RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 HYPMO75409 117 aa11.74□□□□□ -0.53
LMO4-201ENST00000370542 ARL14EPLP0DKL9 152 aa11.74□□□□□ -0.53
LMO4-201ENST00000370542 G6PCP35575 357 aa11.74□□□□□ -0.53
LMO4-201ENST00000370542 AESQ08117 197 aa11.74□□□□□ -0.53
LMO4-201ENST00000370542 TIGITQ495A1 244 aa11.74□□□□□ -0.53
LMO4-201ENST00000370542 SMIM15Q7Z3B0 74 aa11.74□□□□□ -0.53
LMO4-201ENST00000370542 Q8N976 141 aa11.74□□□□□ -0.53
LMO4-201ENST00000370542 SLC24A4Q8NFF2 622 aa11.74□□□□□ -0.53
LMO4-201ENST00000370542 COMMD5Q9GZQ3 224 aa11.74□□□□□ -0.53
LMO4-201ENST00000370542 NPVFQ9HCQ7 196 aa11.74□□□□□ -0.53
LMO4-201ENST00000370542 NAT8BQ9UHF3 227 aa11.74□□□□□ -0.53
LMO4-201ENST00000370542 COX11Q9Y6N1 276 aa11.74□□□□□ -0.53
LMO4-201ENST00000370542 DNAH9Q9NYC9 4486 aa11.74□□□□□ -0.53
LMO4-201ENST00000370542 TRAV30A0A087WSZ9 112 aa11.73□□□□□ -0.53
LMO4-201ENST00000370542 OOSP1A8MZH6 123 aa11.73□□□□□ -0.53
LMO4-201ENST00000370542 RBMXL2O75526 392 aaKnown RBP11.73□□□□□ -0.53
LMO4-201ENST00000370542 VDAC2P45880 294 aaPredicted RBP11.73□□□□□ -0.53
LMO4-201ENST00000370542 THBS3P49746 956 aa11.73□□□□□ -0.53
LMO4-201ENST00000370542 GNG10P50151 68 aa11.73□□□□□ -0.53
LMO4-201ENST00000370542 C17orf58Q2M2W7 97 aa11.73□□□□□ -0.53
LMO4-201ENST00000370542 NSUN5P1Q3KNT7 163 aa11.73□□□□□ -0.53
LMO4-201ENST00000370542 TCTEX1D4Q5JR98 221 aa11.73□□□□□ -0.53
LMO4-201ENST00000370542 PRAMEF5Q5TYX0 476 aa11.73□□□□□ -0.53
LMO4-201ENST00000370542 LYG1Q8N1E2 194 aa11.73□□□□□ -0.53
LMO4-201ENST00000370542 GNB4Q9HAV0 340 aa11.73□□□□□ -0.53
LMO4-201ENST00000370542 V9GYV3 84 aa11.73□□□□□ -0.53
LMO4-201ENST00000370542 SCO2A0A1W2PP80 73 aa11.72□□□□□ -0.53
LMO4-201ENST00000370542 BUB1B-PAK6H3BSN5 160 aa11.72□□□□□ -0.53
LMO4-201ENST00000370542 LINC00869P0C866 280 aa11.72□□□□□ -0.53
LMO4-201ENST00000370542 GNG4P50150 75 aa11.72□□□□□ -0.53
LMO4-201ENST00000370542 ERVK-16P61578 105 aa11.72□□□□□ -0.53
LMO4-201ENST00000370542 TMEM95Q3KNT9 176 aa11.72□□□□□ -0.53
LMO4-201ENST00000370542 OXLD1Q5BKU9 147 aa11.72□□□□□ -0.53
LMO4-201ENST00000370542 ZNF114Q8NC26 417 aa11.72□□□□□ -0.53
LMO4-201ENST00000370542 GGTLC1Q9BX51 225 aa11.72□□□□□ -0.53
LMO4-201ENST00000370542 OR2D2Q9H210 308 aa11.72□□□□□ -0.53
LMO4-201ENST00000370542 TRAV9-2A0A087WT02 112 aa11.71□□□□□ -0.53
LMO4-201ENST00000370542 KBTBD11-OT1A0A1B0GTJ5 212 aa11.71□□□□□ -0.53
LMO4-201ENST00000370542 A0A1W2PS18 150 aa11.71□□□□□ -0.53
LMO4-201ENST00000370542 HELTA6NFD8 242 aa11.71□□□□□ -0.53
LMO4-201ENST00000370542 PPBPP02775 128 aa11.71□□□□□ -0.53
LMO4-201ENST00000370542 RBX1P62877 108 aa11.71□□□□□ -0.53
LMO4-201ENST00000370542 ZNF816Q0VGE8 651 aaPredicted RBP11.71□□□□□ -0.53
LMO4-201ENST00000370542 MMDQ15546 238 aa11.71□□□□□ -0.53
LMO4-201ENST00000370542 UTF1Q5T230 341 aa11.71□□□□□ -0.53
LMO4-201ENST00000370542 TMEM136Q6ZRR5 245 aa11.71□□□□□ -0.53
LMO4-201ENST00000370542 OR4A16Q8NH70 328 aa11.71□□□□□ -0.53
LMO4-201ENST00000370542 DERL1Q9BUN8 251 aa11.71□□□□□ -0.53
LMO4-201ENST00000370542 RAB9BQ9NP90 201 aa11.71□□□□□ -0.53
LMO4-201ENST00000370542 TRBV20OR9-2A0A075B6H5 130 aa11.7□□□□□ -0.54
LMO4-201ENST00000370542 IZUMO1RA6ND01 250 aa11.7□□□□□ -0.54
LMO4-201ENST00000370542 PRB2P02812 416 aaPredicted RBP11.7□□□□□ -0.54
LMO4-201ENST00000370542 TSPOP30536 169 aa11.7□□□□□ -0.54
LMO4-201ENST00000370542 CEACAM3P40198 252 aa11.7□□□□□ -0.54
LMO4-201ENST00000370542 REG1BP48304 166 aa11.7□□□□□ -0.54
LMO4-201ENST00000370542 TAS2R45P59539 299 aa11.7□□□□□ -0.54
LMO4-201ENST00000370542 KLF5Q13887 457 aaPredicted RBP11.7□□□□□ -0.54
LMO4-201ENST00000370542 SLC25A33Q9BSK2 321 aa11.7□□□□□ -0.54
LMO4-201ENST00000370542 ZNF331Q9NQX6 463 aaPredicted RBP11.7□□□□□ -0.54
LMO4-201ENST00000370542 SMIM27A0A1W2PRY6 76 aa11.69□□□□□ -0.54
LMO4-201ENST00000370542 J3QR06 171 aa11.69□□□□□ -0.54
LMO4-201ENST00000370542 NDUFB8O95169 186 aa11.69□□□□□ -0.54
LMO4-201ENST00000370542 APCSP02743 223 aa11.69□□□□□ -0.54
LMO4-201ENST00000370542 C3orf79P0CE67 100 aa11.69□□□□□ -0.54
LMO4-201ENST00000370542 CD24P25063 80 aa11.69□□□□□ -0.54
LMO4-201ENST00000370542 RPL30P62888 115 aaKnown RBP11.69□□□□□ -0.54
LMO4-201ENST00000370542 C21orf62-AS1Q17RA5 79 aa11.69□□□□□ -0.54
LMO4-201ENST00000370542 TDRG1Q3Y452 100 aa11.69□□□□□ -0.54
LMO4-201ENST00000370542 CCDC144NLQ6NUI1 221 aa11.69□□□□□ -0.54
LMO4-201ENST00000370542 TEPPQ6URK8 271 aa11.69□□□□□ -0.54
LMO4-201ENST00000370542 PQLC2Q6ZP29 291 aa11.69□□□□□ -0.54
LMO4-201ENST00000370542 OR8I2Q8N0Y5 310 aa11.69□□□□□ -0.54
LMO4-201ENST00000370542 STPG4Q8N801 248 aa11.69□□□□□ -0.54
LMO4-201ENST00000370542 ZNF439Q8NDP4 499 aa11.69□□□□□ -0.54
LMO4-201ENST00000370542 OR9G1Q8NH87 305 aa11.69□□□□□ -0.54
LMO4-201ENST00000370542 MGST2Q99735 147 aa11.69□□□□□ -0.54
LMO4-201ENST00000370542 ALKBH7Q9BT30 221 aaPredicted RBP11.69□□□□□ -0.54
LMO4-201ENST00000370542 HEYLQ9NQ87 328 aaPredicted RBP11.69□□□□□ -0.54
LMO4-201ENST00000370542 TECRQ9NZ01 308 aaKnown RBP11.69□□□□□ -0.54
LMO4-201ENST00000370542 LSM4Q9Y4Z0 139 aaKnown RBP11.69□□□□□ -0.54
LMO4-201ENST00000370542 SPINT2O43291 252 aa11.68□□□□□ -0.54
LMO4-201ENST00000370542 RAMP3O60896 148 aa11.68□□□□□ -0.54
LMO4-201ENST00000370542 NPY1RP25929 384 aa11.68□□□□□ -0.54
LMO4-201ENST00000370542 LOXL3P58215 753 aa11.68□□□□□ -0.54
LMO4-201ENST00000370542 FAM231DQ6ZW35 169 aa11.68□□□□□ -0.54
LMO4-201ENST00000370542 OR4C5Q8NGB2 326 aa11.68□□□□□ -0.54
LMO4-201ENST00000370542 FAM103A1Q9BTL3 118 aaKnown RBP11.68□□□□□ -0.54
LMO4-201ENST00000370542 TSSC4Q9Y5U2 329 aaPredicted RBP11.68□□□□□ -0.54
LMO4-201ENST00000370542 A0A1W2PRE2 83 aa11.67□□□□□ -0.54
LMO4-201ENST00000370542 C12orf77C9JDV5 145 aa11.67□□□□□ -0.54
LMO4-201ENST00000370542 PRSS46E5RG02 174 aa11.67□□□□□ -0.54
LMO4-201ENST00000370542 K7EN84 100 aa11.67□□□□□ -0.54
LMO4-201ENST00000370542 CCL25O15444 150 aa11.67□□□□□ -0.54
LMO4-201ENST00000370542 CA2P00918 260 aa11.67□□□□□ -0.54
LMO4-201ENST00000370542 HBZP02008 142 aa11.67□□□□□ -0.54
LMO4-201ENST00000370542 TFPI2P48307 235 aa11.67□□□□□ -0.54
LMO4-201ENST00000370542 OR13A1Q8NGR1 328 aa11.67□□□□□ -0.54
LMO4-201ENST00000370542 MRAPQ8TCY5 172 aa11.67□□□□□ -0.54
LMO4-201ENST00000370542 ST20Q9HBF5 79 aa11.67□□□□□ -0.54
LMO4-201ENST00000370542 ENY2Q9NPA8 101 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms