□ 0.28
UPF3A-202ENST00000375299 SEC11AP67812 179 aa16.79■□□□□ 0.28
UPF3A-202ENST00000375299 C1orf185Q5T7R7 199 aa16.79■□□□□ 0.28
UPF3A-202ENST00000375299 LYPD2Q6UXB3 125 aa16.79■□□□□ 0.28
UPF3A-202ENST00000375299 PRSS3P2Q8NHM4 247 aa16.79■□□□□ 0.28
UPF3A-202ENST00000375299 F11RQ9Y624 299 aaKnown RBP16.79■□□□□ 0.28
UPF3A-202ENST00000375299 DMXL1Q9Y485 3027 aa16.79■□□□□ 0.28
UPF3A-202ENST00000375299 OTOGLQ3ZCN5 2332 aa16.79■□□□□ 0.28
UPF3A-202ENST00000375299 IGLC1P0CG04 106 aa16.79■□□□□ 0.28
UPF3A-202ENST00000375299 DLX6P56179 175 aa16.79■□□□□ 0.28
UPF3A-202ENST00000375299 TMEM97Q5BJF2 176 aa16.79■□□□□ 0.28
UPF3A-202ENST00000375299 TMEM75Q8N9X5 138 aa16.79■□□□□ 0.28
UPF3A-202ENST00000375299 SNAI2O43623 268 aa16.78■□□□□ 0.28
UPF3A-202ENST00000375299 CRYGBP07316 175 aa16.78■□□□□ 0.28
UPF3A-202ENST00000375299 CNTFRP26992 372 aa16.78■□□□□ 0.28
UPF3A-202ENST00000375299 TMEM178BH3BS89 294 aa16.78■□□□□ 0.28
UPF3A-202ENST00000375299 IGF2-ASQ6U949 168 aa16.78■□□□□ 0.28
UPF3A-202ENST00000375299 DPF1Q92782 380 aa16.78■□□□□ 0.28
UPF3A-202ENST00000375299 EP300Q09472 2414 aaPredicted RBP16.77■□□□□ 0.27
UPF3A-202ENST00000375299 FGF6P10767 208 aa16.77■□□□□ 0.27
UPF3A-202ENST00000375299 LOXP28300 417 aaPredicted RBP16.77■□□□□ 0.27
UPF3A-202ENST00000375299 TMEM190Q8WZ59 177 aa16.77■□□□□ 0.27
UPF3A-202ENST00000375299 CTSZQ9UBR2 303 aa16.77■□□□□ 0.27
UPF3A-202ENST00000375299 K7ERU9 68 aa16.76■□□□□ 0.27
UPF3A-202ENST00000375299 TNFRSF13BO14836 293 aaPredicted RBP16.76■□□□□ 0.27
UPF3A-202ENST00000375299 IGFL3Q6UXB1 125 aa16.76■□□□□ 0.27
UPF3A-202ENST00000375299 SIGLEC9Q9Y336 463 aa16.76■□□□□ 0.27
UPF3A-202ENST00000375299 IGHV1-8P0DP01 117 aa16.75■□□□□ 0.27
UPF3A-202ENST00000375299 ADIPOQQ15848 244 aa16.75■□□□□ 0.27
UPF3A-202ENST00000375299 TMEM155Q4W5P6 130 aa16.75■□□□□ 0.27
UPF3A-202ENST00000375299 Q6AWC8 147 aa16.75■□□□□ 0.27
UPF3A-202ENST00000375299 PSG8Q9UQ74 426 aa16.75■□□□□ 0.27
UPF3A-202ENST00000375299 TRBV19A0A075B6N1 114 aa16.75■□□□□ 0.27
UPF3A-202ENST00000375299 A0A096LNJ9 63 aa16.75■□□□□ 0.27
UPF3A-202ENST00000375299 TEX22C9J3V5 150 aa16.75■□□□□ 0.27
UPF3A-202ENST00000375299 ASCL2Q99929 193 aa16.75■□□□□ 0.27
UPF3A-202ENST00000375299 RASL11BQ9BPW5 248 aa16.75■□□□□ 0.27
UPF3A-202ENST00000375299 NGBQ9NPG2 151 aa16.75■□□□□ 0.27
UPF3A-202ENST00000375299 IFI27P40305 119 aaPredicted RBP16.74■□□□□ 0.27
UPF3A-202ENST00000375299 RBPJQ06330 500 aa16.74■□□□□ 0.27
UPF3A-202ENST00000375299 TMEM108Q6UXF1 575 aa16.74■□□□□ 0.27
UPF3A-202ENST00000375299 CCL17Q92583 94 aa16.74■□□□□ 0.27
UPF3A-202ENST00000375299 SCNM1Q9BWG6 230 aa16.74■□□□□ 0.27
UPF3A-202ENST00000375299 K7EQM0 130 aa16.74■□□□□ 0.27
UPF3A-202ENST00000375299 FAM106CPP0CH98 169 aa16.74■□□□□ 0.27
UPF3A-202ENST00000375299 FAM106AQ4KMX7 169 aa16.74■□□□□ 0.27
UPF3A-202ENST00000375299 ZNF493Q6ZR52 646 aa16.74■□□□□ 0.27
UPF3A-202ENST00000375299 OR8A1Q8NGG7 326 aa16.74■□□□□ 0.27
UPF3A-202ENST00000375299 GAGE10A6NGK3 116 aa16.73■□□□□ 0.27
UPF3A-202ENST00000375299 RBP4P02753 201 aa16.73■□□□□ 0.27
UPF3A-202ENST00000375299 Q6ZS92 163 aa16.73■□□□□ 0.27
UPF3A-202ENST00000375299 ASCL5Q7RTU5 278 aa16.73■□□□□ 0.27
UPF3A-202ENST00000375299 PIP4P2Q8N4L2 257 aa16.73■□□□□ 0.27
UPF3A-202ENST00000375299 OR1N2Q8NGR9 330 aa16.73■□□□□ 0.27
UPF3A-202ENST00000375299 C17orf77Q96MU5 243 aa16.73■□□□□ 0.27
UPF3A-202ENST00000375299 TPPP3Q9BW30 176 aa16.73■□□□□ 0.27
UPF3A-202ENST00000375299 TMEM133Q9H2Q1 129 aa16.73■□□□□ 0.27
UPF3A-202ENST00000375299 I3L2K1 104 aa16.73■□□□□ 0.27
UPF3A-202ENST00000375299 KLK10O43240 276 aa16.73■□□□□ 0.27
UPF3A-202ENST00000375299 APOBEC3AP31941 199 aaPredicted RBP16.73■□□□□ 0.27
UPF3A-202ENST00000375299 CRIP1P50238 77 aa16.73■□□□□ 0.27
UPF3A-202ENST00000375299 LOXL1Q08397 574 aaPredicted RBP16.73■□□□□ 0.27
UPF3A-202ENST00000375299 PSG3Q16557 428 aa16.73■□□□□ 0.27
UPF3A-202ENST00000375299 SIGLEC15Q6ZMC9 328 aa16.73■□□□□ 0.27
UPF3A-202ENST00000375299 UQCRFS1P47985 274 aa16.72■□□□□ 0.27
UPF3A-202ENST00000375299 LGALS9BQ3B8N2 356 aa16.72■□□□□ 0.27
UPF3A-202ENST00000375299 LGALS9CQ6DKI2 356 aa16.72■□□□□ 0.27
UPF3A-202ENST00000375299 PPP1R27Q86WC6 154 aa16.72■□□□□ 0.27
UPF3A-202ENST00000375299 RABAC1Q9UI14 185 aa16.72■□□□□ 0.27
UPF3A-202ENST00000375299 H3BRM9 83 aa16.72■□□□□ 0.27
UPF3A-202ENST00000375299 UFSP1Q6NVU6 142 aa16.72■□□□□ 0.27
UPF3A-202ENST00000375299 SHANK2-AS3Q9BTD1 123 aa16.72■□□□□ 0.27
UPF3A-202ENST00000375299 SIGLEC8Q9NYZ4 499 aa16.72■□□□□ 0.27
UPF3A-202ENST00000375299 H3BRN7 92 aa16.71■□□□□ 0.27
UPF3A-202ENST00000375299 NHLH1Q02575 133 aa16.71■□□□□ 0.27
UPF3A-202ENST00000375299 A6NDN8 102 aa16.71■□□□□ 0.26
UPF3A-202ENST00000375299 C9orf118A6NHY6 69 aa16.71■□□□□ 0.26
UPF3A-202ENST00000375299 D6R8Y8 96 aa16.71■□□□□ 0.26
UPF3A-202ENST00000375299 BOD1L2Q8IYS8 172 aa16.71■□□□□ 0.26
UPF3A-202ENST00000375299 LYPD1Q8N2G4 141 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms