RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 HMGB3O15347 200 aaKnown RBP12.87□□□□□ -0.35
LMNA-202ENST00000361308 SAP30O75446 220 aa12.87□□□□□ -0.35
LMNA-202ENST00000361308 EIF3GO75821 320 aaKnown RBP eCLIP12.87□□□□□ -0.35
LMNA-202ENST00000361308 C16orf54Q6UWD8 224 aa12.87□□□□□ -0.35
LMNA-202ENST00000361308 WFDC9Q8NEX5 89 aa12.87□□□□□ -0.35
LMNA-202ENST00000361308 SPATA3Q8NHX4 192 aa12.87□□□□□ -0.35
LMNA-202ENST00000361308 CTXND1A0A1B0GTU2 59 aa12.86□□□□□ -0.35
LMNA-202ENST00000361308 ZNF705EA8MWA4 302 aaPredicted RBP12.86□□□□□ -0.35
LMNA-202ENST00000361308 RPL7P18124 248 aaKnown RBP12.86□□□□□ -0.35
LMNA-202ENST00000361308 ZNF726P1Q15940 193 aa12.86□□□□□ -0.35
LMNA-202ENST00000361308 BPIFA4PQ86YQ2 179 aa12.86□□□□□ -0.35
LMNA-202ENST00000361308 STXBP6Q8NFX7 210 aa12.86□□□□□ -0.35
LMNA-202ENST00000361308 DYNLRB2Q8TF09 96 aa12.86□□□□□ -0.35
LMNA-202ENST00000361308 SLC25A2Q9BXI2 301 aa12.86□□□□□ -0.35
LMNA-202ENST00000361308 MLXQ9UH92 298 aa12.86□□□□□ -0.35
LMNA-202ENST00000361308 UBQLN2Q9UHD9 624 aa12.86□□□□□ -0.35
LMNA-202ENST00000361308 H2AFB1P0C5Y9 115 aa12.85□□□□□ -0.35
LMNA-202ENST00000361308 RPL11P62913 178 aaKnown RBP12.85□□□□□ -0.35
LMNA-202ENST00000361308 KHDC3LQ587J8 217 aa12.85□□□□□ -0.35
LMNA-202ENST00000361308 SFT2D1Q8WV19 159 aa12.85□□□□□ -0.35
LMNA-202ENST00000361308 GPR82Q96P67 336 aa12.85□□□□□ -0.35
LMNA-202ENST00000361308 MCRIP2Q9BUT9 160 aaKnown RBP12.85□□□□□ -0.35
LMNA-202ENST00000361308 SELENOKQ9Y6D0 94 aa12.85□□□□□ -0.35
LMNA-202ENST00000361308 OR7C2O60412 319 aa12.85□□□□□ -0.35
LMNA-202ENST00000361308 CD5P06127 495 aa12.85□□□□□ -0.35
LMNA-202ENST00000361308 STAG3L2P0CL84 134 aa12.85□□□□□ -0.35
LMNA-202ENST00000361308 STAG3L3P0CL85 134 aa12.85□□□□□ -0.35
LMNA-202ENST00000361308 IFITM2Q01629 132 aa12.85□□□□□ -0.35
LMNA-202ENST00000361308 LCN15Q6UWW0 184 aa12.85□□□□□ -0.35
LMNA-202ENST00000361308 SIGLEC15Q6ZMC9 328 aa12.85□□□□□ -0.35
LMNA-202ENST00000361308 SSX7Q7RTT5 188 aa12.85□□□□□ -0.35
LMNA-202ENST00000361308 LRRC20Q8TCA0 184 aa12.85□□□□□ -0.35
LMNA-202ENST00000361308 GLMPQ8WWB7 406 aa12.85□□□□□ -0.35
LMNA-202ENST00000361308 FAM167A-AS1Q96KT0 104 aa12.85□□□□□ -0.35
LMNA-202ENST00000361308 OR51M1Q9H341 326 aa12.85□□□□□ -0.35
LMNA-202ENST00000361308 HELTA6NFD8 242 aa12.84□□□□□ -0.35
LMNA-202ENST00000361308 GALR1P47211 349 aa12.84□□□□□ -0.35
LMNA-202ENST00000361308 DEFB114Q30KQ6 69 aa12.84□□□□□ -0.35
LMNA-202ENST00000361308 PQLC2Q6ZP29 291 aa12.84□□□□□ -0.35
LMNA-202ENST00000361308 TCF24Q7RTU0 167 aa12.84□□□□□ -0.35
LMNA-202ENST00000361308 MAP1LC3B2A6NCE7 125 aa12.83□□□□□ -0.36
LMNA-202ENST00000361308 CXorf1O96002 111 aa12.83□□□□□ -0.36
LMNA-202ENST00000361308 BLOC1S1P78537 153 aa12.83□□□□□ -0.36
LMNA-202ENST00000361308 MBD3L1Q8WWY6 194 aa12.83□□□□□ -0.36
LMNA-202ENST00000361308 PAXXQ9BUH6 204 aa12.83□□□□□ -0.36
LMNA-202ENST00000361308 MAP1LC3BQ9GZQ8 125 aa12.83□□□□□ -0.36
LMNA-202ENST00000361308 TMEM14CQ9P0S9 112 aa12.83□□□□□ -0.36
LMNA-202ENST00000361308 ZNF785A8K8V0 405 aa12.82□□□□□ -0.36
LMNA-202ENST00000361308 ARL14EPLP0DKL9 152 aa12.82□□□□□ -0.36
LMNA-202ENST00000361308 PYYP10082 97 aa12.82□□□□□ -0.36
LMNA-202ENST00000361308 INSL3P51460 131 aa12.82□□□□□ -0.36
LMNA-202ENST00000361308 C9orf66Q5T8R8 295 aa12.82□□□□□ -0.36
LMNA-202ENST00000361308 RBPMS2Q6ZRY4 209 aaKnown RBP12.82□□□□□ -0.36
LMNA-202ENST00000361308 ZNF767PQ75MW2 155 aa12.82□□□□□ -0.36
LMNA-202ENST00000361308 SAT2Q96F10 170 aaPredicted RBP12.82□□□□□ -0.36
LMNA-202ENST00000361308 TEX46H3BTG2 121 aa12.82□□□□□ -0.36
LMNA-202ENST00000361308 OR10J4P0C629 311 aa12.82□□□□□ -0.36
LMNA-202ENST00000361308 ATF4P18848 351 aaPredicted RBP12.82□□□□□ -0.36
LMNA-202ENST00000361308 FGF8P55075 233 aaPredicted RBP12.82□□□□□ -0.36
LMNA-202ENST00000361308 CD300EQ496F6 205 aaPredicted RBP12.82□□□□□ -0.36
LMNA-202ENST00000361308 FAM90A2PQ658T7 463 aa12.82□□□□□ -0.36
LMNA-202ENST00000361308 SMAD5-AS1Q9Y6J3 95 aa12.82□□□□□ -0.36
LMNA-202ENST00000361308 IGKV3-7A0A075B6H7 116 aa12.81□□□□□ -0.36
LMNA-202ENST00000361308 MRPS12O15235 138 aaKnown RBP12.81□□□□□ -0.36
LMNA-202ENST00000361308 SNRPCP09234 159 aaKnown RBP12.81□□□□□ -0.36
LMNA-202ENST00000361308 GP9P14770 177 aa12.81□□□□□ -0.36
LMNA-202ENST00000361308 PRR31Q5SQ13 230 aa12.81□□□□□ -0.36
LMNA-202ENST00000361308 IQCF2Q8IXL9 164 aa12.81□□□□□ -0.36
LMNA-202ENST00000361308 ZNF503Q96F45 646 aa12.81□□□□□ -0.36
LMNA-202ENST00000361308 HRH4Q9H3N8 390 aa12.81□□□□□ -0.36
LMNA-202ENST00000361308 A0A1B0GV50 99 aa12.8□□□□□ -0.36
LMNA-202ENST00000361308 IGLV1-51P01701 117 aa12.8□□□□□ -0.36
LMNA-202ENST00000361308 HIST1H1EP10412 219 aaKnown RBP12.8□□□□□ -0.36
LMNA-202ENST00000361308 IGLL1P15814 213 aa12.8□□□□□ -0.36
LMNA-202ENST00000361308 UBE2L3P68036 154 aaKnown RBP12.8□□□□□ -0.36
LMNA-202ENST00000361308 TRRAPQ9Y4A5 3859 aa12.79□□□□□ -0.36
LMNA-202ENST00000361308 H3BQ15 152 aa12.79□□□□□ -0.36
LMNA-202ENST00000361308 HBE1P02100 147 aa12.79□□□□□ -0.36
LMNA-202ENST00000361308 NBEAP1P0C6P0 100 aa12.79□□□□□ -0.36
LMNA-202ENST00000361308 IGLC2P0DOY2 106 aa12.79□□□□□ -0.36
LMNA-202ENST00000361308 GCHFRP30047 84 aa12.79□□□□□ -0.36
LMNA-202ENST00000361308 RAB14P61106 215 aa12.79□□□□□ -0.36
LMNA-202ENST00000361308 PAFAH1B2P68402 229 aa12.79□□□□□ -0.36
LMNA-202ENST00000361308 TMEM61Q8N0U2 210 aa12.79□□□□□ -0.36
LMNA-202ENST00000361308 FXYD5Q96DB9 178 aa12.79□□□□□ -0.36
LMNA-202ENST00000361308 TRAV1-1A0A0B4J248 108 aa12.79□□□□□ -0.36
LMNA-202ENST00000361308 TRAV25A0A0B4J276 109 aa12.79□□□□□ -0.36
LMNA-202ENST00000361308 DNASE2O00115 360 aaPredicted RBP12.79□□□□□ -0.36
LMNA-202ENST00000361308 GBGT1Q8N5D6 347 aa12.79□□□□□ -0.36
LMNA-202ENST00000361308 BLNKQ8WV28 456 aa12.79□□□□□ -0.36
LMNA-202ENST00000361308 PCNPQ8WW12 178 aaKnown RBP12.79□□□□□ -0.36
LMNA-202ENST00000361308 TMPRSS5Q9H3S3 457 aa12.79□□□□□ -0.36
LMNA-202ENST00000361308 NRN1Q9NPD7 142 aa12.79□□□□□ -0.36
LMNA-202ENST00000361308 TMEM167BQ9NRX6 74 aa12.79□□□□□ -0.36
LMNA-202ENST00000361308 ZNF586Q9NXT0 402 aa12.79□□□□□ -0.36
LMNA-202ENST00000361308 TSPAN4O14817 238 aa12.78□□□□□ -0.36
LMNA-202ENST00000361308 MEOX2P50222 304 aa12.78□□□□□ -0.36
LMNA-202ENST00000361308 GUK1Q16774 197 aa12.78□□□□□ -0.36
LMNA-202ENST00000361308 OR2K2Q8NGT1 345 aa12.78□□□□□ -0.36
LMNA-202ENST00000361308 C17orf77Q96MU5 243 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms