RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 GLMPQ8WWB7 406 aa12.82□□□□□ -0.36
FBXO28-201ENST00000366862 HAX1O00165 279 aa12.81□□□□□ -0.36
FBXO28-201ENST00000366862 IFITM1P13164 125 aa12.81□□□□□ -0.36
FBXO28-201ENST00000366862 UCNP55089 124 aa12.81□□□□□ -0.36
FBXO28-201ENST00000366862 SMKR1H3BMG3 65 aa12.81□□□□□ -0.36
FBXO28-201ENST00000366862 FAM104BQ5XKR9 115 aa12.81□□□□□ -0.36
FBXO28-201ENST00000366862 FDCSPQ8NFU4 85 aa12.81□□□□□ -0.36
FBXO28-201ENST00000366862 H0YJW9 148 aa12.81□□□□□ -0.36
FBXO28-201ENST00000366862 CRPP02741 224 aa12.81□□□□□ -0.36
FBXO28-201ENST00000366862 RPL15P61313 204 aaKnown RBP12.81□□□□□ -0.36
FBXO28-201ENST00000366862 C20orf204Q6ZNR8 217 aa12.81□□□□□ -0.36
FBXO28-201ENST00000366862 ABHD17AQ96GS6 310 aa12.81□□□□□ -0.36
FBXO28-201ENST00000366862 IGKV1-6A0A0C4DH72 117 aa12.81□□□□□ -0.36
FBXO28-201ENST00000366862 PRSS46E5RG02 174 aa12.81□□□□□ -0.36
FBXO28-201ENST00000366862 PDE6HQ13956 83 aa12.81□□□□□ -0.36
FBXO28-201ENST00000366862 C11orf52Q96A22 123 aa12.81□□□□□ -0.36
FBXO28-201ENST00000366862 POLR2AP24928 1970 aaKnown RBP12.81□□□□□ -0.36
FBXO28-201ENST00000366862 TRAV8-3A0A0A6YYJ7 113 aa12.8□□□□□ -0.36
FBXO28-201ENST00000366862 IGHV2-70DA0A0C4DH43 119 aa12.8□□□□□ -0.36
FBXO28-201ENST00000366862 CSRP2Q16527 193 aa12.8□□□□□ -0.36
FBXO28-201ENST00000366862 CENPVQ7Z7K6 275 aaPredicted RBP12.8□□□□□ -0.36
FBXO28-201ENST00000366862 TP53BP1Q12888 1972 aaPredicted RBP12.8□□□□□ -0.36
FBXO28-201ENST00000366862 TIMM23O14925 209 aa12.8□□□□□ -0.36
FBXO28-201ENST00000366862 CSTL1Q9H114 145 aa12.8□□□□□ -0.36
FBXO28-201ENST00000366862 RASL10AQ92737 203 aa12.79□□□□□ -0.36
FBXO28-201ENST00000366862 PYGO2Q9BRQ0 406 aa12.79□□□□□ -0.36
FBXO28-201ENST00000366862 CCL25O15444 150 aa12.79□□□□□ -0.36
FBXO28-201ENST00000366862 IGHV1-46P01743 117 aa12.79□□□□□ -0.36
FBXO28-201ENST00000366862 Q8N8P6 123 aa12.79□□□□□ -0.36
FBXO28-201ENST00000366862 LINC00477Q96M19 166 aa12.79□□□□□ -0.36
FBXO28-201ENST00000366862 SPANXCQ9NY87 97 aa12.79□□□□□ -0.36
FBXO28-201ENST00000366862 SIP14410 1827 aa12.79□□□□□ -0.36
FBXO28-201ENST00000366862 PAX8Q06710 450 aa12.78□□□□□ -0.36
FBXO28-201ENST00000366862 CEND1Q8N111 149 aa12.78□□□□□ -0.36
FBXO28-201ENST00000366862 MYMXA0A1B0GTQ4 84 aa12.78□□□□□ -0.36
FBXO28-201ENST00000366862 C9orf139Q6ZV77 190 aa12.78□□□□□ -0.36
FBXO28-201ENST00000366862 DEFB125Q8N687 156 aa12.78□□□□□ -0.36
FBXO28-201ENST00000366862 ZNF114Q8NC26 417 aa12.78□□□□□ -0.36
FBXO28-201ENST00000366862 OR11H6Q8NGC7 330 aa12.78□□□□□ -0.36
FBXO28-201ENST00000366862 ITLN2Q8WWU7 325 aaPredicted RBP12.78□□□□□ -0.36
FBXO28-201ENST00000366862 FOXG1P55316 489 aaPredicted RBP12.77□□□□□ -0.36
FBXO28-201ENST00000366862 SPACA3Q8IXA5 215 aa12.77□□□□□ -0.36
FBXO28-201ENST00000366862 SHANK2-AS3Q9BTD1 123 aa12.77□□□□□ -0.36
FBXO28-201ENST00000366862 METRNQ9UJH8 293 aa12.77□□□□□ -0.36
FBXO28-201ENST00000366862 ZNF688P0C7X2 276 aa12.77□□□□□ -0.37
FBXO28-201ENST00000366862 LINC00158P58513 81 aa12.77□□□□□ -0.37
FBXO28-201ENST00000366862 NPC2P61916 151 aa12.77□□□□□ -0.37
FBXO28-201ENST00000366862 PHLDA1Q8WV24 401 aaPredicted RBP12.77□□□□□ -0.37
FBXO28-201ENST00000366862 A0A0U1RRA0 63 aa12.77□□□□□ -0.37
FBXO28-201ENST00000366862 ZCCHC24Q8N2G6 241 aaKnown RBP12.77□□□□□ -0.37
FBXO28-201ENST00000366862 TIMM21Q9BVV7 248 aa12.77□□□□□ -0.37
FBXO28-201ENST00000366862 DNAJC13O75165 2243 aa12.77□□□□□ -0.37
FBXO28-201ENST00000366862 CFHR2P36980 270 aa12.77□□□□□ -0.37
FBXO28-201ENST00000366862 ZNF876PQ49A33 203 aa12.77□□□□□ -0.37
FBXO28-201ENST00000366862 Q8TAT8 98 aa12.77□□□□□ -0.37
FBXO28-201ENST00000366862 DNAJC30Q96LL9 226 aa12.77□□□□□ -0.37
FBXO28-201ENST00000366862 TDRD6O60522 2096 aaKnown RBP12.77□□□□□ -0.37
FBXO28-201ENST00000366862 INAFM2P0DMQ5 153 aa12.76□□□□□ -0.37
FBXO28-201ENST00000366862 KLF5Q13887 457 aaPredicted RBP12.76□□□□□ -0.37
FBXO28-201ENST00000366862 PINLYPA6NC86 204 aa12.76□□□□□ -0.37
FBXO28-201ENST00000366862 SRSF8Q9BRL6 282 aaKnown RBP12.76□□□□□ -0.37
FBXO28-201ENST00000366862 IGHV1-3A0A0C4DH29 117 aa12.76□□□□□ -0.37
FBXO28-201ENST00000366862 ADARB2-AS1A8MUL3 147 aa12.76□□□□□ -0.37
FBXO28-201ENST00000366862 GAGE2AQ6NT46 116 aa12.76□□□□□ -0.37
FBXO28-201ENST00000366862 HAPLN4Q86UW8 402 aa12.76□□□□□ -0.37
FBXO28-201ENST00000366862 VGLL1Q99990 258 aa12.76□□□□□ -0.37
FBXO28-201ENST00000366862 IGHV3OR16-10A0A075B7F0 116 aa12.76□□□□□ -0.37
FBXO28-201ENST00000366862 IGHV1-8P0DP01 117 aa12.76□□□□□ -0.37
FBXO28-201ENST00000366862 TMEM200BQ69YZ2 307 aa12.76□□□□□ -0.37
FBXO28-201ENST00000366862 BOD1L2Q8IYS8 172 aa12.76□□□□□ -0.37
FBXO28-201ENST00000366862 GATD1Q8NB37 220 aa12.76□□□□□ -0.37
FBXO28-201ENST00000366862 TMEM14BQ9NUH8 114 aa12.76□□□□□ -0.37
FBXO28-201ENST00000366862 IGHV3-11P01762 117 aa12.75□□□□□ -0.37
FBXO28-201ENST00000366862 ZNF883P0CG24 379 aa12.75□□□□□ -0.37
FBXO28-201ENST00000366862 LINC01560Q8TB33 94 aa12.75□□□□□ -0.37
FBXO28-201ENST00000366862 WIPF2Q8TF74 440 aaPredicted RBP12.75□□□□□ -0.37
FBXO28-201ENST00000366862 RCHY1Q96PM5 261 aa12.75□□□□□ -0.37
FBXO28-201ENST00000366862 RP1L1Q8IWN7 2480 aaPredicted RBP12.75□□□□□ -0.37
FBXO28-201ENST00000366862 ANK1P16157 1881 aa12.75□□□□□ -0.37
FBXO28-201ENST00000366862 LCNL1Q6ZST4 164 aa12.75□□□□□ -0.37
FBXO28-201ENST00000366862 TRGV2A0A075B6R0 118 aa12.75□□□□□ -0.37
FBXO28-201ENST00000366862 E9PLN8 166 aa12.75□□□□□ -0.37
FBXO28-201ENST00000366862 PEMTQ9UBM1 199 aa12.75□□□□□ -0.37
FBXO28-201ENST00000366862 MPDZO75970 2070 aa12.75□□□□□ -0.37
FBXO28-201ENST00000366862 TMEM213A2RRL7 107 aa12.75□□□□□ -0.37
FBXO28-201ENST00000366862 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.75□□□□□ -0.37
FBXO28-201ENST00000366862 LEPROTO15243 131 aa12.75□□□□□ -0.37
FBXO28-201ENST00000366862 TMEM141Q96I45 108 aa12.75□□□□□ -0.37
FBXO28-201ENST00000366862 C1QTNF4Q9BXJ3 329 aa12.75□□□□□ -0.37
FBXO28-201ENST00000366862 IL18BPO95998 194 aa12.75□□□□□ -0.37
FBXO28-201ENST00000366862 MALP21145 153 aa12.75□□□□□ -0.37
FBXO28-201ENST00000366862 EPOPA6NHQ4 379 aa12.74□□□□□ -0.37
FBXO28-201ENST00000366862 IGKV1-39P01597 117 aa12.74□□□□□ -0.37
FBXO28-201ENST00000366862 IGKV1D-39P04432 117 aa12.74□□□□□ -0.37
FBXO28-201ENST00000366862 CEACAM8P31997 349 aaPredicted RBP12.74□□□□□ -0.37
FBXO28-201ENST00000366862 PRSS57Q6UWY2 283 aa12.74□□□□□ -0.37
FBXO28-201ENST00000366862 C14orf178Q8N769 122 aaPredicted RBP12.74□□□□□ -0.37
FBXO28-201ENST00000366862 LINC00205P59089 165 aa12.74□□□□□ -0.37
FBXO28-201ENST00000366862 CABIN1Q9Y6J0 2220 aa12.74□□□□□ -0.37
FBXO28-201ENST00000366862 GAGE12JA6NER3 117 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms