RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 HIST2H2BDQ6DRA6 164 aa8.66□□□□□ -1.02
CXCL12-203ENST00000374429 TMEM144Q7Z5S9 345 aa8.66□□□□□ -1.02
CXCL12-203ENST00000374429 PRNTQ86SH4 94 aa8.66□□□□□ -1.02
CXCL12-203ENST00000374429 TCTEX1D1Q8N7M0 179 aa8.66□□□□□ -1.02
CXCL12-203ENST00000374429 OR5B3Q8NH48 314 aa8.66□□□□□ -1.02
CXCL12-203ENST00000374429 VSTM2AQ8TAG5 236 aa8.66□□□□□ -1.02
CXCL12-203ENST00000374429 C17orf77Q96MU5 243 aa8.66□□□□□ -1.02
CXCL12-203ENST00000374429 HSPB9Q9BQS6 159 aa8.66□□□□□ -1.02
CXCL12-203ENST00000374429 HELZ2Q9BYK8 2649 aaKnown RBP8.66□□□□□ -1.02
CXCL12-203ENST00000374429 GGTLC3B5MD39 225 aa8.66□□□□□ -1.02
CXCL12-203ENST00000374429 IL4P05112 153 aa8.66□□□□□ -1.02
CXCL12-203ENST00000374429 C8orf88P0DMB2 117 aa8.66□□□□□ -1.02
CXCL12-203ENST00000374429 CNN1P51911 297 aaKnown RBP8.66□□□□□ -1.02
CXCL12-203ENST00000374429 FOXA3P55318 350 aaPredicted RBP8.66□□□□□ -1.02
CXCL12-203ENST00000374429 TAS2R45P59539 299 aa8.66□□□□□ -1.02
CXCL12-203ENST00000374429 FAM168AQ92567 244 aa8.66□□□□□ -1.02
CXCL12-203ENST00000374429 RASL11BQ9BPW5 248 aa8.66□□□□□ -1.02
CXCL12-203ENST00000374429 AMMECR1Q9Y4X0 333 aaPredicted RBP8.66□□□□□ -1.02
CXCL12-203ENST00000374429 MEF2CQ06413 473 aaPredicted RBP8.66□□□□□ -1.02
CXCL12-203ENST00000374429 Q71RC1 249 aaPredicted RBP8.66□□□□□ -1.02
CXCL12-203ENST00000374429 OR1L4Q8NGR5 311 aa8.66□□□□□ -1.02
CXCL12-203ENST00000374429 CMTM2Q8TAZ6 248 aa8.66□□□□□ -1.02
CXCL12-203ENST00000374429 UQCR10Q9UDW1 63 aa8.66□□□□□ -1.02
CXCL12-203ENST00000374429 TRAV26-1A0A087WT03 109 aa8.65□□□□□ -1.02
CXCL12-203ENST00000374429 M0R3E3 92 aa8.65□□□□□ -1.02
CXCL12-203ENST00000374429 CORTO00230 105 aa8.65□□□□□ -1.02
CXCL12-203ENST00000374429 ISLRO14498 428 aa8.65□□□□□ -1.02
CXCL12-203ENST00000374429 ZFP36P26651 326 aaKnown RBP8.65□□□□□ -1.02
CXCL12-203ENST00000374429 PDPNQ86YL7 162 aa8.65□□□□□ -1.02
CXCL12-203ENST00000374429 ATOH7Q8N100 152 aa8.65□□□□□ -1.02
CXCL12-203ENST00000374429 Q8N7P7 452 aa8.65□□□□□ -1.02
CXCL12-203ENST00000374429 OR5AN1Q8NGI8 311 aa8.65□□□□□ -1.02
CXCL12-203ENST00000374429 OR1N2Q8NGR9 330 aa8.65□□□□□ -1.02
CXCL12-203ENST00000374429 TRAV1-1A0A0B4J248 108 aa8.65□□□□□ -1.02
CXCL12-203ENST00000374429 F2Z2F3 143 aa8.65□□□□□ -1.02
CXCL12-203ENST00000374429 PDE6DO43924 150 aa8.65□□□□□ -1.02
CXCL12-203ENST00000374429 CLEC3BP05452 202 aa8.65□□□□□ -1.02
CXCL12-203ENST00000374429 CEACAM3P40198 252 aa8.65□□□□□ -1.02
CXCL12-203ENST00000374429 FAM19A2Q8N3H0 131 aa8.65□□□□□ -1.02
CXCL12-203ENST00000374429 NDUFA4L2Q9NRX3 87 aa8.65□□□□□ -1.02
CXCL12-203ENST00000374429 SIGLEC9Q9Y336 463 aa8.65□□□□□ -1.02
CXCL12-203ENST00000374429 TIMM9Q9Y5J7 89 aa8.65□□□□□ -1.02
CXCL12-203ENST00000374429 K7EN84 100 aa8.64□□□□□ -1.03
CXCL12-203ENST00000374429 CRYBA4P53673 196 aa8.64□□□□□ -1.03
CXCL12-203ENST00000374429 MFAP2P55001 183 aa8.64□□□□□ -1.03
CXCL12-203ENST00000374429 FAM120AOSQ5T036 256 aa8.64□□□□□ -1.03
CXCL12-203ENST00000374429 GOLT1AQ6ZVE7 132 aa8.64□□□□□ -1.03
CXCL12-203ENST00000374429 TCF24Q7RTU0 167 aa8.64□□□□□ -1.03
CXCL12-203ENST00000374429 VMO1Q7Z5L0 202 aa8.64□□□□□ -1.03
CXCL12-203ENST00000374429 CTDSP1Q9GZU7 261 aa8.64□□□□□ -1.03
CXCL12-203ENST00000374429 DSCAML1Q8TD84 2053 aa8.64□□□□□ -1.03
CXCL12-203ENST00000374429 GAGE12BA1L429 117 aa8.64□□□□□ -1.03
CXCL12-203ENST00000374429 TMEM250H0YL14 139 aa8.64□□□□□ -1.03
CXCL12-203ENST00000374429 ZNF833PQ6ZTB9 187 aa8.64□□□□□ -1.03
CXCL12-203ENST00000374429 DEFB104AQ8WTQ1 72 aa8.64□□□□□ -1.03
CXCL12-203ENST00000374429 DPM3Q9P2X0 92 aa8.64□□□□□ -1.03
CXCL12-203ENST00000374429 B4DEV8 164 aa8.64□□□□□ -1.03
CXCL12-203ENST00000374429 MPDU1O75352 247 aa8.64□□□□□ -1.03
CXCL12-203ENST00000374429 MMD2Q8IY49 270 aa8.64□□□□□ -1.03
CXCL12-203ENST00000374429 DYNAPQ8N1N2 210 aa8.64□□□□□ -1.03
CXCL12-203ENST00000374429 GTSF1LQ9H1H1 148 aa8.64□□□□□ -1.03
CXCL12-203ENST00000374429 G3V318 75 aa8.63□□□□□ -1.03
CXCL12-203ENST00000374429 NUPR1O60356 82 aa8.63□□□□□ -1.03
CXCL12-203ENST00000374429 TPPP2P59282 170 aa8.63□□□□□ -1.03
CXCL12-203ENST00000374429 RPL15P61313 204 aaKnown RBP8.63□□□□□ -1.03
CXCL12-203ENST00000374429 IBA57Q5T440 356 aaKnown RBP8.63□□□□□ -1.03
CXCL12-203ENST00000374429 DAZAP1Q96EP5 407 aaKnown RBP8.63□□□□□ -1.03
CXCL12-203ENST00000374429 TRBV24-1A0A075B6N3 115 aa8.63□□□□□ -1.03
CXCL12-203ENST00000374429 HYPMO75409 117 aa8.63□□□□□ -1.03
CXCL12-203ENST00000374429 IGHV3-11P01762 117 aa8.63□□□□□ -1.03
CXCL12-203ENST00000374429 RAB9AP51151 201 aa8.63□□□□□ -1.03
CXCL12-203ENST00000374429 AMMECR1LQ6DCA0 310 aa8.63□□□□□ -1.03
CXCL12-203ENST00000374429 SMDT1Q9H4I9 107 aa8.63□□□□□ -1.03
CXCL12-203ENST00000374429 KCNIP2Q9NS61 270 aa8.63□□□□□ -1.03
CXCL12-203ENST00000374429 TOMM40O96008 361 aa8.63□□□□□ -1.03
CXCL12-203ENST00000374429 ADMP35318 185 aa8.62□□□□□ -1.03
CXCL12-203ENST00000374429 PATE2Q6UY27 113 aa8.62□□□□□ -1.03
CXCL12-203ENST00000374429 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.62□□□□□ -1.03
CXCL12-203ENST00000374429 UCNP55089 124 aa8.62□□□□□ -1.03
CXCL12-203ENST00000374429 PMCHL1Q16048 86 aa8.62□□□□□ -1.03
CXCL12-203ENST00000374429 SHISA2Q6UWI4 295 aa8.62□□□□□ -1.03
CXCL12-203ENST00000374429 OR52E5Q8NH55 327 aa8.62□□□□□ -1.03
CXCL12-203ENST00000374429 PGLYRP4Q96LB8 373 aa8.62□□□□□ -1.03
CXCL12-203ENST00000374429 MCRIP2Q9BUT9 160 aaKnown RBP8.62□□□□□ -1.03
CXCL12-203ENST00000374429 LSM4Q9Y4Z0 139 aaKnown RBP8.62□□□□□ -1.03
CXCL12-203ENST00000374429 LINC01548A6NM66 108 aa8.62□□□□□ -1.03
CXCL12-203ENST00000374429 PFN1P07737 140 aaKnown RBP8.62□□□□□ -1.03
CXCL12-203ENST00000374429 GPR183P32249 361 aa8.62□□□□□ -1.03
CXCL12-203ENST00000374429 CX3CL1P78423 397 aa8.62□□□□□ -1.03
CXCL12-203ENST00000374429 CIARTQ8N365 385 aaPredicted RBP8.62□□□□□ -1.03
CXCL12-203ENST00000374429 OR4B1Q8NGF8 309 aa8.62□□□□□ -1.03
CXCL12-203ENST00000374429 ZNF503Q96F45 646 aa8.62□□□□□ -1.03
CXCL12-203ENST00000374429 MRPL18Q9H0U6 180 aaKnown RBP8.62□□□□□ -1.03
CXCL12-203ENST00000374429 DIRC3C9JPN6 131 aa8.61□□□□□ -1.03
CXCL12-203ENST00000374429 ATP5J2P56134 94 aa8.61□□□□□ -1.03
CXCL12-203ENST00000374429 ZNF253O75346 499 aa8.61□□□□□ -1.03
CXCL12-203ENST00000374429 CRISP2P16562 243 aa8.61□□□□□ -1.03
CXCL12-203ENST00000374429 SRD5A1P18405 259 aa8.61□□□□□ -1.03
CXCL12-203ENST00000374429 CKS1BP61024 79 aa8.61□□□□□ -1.03
CXCL12-203ENST00000374429 RPEL1Q2QD12 228 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms