RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 IMMP2LQ96T52 175 aa12.48□□□□□ -0.41
C9orf78-201ENST00000372447 HSPB9Q9BQS6 159 aa12.48□□□□□ -0.41
C9orf78-201ENST00000372447 AP4M1O00189 453 aa12.48□□□□□ -0.41
C9orf78-201ENST00000372447 UBE2CO00762 179 aa12.48□□□□□ -0.41
C9orf78-201ENST00000372447 GGCTO75223 188 aaKnown RBP12.48□□□□□ -0.41
C9orf78-201ENST00000372447 AKR1D1P51857 326 aa12.48□□□□□ -0.41
C9orf78-201ENST00000372447 ZNF329Q86UD4 541 aa12.48□□□□□ -0.41
C9orf78-201ENST00000372447 LINC01006Q8NI28 216 aa12.48□□□□□ -0.41
C9orf78-201ENST00000372447 C16orf95Q9H693 158 aa12.48□□□□□ -0.41
C9orf78-201ENST00000372447 SRD5A3Q9H8P0 318 aa12.48□□□□□ -0.41
C9orf78-201ENST00000372447 A0A1W2PPQ1 181 aa12.47□□□□□ -0.41
C9orf78-201ENST00000372447 IGHG2P01859 326 aa12.47□□□□□ -0.41
C9orf78-201ENST00000372447 FABP9Q0Z7S8 132 aa12.47□□□□□ -0.41
C9orf78-201ENST00000372447 TMEM95Q3KNT9 176 aa12.47□□□□□ -0.41
C9orf78-201ENST00000372447 OR10G8Q8NGN5 311 aa12.47□□□□□ -0.41
C9orf78-201ENST00000372447 THYN1Q9P016 225 aa12.47□□□□□ -0.41
C9orf78-201ENST00000372447 TRAV30A0A087WSZ9 112 aa12.46□□□□□ -0.41
C9orf78-201ENST00000372447 PPP5D1E7EU14 171 aa12.46□□□□□ -0.41
C9orf78-201ENST00000372447 TOMM40O96008 361 aa12.46□□□□□ -0.41
C9orf78-201ENST00000372447 GP9P14770 177 aa12.46□□□□□ -0.41
C9orf78-201ENST00000372447 MFAP4P55083 255 aa12.46□□□□□ -0.41
C9orf78-201ENST00000372447 TMEM158Q8WZ71 300 aa12.46□□□□□ -0.41
C9orf78-201ENST00000372447 TCEAL7Q9BRU2 100 aa12.46□□□□□ -0.41
C9orf78-201ENST00000372447 SLC25A39Q9BZJ4 359 aaPredicted RBP12.46□□□□□ -0.41
C9orf78-201ENST00000372447 MRPL27Q9P0M9 148 aaKnown RBP12.46□□□□□ -0.41
C9orf78-201ENST00000372447 GNG7O60262 68 aa12.46□□□□□ -0.42
C9orf78-201ENST00000372447 HIST1H2BKO60814 126 aa12.46□□□□□ -0.42
C9orf78-201ENST00000372447 HIST1H2BJP06899 126 aa12.46□□□□□ -0.42
C9orf78-201ENST00000372447 SNRPCP09234 159 aaKnown RBP12.46□□□□□ -0.42
C9orf78-201ENST00000372447 NBEAP1P0C6P0 100 aa12.46□□□□□ -0.42
C9orf78-201ENST00000372447 HIST1H2BOP23527 126 aa12.46□□□□□ -0.42
C9orf78-201ENST00000372447 HIST1H2BBP33778 126 aa12.46□□□□□ -0.42
C9orf78-201ENST00000372447 MYCNOSP40205 109 aa12.46□□□□□ -0.42
C9orf78-201ENST00000372447 HIST1H2BDP58876 126 aa12.46□□□□□ -0.42
C9orf78-201ENST00000372447 HIST1H2BCP62807 126 aa12.46□□□□□ -0.42
C9orf78-201ENST00000372447 FOXL1Q12952 345 aa12.46□□□□□ -0.42
C9orf78-201ENST00000372447 HIST2H2BEQ16778 126 aa12.46□□□□□ -0.42
C9orf78-201ENST00000372447 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.46□□□□□ -0.42
C9orf78-201ENST00000372447 LEMD1Q68G75 181 aa12.46□□□□□ -0.42
C9orf78-201ENST00000372447 BLNKQ8WV28 456 aa12.46□□□□□ -0.42
C9orf78-201ENST00000372447 HIST1H2BHQ93079 126 aa12.46□□□□□ -0.42
C9orf78-201ENST00000372447 IGF2BP2-AS1Q96M15 143 aa12.46□□□□□ -0.42
C9orf78-201ENST00000372447 HIST1H2BNQ99877 126 aa12.46□□□□□ -0.42
C9orf78-201ENST00000372447 HIST1H2BMQ99879 126 aa12.46□□□□□ -0.42
C9orf78-201ENST00000372447 SERTAD4Q9NUC0 356 aa12.46□□□□□ -0.42
C9orf78-201ENST00000372447 S4R3C0 116 aa12.46□□□□□ -0.42
C9orf78-201ENST00000372447 TMEM89A2RUT3 159 aa12.45□□□□□ -0.42
C9orf78-201ENST00000372447 PHOX2AO14813 284 aa12.45□□□□□ -0.42
C9orf78-201ENST00000372447 FAM3BP58499 235 aaPredicted RBP12.45□□□□□ -0.42
C9orf78-201ENST00000372447 TAS2R60P59551 318 aa12.45□□□□□ -0.42
C9orf78-201ENST00000372447 RANP62826 216 aaKnown RBP12.45□□□□□ -0.42
C9orf78-201ENST00000372447 SGMS2Q8NHU3 365 aa12.45□□□□□ -0.42
C9orf78-201ENST00000372447 COL6A5A8TX70 2615 aa12.45□□□□□ -0.42
C9orf78-201ENST00000372447 PEX7O00628 323 aa12.44□□□□□ -0.42
C9orf78-201ENST00000372447 NDUFB8O95169 186 aa12.44□□□□□ -0.42
C9orf78-201ENST00000372447 TYMSP04818 313 aa12.44□□□□□ -0.42
C9orf78-201ENST00000372447 CNN1P51911 297 aaKnown RBP12.44□□□□□ -0.42
C9orf78-201ENST00000372447 YPEL3P61236 119 aaPredicted RBP12.44□□□□□ -0.42
C9orf78-201ENST00000372447 FRZBQ92765 325 aa12.44□□□□□ -0.42
C9orf78-201ENST00000372447 C21orf62Q9NYP8 219 aa12.44□□□□□ -0.42
C9orf78-201ENST00000372447 TMEM14CQ9P0S9 112 aa12.44□□□□□ -0.42
C9orf78-201ENST00000372447 LINC00527Q9UJ94 153 aa12.44□□□□□ -0.42
C9orf78-201ENST00000372447 CLPSL1A2RUU4 121 aa12.43□□□□□ -0.42
C9orf78-201ENST00000372447 F8W735 103 aaPredicted RBP12.43□□□□□ -0.42
C9orf78-201ENST00000372447 OR2J3O76001 311 aa12.43□□□□□ -0.42
C9orf78-201ENST00000372447 TRGC1P0CF51 173 aa12.43□□□□□ -0.42
C9orf78-201ENST00000372447 ERVFC1-1P60608 527 aa12.43□□□□□ -0.42
C9orf78-201ENST00000372447 OR5I1Q13606 314 aa12.43□□□□□ -0.42
C9orf78-201ENST00000372447 Q56UQ5 140 aa12.43□□□□□ -0.42
C9orf78-201ENST00000372447 ZNF600Q6ZNG1 722 aa12.43□□□□□ -0.42
C9orf78-201ENST00000372447 LINC00518Q8N0U6 118 aa12.43□□□□□ -0.42
C9orf78-201ENST00000372447 ZNF491Q8N8L2 437 aa12.43□□□□□ -0.42
C9orf78-201ENST00000372447 FAM110DQ8TAY7 271 aaPredicted RBP12.43□□□□□ -0.42
C9orf78-201ENST00000372447 RNF125Q96EQ8 232 aa12.43□□□□□ -0.42
C9orf78-201ENST00000372447 BTF3L4Q96K17 158 aa12.43□□□□□ -0.42
C9orf78-201ENST00000372447 NOL4LQ96MY1 436 aaPredicted RBP12.43□□□□□ -0.42
C9orf78-201ENST00000372447 WI2-2373I1.2A0A1W2PRP0 233 aa12.43□□□□□ -0.42
C9orf78-201ENST00000372447 PGPA6NDG6 321 aa12.43□□□□□ -0.42
C9orf78-201ENST00000372447 ATP6V0E1O15342 81 aa12.43□□□□□ -0.42
C9orf78-201ENST00000372447 GCGP01275 180 aa12.43□□□□□ -0.42
C9orf78-201ENST00000372447 IGLV2-8P01709 118 aa12.43□□□□□ -0.42
C9orf78-201ENST00000372447 IL4P05112 153 aa12.43□□□□□ -0.42
C9orf78-201ENST00000372447 HIST1H1BP16401 226 aaKnown RBP12.43□□□□□ -0.42
C9orf78-201ENST00000372447 NDUFA6P56556 154 aa12.43□□□□□ -0.42
C9orf78-201ENST00000372447 UNQ5815/PRO19632Q6UWF5 114 aa12.43□□□□□ -0.42
C9orf78-201ENST00000372447 LINC00479Q96M42 142 aa12.43□□□□□ -0.42
C9orf78-201ENST00000372447 SHANK2-AS3Q9BTD1 123 aa12.43□□□□□ -0.42
C9orf78-201ENST00000372447 EPDR1Q9UM22 224 aa12.43□□□□□ -0.42
C9orf78-201ENST00000372447 RNF114Q9Y508 228 aa12.43□□□□□ -0.42
C9orf78-201ENST00000372447 H3BRN7 92 aa12.42□□□□□ -0.42
C9orf78-201ENST00000372447 IGF1P05019 195 aa12.42□□□□□ -0.42
C9orf78-201ENST00000372447 SLC25A5P05141 298 aaKnown RBP12.42□□□□□ -0.42
C9orf78-201ENST00000372447 MDFIQ99750 246 aa12.42□□□□□ -0.42
C9orf78-201ENST00000372447 IL36BQ9NZH7 164 aa12.42□□□□□ -0.42
C9orf78-201ENST00000372447 FBXL7Q9UJT9 491 aa12.42□□□□□ -0.42
C9orf78-201ENST00000372447 A0A1B0GUS0 222 aa12.41□□□□□ -0.42
C9orf78-201ENST00000372447 SLC17A3O00476 420 aa12.41□□□□□ -0.42
C9orf78-201ENST00000372447 PROK1P58294 105 aa12.41□□□□□ -0.42
C9orf78-201ENST00000372447 ECSCRQ19T08 205 aa12.41□□□□□ -0.42
C9orf78-201ENST00000372447 TMEM68Q96MH6 324 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms