RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 ZNF876PQ49A33 203 aa7□□□□□ -1.29
NCKAP1-202ENST00000361354 IGLV1-36A0A0B4J1U3 117 aa7□□□□□ -1.29
NCKAP1-202ENST00000361354 TMEM158Q8WZ71 300 aa7□□□□□ -1.29
NCKAP1-202ENST00000361354 C12orf77C9JDV5 145 aa7□□□□□ -1.29
NCKAP1-202ENST00000361354 F6UB75 175 aa7□□□□□ -1.29
NCKAP1-202ENST00000361354 LCNL1Q6ZST4 164 aa7□□□□□ -1.29
NCKAP1-202ENST00000361354 SRRM4A7MD48 611 aaKnown RBP7□□□□□ -1.29
NCKAP1-202ENST00000361354 C17orf98A8MV24 154 aa7□□□□□ -1.29
NCKAP1-202ENST00000361354 IGHV3OR16-10A0A075B7F0 116 aa7□□□□□ -1.29
NCKAP1-202ENST00000361354 A0A1B0GW64 132 aa7□□□□□ -1.29
NCKAP1-202ENST00000361354 FAM231BA6NCW3 169 aa7□□□□□ -1.29
NCKAP1-202ENST00000361354 K7EP13 123 aa7□□□□□ -1.29
NCKAP1-202ENST00000361354 GATA2P23769 480 aaPredicted RBP7□□□□□ -1.29
NCKAP1-202ENST00000361354 APOBEC3AP31941 199 aaPredicted RBP7□□□□□ -1.29
NCKAP1-202ENST00000361354 CARD19Q96LW7 228 aa7□□□□□ -1.29
NCKAP1-202ENST00000361354 ATOX1O00244 68 aa7□□□□□ -1.29
NCKAP1-202ENST00000361354 C8orf31Q8N9H6 132 aa7□□□□□ -1.29
NCKAP1-202ENST00000361354 IGHV1-45A0A0A0MS14 117 aa7□□□□□ -1.29
NCKAP1-202ENST00000361354 IGHV3-11P01762 117 aa7□□□□□ -1.29
NCKAP1-202ENST00000361354 PRCDQ00LT1 54 aa7□□□□□ -1.29
NCKAP1-202ENST00000361354 OR11H6Q8NGC7 330 aa6.99□□□□□ -1.29
NCKAP1-202ENST00000361354 FAM219BQ5XKK7 198 aa6.99□□□□□ -1.29
NCKAP1-202ENST00000361354 SPXQ9BT56 116 aa6.99□□□□□ -1.29
NCKAP1-202ENST00000361354 C18orf12Q96KH6 178 aa6.99□□□□□ -1.29
NCKAP1-202ENST00000361354 ZFYVE26Q68DK2 2539 aa6.99□□□□□ -1.29
NCKAP1-202ENST00000361354 NRXN3Q9Y4C0 1643 aa6.99□□□□□ -1.29
NCKAP1-202ENST00000361354 Q6ZT83 130 aa6.99□□□□□ -1.29
NCKAP1-202ENST00000361354 PYYP10082 97 aa6.99□□□□□ -1.29
NCKAP1-202ENST00000361354 NUP35Q8NFH5 326 aa6.99□□□□□ -1.29
NCKAP1-202ENST00000361354 AGMATQ9BSE5 352 aa6.99□□□□□ -1.29
NCKAP1-202ENST00000361354 FOXL2P58012 376 aa6.99□□□□□ -1.29
NCKAP1-202ENST00000361354 NLRC5Q86WI3 1866 aa6.99□□□□□ -1.29
NCKAP1-202ENST00000361354 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.99□□□□□ -1.29
NCKAP1-202ENST00000361354 RNF222A6NCQ9 220 aa6.99□□□□□ -1.29
NCKAP1-202ENST00000361354 LCN12Q6JVE5 192 aa6.99□□□□□ -1.29
NCKAP1-202ENST00000361354 IGHV1-24A0A0C4DH33 117 aa6.99□□□□□ -1.29
NCKAP1-202ENST00000361354 PPIFP30405 207 aaKnown RBP6.99□□□□□ -1.29
NCKAP1-202ENST00000361354 FAM166AQ6J272 317 aa6.99□□□□□ -1.29
NCKAP1-202ENST00000361354 DTX4Q9Y2E6 619 aa6.99□□□□□ -1.29
NCKAP1-202ENST00000361354 CRYBA4P53673 196 aa6.99□□□□□ -1.29
NCKAP1-202ENST00000361354 LINC01465Q8N7H1 131 aa6.99□□□□□ -1.29
NCKAP1-202ENST00000361354 NEU4Q8WWR8 484 aaPredicted RBP6.99□□□□□ -1.29
NCKAP1-202ENST00000361354 IFI6P09912 130 aa6.98□□□□□ -1.29
NCKAP1-202ENST00000361354 RTBDNQ9BSG5 229 aaPredicted RBP6.98□□□□□ -1.29
NCKAP1-202ENST00000361354 FGF6P10767 208 aa6.98□□□□□ -1.29
NCKAP1-202ENST00000361354 HLA-DMBP28068 263 aa6.98□□□□□ -1.29
NCKAP1-202ENST00000361354 FUSP35637 526 aaKnown RBP eCLIP6.98□□□□□ -1.29
NCKAP1-202ENST00000361354 TMEM141Q96I45 108 aa6.98□□□□□ -1.29
NCKAP1-202ENST00000361354 NUP210Q8TEM1 1887 aaPredicted RBP6.98□□□□□ -1.29
NCKAP1-202ENST00000361354 ZNF474Q6S9Z5 364 aaPredicted RBP6.98□□□□□ -1.29
NCKAP1-202ENST00000361354 MARF1Q9Y4F3 1742 aaKnown RBP6.98□□□□□ -1.29
NCKAP1-202ENST00000361354 CCL4P13236 92 aa6.98□□□□□ -1.29
NCKAP1-202ENST00000361354 ETDBQ3ZM63 59 aa6.98□□□□□ -1.29
NCKAP1-202ENST00000361354 SMIM20Q8N5G0 67 aa6.98□□□□□ -1.29
NCKAP1-202ENST00000361354 TRAV1-1A0A0B4J248 108 aa6.98□□□□□ -1.29
NCKAP1-202ENST00000361354 F8VVB4 439 aa6.98□□□□□ -1.29
NCKAP1-202ENST00000361354 F8VWA3 439 aa6.98□□□□□ -1.29
NCKAP1-202ENST00000361354 LYZL1Q6UWQ5 148 aa6.98□□□□□ -1.29
NCKAP1-202ENST00000361354 BRK1Q8WUW1 75 aa6.98□□□□□ -1.29
NCKAP1-202ENST00000361354 SCRT2Q9NQ03 307 aa6.98□□□□□ -1.29
NCKAP1-202ENST00000361354 LY96Q9Y6Y9 160 aa6.98□□□□□ -1.29
NCKAP1-202ENST00000361354 C3orf79P0CE67 100 aa6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 NRN1LQ496H8 165 aa6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 CXCL1P09341 107 aa6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 B5MCH6 92 aa6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 IGKV1D-16P01601 117 aa6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 STPG4Q8N801 248 aa6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 ACYP1P07311 99 aa6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 TRPT1Q86TN4 253 aaKnown RBP6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 LTBP4Q8N2S1 1624 aa6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 PEBP1P30086 187 aaKnown RBP6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 LINC01551Q86U37 167 aa6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 DEPPQ9NTK1 212 aa6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 IGKV2-40A0A087WW87 121 aaPredicted RBP6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 LHBP01229 141 aa6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 IGKV2D-40P01614 121 aaPredicted RBP6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 PRB4P10163 310 aaPredicted RBP6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 LIMS2Q7Z4I7 341 aa6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 PRSS22Q9GZN4 317 aa6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 PKIGQ9Y2B9 76 aa6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 RAMP3O60896 148 aa6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 CXCL10P02778 98 aa6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 CRYBA2P53672 197 aa6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 GFRA4Q9GZZ7 299 aa6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.97□□□□□ -1.29
NCKAP1-202ENST00000361354 A0A1W2PPM0 123 aa6.96□□□□□ -1.29
NCKAP1-202ENST00000361354 SRSF3P84103 164 aaKnown RBP6.96□□□□□ -1.29
NCKAP1-202ENST00000361354 VSIRQ9H7M9 311 aa6.96□□□□□ -1.29
NCKAP1-202ENST00000361354 ZNF138P52744 262 aa6.96□□□□□ -1.29
NCKAP1-202ENST00000361354 SRXN1Q9BYN0 137 aa6.96□□□□□ -1.29
NCKAP1-202ENST00000361354 WNT2P09544 360 aa6.96□□□□□ -1.29
NCKAP1-202ENST00000361354 C3orf36Q3SXR2 165 aa6.96□□□□□ -1.29
NCKAP1-202ENST00000361354 FHL5Q5TD97 284 aa6.96□□□□□ -1.29
NCKAP1-202ENST00000361354 SPSB3Q6PJ21 355 aa6.96□□□□□ -1.29
NCKAP1-202ENST00000361354 CENPVL1A0A0U1RR11 272 aa6.96□□□□□ -1.29
NCKAP1-202ENST00000361354 EREGO14944 169 aa6.96□□□□□ -1.29
NCKAP1-202ENST00000361354 YPEL1O60688 119 aa6.96□□□□□ -1.29
NCKAP1-202ENST00000361354 YPEL2Q96QA6 119 aa6.96□□□□□ -1.29
NCKAP1-202ENST00000361354 ZNF319Q9P2F9 582 aa6.96□□□□□ -1.29
NCKAP1-202ENST00000361354 CEND1Q8N111 149 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms