RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 TMEM200BQ69YZ2 307 aa8.67□□□□□ -1.02
PGK1-201ENST00000373316 KIR3DL3Q8N743 410 aa8.67□□□□□ -1.02
PGK1-201ENST00000373316 ST6GALNAC3Q8NDV1 305 aa8.67□□□□□ -1.02
PGK1-201ENST00000373316 VSIRQ9H7M9 311 aa8.67□□□□□ -1.02
PGK1-201ENST00000373316 JKAMPQ9P055 326 aa8.67□□□□□ -1.02
PGK1-201ENST00000373316 NDUFS8O00217 210 aa8.67□□□□□ -1.02
PGK1-201ENST00000373316 EGR1P18146 543 aa8.67□□□□□ -1.02
PGK1-201ENST00000373316 TNRC6AQ8NDV7 1962 aaKnown RBP8.67□□□□□ -1.02
PGK1-201ENST00000373316 SSC4DQ8WTU2 575 aa8.67□□□□□ -1.02
PGK1-201ENST00000373316 SPRY4Q9C004 299 aa8.67□□□□□ -1.02
PGK1-201ENST00000373316 NPFFR1Q9GZQ6 430 aa8.67□□□□□ -1.02
PGK1-201ENST00000373316 TNFRSF18Q9Y5U5 241 aa8.67□□□□□ -1.02
PGK1-201ENST00000373316 TMEM262E9PQX1 116 aa8.67□□□□□ -1.02
PGK1-201ENST00000373316 ORAOV1Q8WV07 137 aa8.67□□□□□ -1.02
PGK1-201ENST00000373316 CYSLTR1Q9Y271 337 aa8.67□□□□□ -1.02
PGK1-201ENST00000373316 FAM181BA6NEQ2 426 aa8.66□□□□□ -1.02
PGK1-201ENST00000373316 PFN1P07737 140 aaKnown RBP8.66□□□□□ -1.02
PGK1-201ENST00000373316 APELAP0DMC3 54 aa8.66□□□□□ -1.02
PGK1-201ENST00000373316 ADIPOQQ15848 244 aa8.66□□□□□ -1.02
PGK1-201ENST00000373316 JMJD8Q96S16 334 aa8.66□□□□□ -1.02
PGK1-201ENST00000373316 ICE1Q9Y2F5 2266 aa8.66□□□□□ -1.02
PGK1-201ENST00000373316 GATA3P23771 443 aa8.66□□□□□ -1.02
PGK1-201ENST00000373316 PLNP26678 52 aa8.66□□□□□ -1.02
PGK1-201ENST00000373316 ZNF56Q15929 161 aa8.66□□□□□ -1.02
PGK1-201ENST00000373316 PSG3Q16557 428 aa8.66□□□□□ -1.02
PGK1-201ENST00000373316 PRSS22Q9GZN4 317 aa8.66□□□□□ -1.02
PGK1-201ENST00000373316 RNASE7Q9H1E1 156 aaKnown RBP8.66□□□□□ -1.02
PGK1-201ENST00000373316 NCOA6Q14686 2063 aaPredicted RBP8.66□□□□□ -1.02
PGK1-201ENST00000373316 IGKV1D-17A0A075B6S4 117 aa8.66□□□□□ -1.02
PGK1-201ENST00000373316 C5orf63A6NC05 138 aa8.66□□□□□ -1.02
PGK1-201ENST00000373316 PIEZO1Q92508 2521 aa8.66□□□□□ -1.02
PGK1-201ENST00000373316 COL5A1P20908 1838 aaPredicted RBP8.66□□□□□ -1.02
PGK1-201ENST00000373316 ATXN7O15265 892 aaPredicted RBP8.66□□□□□ -1.02
PGK1-201ENST00000373316 RFNGQ9Y644 331 aa8.66□□□□□ -1.02
PGK1-201ENST00000373316 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.65□□□□□ -1.02
PGK1-201ENST00000373316 BUB1B-PAK6H3BSN5 160 aa8.65□□□□□ -1.02
PGK1-201ENST00000373316 CCL3L1P16619 93 aa8.65□□□□□ -1.02
PGK1-201ENST00000373316 VDAC2P45880 294 aaPredicted RBP8.65□□□□□ -1.02
PGK1-201ENST00000373316 SRSF2Q01130 221 aaKnown RBP8.65□□□□□ -1.02
PGK1-201ENST00000373316 A0A1B0GV72 72 aa8.65□□□□□ -1.02
PGK1-201ENST00000373316 IGKCP01834 107 aa8.65□□□□□ -1.02
PGK1-201ENST00000373316 ZNF329Q86UD4 541 aa8.65□□□□□ -1.02
PGK1-201ENST00000373316 SHANK2-AS3Q9BTD1 123 aa8.65□□□□□ -1.02
PGK1-201ENST00000373316 MAP1AP78559 2803 aaPredicted RBP8.65□□□□□ -1.02
PGK1-201ENST00000373316 MLNRO43193 412 aa8.65□□□□□ -1.03
PGK1-201ENST00000373316 C5orf64Q2M2E5 130 aa8.65□□□□□ -1.03
PGK1-201ENST00000373316 PIP4P1Q86T03 277 aa8.65□□□□□ -1.03
PGK1-201ENST00000373316 IFI27L1Q96BM0 104 aa8.65□□□□□ -1.03
PGK1-201ENST00000373316 FOXC2Q99958 501 aa8.65□□□□□ -1.03
PGK1-201ENST00000373316 SIGLEC9Q9Y336 463 aa8.65□□□□□ -1.03
PGK1-201ENST00000373316 THAP8Q8NA92 274 aa8.64□□□□□ -1.03
PGK1-201ENST00000373316 LINC01560Q8TB33 94 aa8.64□□□□□ -1.03
PGK1-201ENST00000373316 CEACAM8P31997 349 aaPredicted RBP8.64□□□□□ -1.03
PGK1-201ENST00000373316 LAGE3Q14657 143 aa8.64□□□□□ -1.03
PGK1-201ENST00000373316 LYPD6Q86Y78 171 aa8.64□□□□□ -1.03
PGK1-201ENST00000373316 KAAG1Q9UBP8 84 aa8.64□□□□□ -1.03
PGK1-201ENST00000373316 LINC00473A8K010 186 aa8.64□□□□□ -1.03
PGK1-201ENST00000373316 PAX9P55771 341 aa8.64□□□□□ -1.03
PGK1-201ENST00000373316 WFDC3Q8IUB2 231 aa8.64□□□□□ -1.03
PGK1-201ENST00000373316 NDUFA4L2Q9NRX3 87 aa8.64□□□□□ -1.03
PGK1-201ENST00000373316 PTPRQQ9UMZ3 2332 aa8.64□□□□□ -1.03
PGK1-201ENST00000373316 IGLV3-9A0A075B6K5 115 aa8.64□□□□□ -1.03
PGK1-201ENST00000373316 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.64□□□□□ -1.03
PGK1-201ENST00000373316 K7EM74 188 aa8.64□□□□□ -1.03
PGK1-201ENST00000373316 TIMM23O14925 209 aa8.64□□□□□ -1.03
PGK1-201ENST00000373316 IGHV2-5P01817 119 aa8.64□□□□□ -1.03
PGK1-201ENST00000373316 IFI27P40305 119 aaPredicted RBP8.64□□□□□ -1.03
PGK1-201ENST00000373316 PAX8Q06710 450 aa8.64□□□□□ -1.03
PGK1-201ENST00000373316 RNF166Q96A37 237 aaPredicted RBP8.64□□□□□ -1.03
PGK1-201ENST00000373316 KIAA1549Q9HCM3 1950 aa8.63□□□□□ -1.03
PGK1-201ENST00000373316 IGKV1-6A0A0C4DH72 117 aa8.63□□□□□ -1.03
PGK1-201ENST00000373316 LOC107984156A0A0G2JMH3 177 aa8.63□□□□□ -1.03
PGK1-201ENST00000373316 TMEM8BA6NDV4 472 aa8.63□□□□□ -1.03
PGK1-201ENST00000373316 PRTN3P24158 256 aa8.63□□□□□ -1.03
PGK1-201ENST00000373316 ZNF138P52744 262 aa8.63□□□□□ -1.03
PGK1-201ENST00000373316 FOXG1P55316 489 aaPredicted RBP8.63□□□□□ -1.03
PGK1-201ENST00000373316 FOXA3P55318 350 aaPredicted RBP8.63□□□□□ -1.03
PGK1-201ENST00000373316 HGFACQ04756 655 aa8.63□□□□□ -1.03
PGK1-201ENST00000373316 ZNF672Q499Z4 452 aaPredicted RBP8.63□□□□□ -1.03
PGK1-201ENST00000373316 SIGLEC15Q6ZMC9 328 aa8.63□□□□□ -1.03
PGK1-201ENST00000373316 RNF144BQ7Z419 303 aa8.63□□□□□ -1.03
PGK1-201ENST00000373316 ARL17AQ8IVW1 177 aa8.63□□□□□ -1.03
PGK1-201ENST00000373316 WIPF2Q8TF74 440 aaPredicted RBP8.63□□□□□ -1.03
PGK1-201ENST00000373316 MRAP2Q96G30 205 aa8.63□□□□□ -1.03
PGK1-201ENST00000373316 KLF2Q9Y5W3 355 aaPredicted RBP8.63□□□□□ -1.03
PGK1-201ENST00000373316 SPCS1Q9Y6A9 102 aa8.63□□□□□ -1.03
PGK1-201ENST00000373316 ITPR1Q14643 2758 aa8.63□□□□□ -1.03
PGK1-201ENST00000373316 UQCRFS1P47985 274 aa8.63□□□□□ -1.03
PGK1-201ENST00000373316 PLEKHB2Q96CS7 222 aa8.63□□□□□ -1.03
PGK1-201ENST00000373316 TACC2O95359 2948 aa8.63□□□□□ -1.03
PGK1-201ENST00000373316 H3BVH4 76 aa8.63□□□□□ -1.03
PGK1-201ENST00000373316 TMEM50AO95807 157 aa8.63□□□□□ -1.03
PGK1-201ENST00000373316 OVOL2Q9BRP0 275 aa8.63□□□□□ -1.03
PGK1-201ENST00000373316 TMEM160Q9NX00 188 aa8.63□□□□□ -1.03
PGK1-201ENST00000373316 TRAV41A0A0B4J266 112 aa8.63□□□□□ -1.03
PGK1-201ENST00000373316 Q86TA4 180 aa8.63□□□□□ -1.03
PGK1-201ENST00000373316 K7EMI3 77 aa8.62□□□□□ -1.03
PGK1-201ENST00000373316 CLEC19AQ6UXS0 136 aa8.62□□□□□ -1.03
PGK1-201ENST00000373316 C1orf122Q6ZSJ8 110 aa8.62□□□□□ -1.03
PGK1-201ENST00000373316 LIME1Q9H400 295 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms