RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 PITX3O75364 302 aa14.78□□□□□ -0.04
CD47-202ENST00000361309 ORM2P19652 201 aa14.78□□□□□ -0.04
CD47-202ENST00000361309 GATA2P23769 480 aaPredicted RBP14.78□□□□□ -0.04
CD47-202ENST00000361309 CCL18P55774 89 aa14.78□□□□□ -0.04
CD47-202ENST00000361309 B2MP61769 119 aa14.78□□□□□ -0.04
CD47-202ENST00000361309 TMEM182Q6ZP80 229 aaPredicted RBP14.78□□□□□ -0.04
CD47-202ENST00000361309 RNF182Q8N6D2 247 aa14.78□□□□□ -0.04
CD47-202ENST00000361309 OR4D5Q8NGN0 318 aa14.78□□□□□ -0.04
CD47-202ENST00000361309 MCUBQ9NWR8 336 aa14.78□□□□□ -0.04
CD47-202ENST00000361309 LINC00588Q9Y4M8 146 aa14.78□□□□□ -0.04
CD47-202ENST00000361309 TRAV12-2A0A075B6T6 113 aa14.77□□□□□ -0.05
CD47-202ENST00000361309 ATP5G1P05496 136 aa14.77□□□□□ -0.05
CD47-202ENST00000361309 ATP5G3P48201 142 aa14.77□□□□□ -0.05
CD47-202ENST00000361309 GPR141Q7Z602 305 aa14.77□□□□□ -0.05
CD47-202ENST00000361309 SMIM18P0DKX4 95 aa14.76□□□□□ -0.05
CD47-202ENST00000361309 FGL1Q08830 312 aa14.76□□□□□ -0.05
CD47-202ENST00000361309 SPCS2Q15005 226 aa14.76□□□□□ -0.05
CD47-202ENST00000361309 BPIFCQ8NFQ6 507 aa14.76□□□□□ -0.05
CD47-202ENST00000361309 GPR82Q96P67 336 aa14.76□□□□□ -0.05
CD47-202ENST00000361309 TMEM147Q9BVK8 224 aa14.76□□□□□ -0.05
CD47-202ENST00000361309 SLC25A39Q9BZJ4 359 aaPredicted RBP14.76□□□□□ -0.05
CD47-202ENST00000361309 PRSS46E5RG02 174 aa14.75□□□□□ -0.05
CD47-202ENST00000361309 ZNF738Q8NE65 137 aa14.75□□□□□ -0.05
CD47-202ENST00000361309 RNF141Q8WVD5 230 aa14.75□□□□□ -0.05
CD47-202ENST00000361309 RABL2AQ9UBK7 228 aaPredicted RBP14.75□□□□□ -0.05
CD47-202ENST00000361309 RABL2BQ9UNT1 228 aa14.75□□□□□ -0.05
CD47-202ENST00000361309 DNAH5Q8TE73 4624 aa14.75□□□□□ -0.05
CD47-202ENST00000361309 DUXBA0A1W2PPF3 345 aa14.74□□□□□ -0.05
CD47-202ENST00000361309 CBY3A6NI87 242 aa14.74□□□□□ -0.05
CD47-202ENST00000361309 BOLA2-SMG1P6H3BVE0 249 aa14.74□□□□□ -0.05
CD47-202ENST00000361309 MED6O75586 246 aa14.74□□□□□ -0.05
CD47-202ENST00000361309 Q8N1X5 172 aa14.74□□□□□ -0.05
CD47-202ENST00000361309 LINC01587Q99440 93 aa14.74□□□□□ -0.05
CD47-202ENST00000361309 PIGBOS1A0A0B4J2F0 54 aa14.73□□□□□ -0.05
CD47-202ENST00000361309 HTN1P15515 57 aa14.73□□□□□ -0.05
CD47-202ENST00000361309 S100A7P31151 101 aa14.73□□□□□ -0.05
CD47-202ENST00000361309 RPP30P78346 268 aaKnown RBP14.73□□□□□ -0.05
CD47-202ENST00000361309 CLINT1Q14677 625 aa14.73□□□□□ -0.05
CD47-202ENST00000361309 SPATA12Q7Z6I5 190 aa14.73□□□□□ -0.05
CD47-202ENST00000361309 CIB3Q96Q77 187 aaPredicted RBP14.73□□□□□ -0.05
CD47-202ENST00000361309 WRBO00258 174 aa14.72□□□□□ -0.05
CD47-202ENST00000361309 SLC25A6P12236 298 aa14.72□□□□□ -0.05
CD47-202ENST00000361309 RHOBP62745 196 aa14.72□□□□□ -0.05
CD47-202ENST00000361309 AKR1C1Q04828 323 aa14.72□□□□□ -0.05
CD47-202ENST00000361309 SSX7Q7RTT5 188 aa14.72□□□□□ -0.05
CD47-202ENST00000361309 TMED4Q7Z7H5 227 aa14.72□□□□□ -0.05
CD47-202ENST00000361309 TMEM256Q8N2U0 113 aa14.72□□□□□ -0.05
CD47-202ENST00000361309 H3BRN7 92 aa14.71□□□□□ -0.05
CD47-202ENST00000361309 SYNGR2O43760 224 aa14.71□□□□□ -0.05
CD47-202ENST00000361309 TAS2R60P59551 318 aa14.71□□□□□ -0.05
CD47-202ENST00000361309 HIST1H1AQ02539 215 aaPredicted RBP14.71□□□□□ -0.05
CD47-202ENST00000361309 SPANXN5Q5MJ07 72 aa14.71□□□□□ -0.05
CD47-202ENST00000361309 C16orf74Q96GX8 76 aa14.71□□□□□ -0.05
CD47-202ENST00000361309 PPP1R14DQ9NXH3 145 aa14.71□□□□□ -0.05
CD47-202ENST00000361309 RSL24D1Q9UHA3 163 aaKnown RBP14.71□□□□□ -0.05
CD47-202ENST00000361309 TMEM128Q5BJH2 165 aa14.7□□□□□ -0.06
CD47-202ENST00000361309 ACOT7LQ6ZUV0 252 aa14.7□□□□□ -0.06
CD47-202ENST00000361309 LRTM2Q8N967 370 aa14.7□□□□□ -0.06
CD47-202ENST00000361309 OR8A1Q8NGG7 326 aa14.7□□□□□ -0.06
CD47-202ENST00000361309 Q9H8V8 135 aa14.7□□□□□ -0.06
CD47-202ENST00000361309 SCRT2Q9NQ03 307 aa14.7□□□□□ -0.06
CD47-202ENST00000361309 TIMM8BQ9Y5J9 83 aaPredicted RBP14.7□□□□□ -0.06
CD47-202ENST00000361309 H3BP45 60 aa14.69□□□□□ -0.06
CD47-202ENST00000361309 PRB4P10163 310 aaPredicted RBP14.69□□□□□ -0.06
CD47-202ENST00000361309 VAMP1P23763 118 aa14.69□□□□□ -0.06
CD47-202ENST00000361309 SHANK2-AS3Q9BTD1 123 aa14.69□□□□□ -0.06
CD47-202ENST00000361309 NOP10Q9NPE3 64 aaKnown RBP14.69□□□□□ -0.06
CD47-202ENST00000361309 RPL7P18124 248 aaKnown RBP14.68□□□□□ -0.06
CD47-202ENST00000361309 CXCL3P19876 107 aa14.68□□□□□ -0.06
CD47-202ENST00000361309 RAP2BP61225 183 aa14.68□□□□□ -0.06
CD47-202ENST00000361309 CYP2G1PQ6ZSU1 146 aa14.68□□□□□ -0.06
CD47-202ENST00000361309 TMEM144Q7Z5S9 345 aa14.68□□□□□ -0.06
CD47-202ENST00000361309 DYNC2LI1Q8TCX1 351 aa14.68□□□□□ -0.06
CD47-202ENST00000361309 KRTAP1-5Q9BYS1 174 aa14.68□□□□□ -0.06
CD47-202ENST00000361309 CCDC59Q9P031 241 aaKnown RBP14.68□□□□□ -0.06
CD47-202ENST00000361309 HIGD1AQ9Y241 93 aa14.68□□□□□ -0.06
CD47-202ENST00000361309 SMCO3A2RU48 225 aa14.67□□□□□ -0.06
CD47-202ENST00000361309 IL5P05113 134 aa14.67□□□□□ -0.06
CD47-202ENST00000361309 PSG3Q16557 428 aa14.67□□□□□ -0.06
CD47-202ENST00000361309 UHRF2Q96PU4 802 aa14.67□□□□□ -0.06
CD47-202ENST00000361309 STRAPQ9Y3F4 350 aaKnown RBP14.67□□□□□ -0.06
CD47-202ENST00000361309 HYPMO75409 117 aa14.66□□□□□ -0.06
CD47-202ENST00000361309 HOXB5P09067 269 aa14.66□□□□□ -0.06
CD47-202ENST00000361309 OR5I1Q13606 314 aa14.66□□□□□ -0.06
CD47-202ENST00000361309 ZNF493Q6ZR52 646 aa14.66□□□□□ -0.06
CD47-202ENST00000361309 LRRC20Q8TCA0 184 aa14.66□□□□□ -0.06
CD47-202ENST00000361309 RNASE8Q8TDE3 154 aaKnown RBP14.66□□□□□ -0.06
CD47-202ENST00000361309 GNPNAT1Q96EK6 184 aaPredicted RBP14.66□□□□□ -0.06
CD47-202ENST00000361309 SOSTQ9BQB4 213 aa14.66□□□□□ -0.06
CD47-202ENST00000361309 TRAV26-1A0A087WT03 109 aa14.65□□□□□ -0.06
CD47-202ENST00000361309 A0A087X0K7 114 aa14.65□□□□□ -0.06
CD47-202ENST00000361309 FABP12A6NFH5 140 aa14.65□□□□□ -0.06
CD47-202ENST00000361309 OR5G3P0C626 314 aa14.65□□□□□ -0.06
CD47-202ENST00000361309 FAUP35544 74 aaKnown RBP14.65□□□□□ -0.06
CD47-202ENST00000361309 CDKN1BP46527 198 aa14.65□□□□□ -0.06
CD47-202ENST00000361309 KRTAP10-2P60368 255 aa14.65□□□□□ -0.06
CD47-202ENST00000361309 TTC32Q5I0X7 151 aa14.65□□□□□ -0.06
CD47-202ENST00000361309 OR10J6PQ8NGY7 276 aa14.65□□□□□ -0.06
CD47-202ENST00000361309 TMEM263Q8WUH6 116 aaKnown RBP14.65□□□□□ -0.06
CD47-202ENST00000361309 SFT2D2O95562 160 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms