RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 OCC1Q8TAD7 63 aa16.51■□□□□ 0.23
CDC42BPB-201ENST00000361246 DOPEY2Q9Y3R5 2298 aa16.51■□□□□ 0.23
CDC42BPB-201ENST00000361246 TRAV8-1A0A0A6YYK1 113 aa16.51■□□□□ 0.23
CDC42BPB-201ENST00000361246 K7EM74 188 aa16.51■□□□□ 0.23
CDC42BPB-201ENST00000361246 RPL36AP83881 106 aaKnown RBP16.51■□□□□ 0.23
CDC42BPB-201ENST00000361246 RPL36ALQ969Q0 106 aaKnown RBP16.51■□□□□ 0.23
CDC42BPB-201ENST00000361246 PRDM13Q9H4Q3 707 aa16.51■□□□□ 0.23
CDC42BPB-201ENST00000361246 MYLKQ15746 1914 aa16.51■□□□□ 0.23
CDC42BPB-201ENST00000361246 KIF26AQ9ULI4 1882 aaPredicted RBP16.51■□□□□ 0.23
CDC42BPB-201ENST00000361246 TTC9CQ8N5M4 171 aa16.51■□□□□ 0.23
CDC42BPB-201ENST00000361246 ARFGEF3Q5TH69 2177 aa16.51■□□□□ 0.23
CDC42BPB-201ENST00000361246 CLPSL2Q6UWE3 100 aa16.51■□□□□ 0.23
CDC42BPB-201ENST00000361246 IGLV2-23P01705 113 aa16.51■□□□□ 0.23
CDC42BPB-201ENST00000361246 GFI1Q99684 422 aa16.51■□□□□ 0.23
CDC42BPB-201ENST00000361246 RNF126Q9BV68 326 aa16.5■□□□□ 0.23
CDC42BPB-201ENST00000361246 NDUFS7O75251 213 aa16.5■□□□□ 0.23
CDC42BPB-201ENST00000361246 PAX9P55771 341 aa16.5■□□□□ 0.23
CDC42BPB-201ENST00000361246 SH2D1AO60880 128 aa16.5■□□□□ 0.23
CDC42BPB-201ENST00000361246 NHLRC3Q5JS37 347 aa16.5■□□□□ 0.23
CDC42BPB-201ENST00000361246 C17orf82Q86X59 251 aaPredicted RBP16.5■□□□□ 0.23
CDC42BPB-201ENST00000361246 CMC4P56277 68 aaPredicted RBP16.5■□□□□ 0.23
CDC42BPB-201ENST00000361246 IGHV1-69DA0A0B4J2H0 117 aa16.5■□□□□ 0.23
CDC42BPB-201ENST00000361246 IGHV1-69P01742 117 aa16.5■□□□□ 0.23
CDC42BPB-201ENST00000361246 PNRC2Q9NPJ4 139 aaKnown RBP16.5■□□□□ 0.23
CDC42BPB-201ENST00000361246 ZNF362Q5T0B9 420 aaPredicted RBP16.49■□□□□ 0.23
CDC42BPB-201ENST00000361246 TREML4Q6UXN2 200 aa16.49■□□□□ 0.23
CDC42BPB-201ENST00000361246 NAPSAO96009 420 aa16.49■□□□□ 0.23
CDC42BPB-201ENST00000361246 GAGE12BA1L429 117 aa16.49■□□□□ 0.23
CDC42BPB-201ENST00000361246 GAGE12JA6NER3 117 aa16.49■□□□□ 0.23
CDC42BPB-201ENST00000361246 FAM223BA6NKX1 122 aa16.49■□□□□ 0.23
CDC42BPB-201ENST00000361246 GAGE7O76087 117 aa16.49■□□□□ 0.23
CDC42BPB-201ENST00000361246 GAGE12FP0CL80 117 aa16.49■□□□□ 0.23
CDC42BPB-201ENST00000361246 GAGE12GP0CL81 117 aa16.49■□□□□ 0.23
CDC42BPB-201ENST00000361246 GAGE12IP0CL82 117 aa16.49■□□□□ 0.23
CDC42BPB-201ENST00000361246 GAGE1Q13065 139 aa16.49■□□□□ 0.23
CDC42BPB-201ENST00000361246 GAGE4Q13068 117 aa16.49■□□□□ 0.23
CDC42BPB-201ENST00000361246 GAGE5Q13069 117 aa16.49■□□□□ 0.23
CDC42BPB-201ENST00000361246 GAGE13Q4V321 117 aa16.49■□□□□ 0.23
CDC42BPB-201ENST00000361246 FAM223AQ8IWN6 122 aa16.49■□□□□ 0.23
CDC42BPB-201ENST00000361246 ADAMTS9Q9P2N4 1935 aa16.48■□□□□ 0.23
CDC42BPB-201ENST00000361246 LYZL1Q6UWQ5 148 aa16.48■□□□□ 0.23
CDC42BPB-201ENST00000361246 REG4Q9BYZ8 158 aa16.48■□□□□ 0.23
CDC42BPB-201ENST00000361246 A0A1B0GWJ7 208 aa16.48■□□□□ 0.23
CDC42BPB-201ENST00000361246 K7ERU9 68 aa16.48■□□□□ 0.23
CDC42BPB-201ENST00000361246 ABCA4P78363 2273 aa16.48■□□□□ 0.23
CDC42BPB-201ENST00000361246 ZNF98A6NK75 572 aa16.48■□□□□ 0.23
CDC42BPB-201ENST00000361246 ZMAT4Q9H898 229 aa16.48■□□□□ 0.23
CDC42BPB-201ENST00000361246 A0A1B0GWB2 263 aa16.47■□□□□ 0.23
CDC42BPB-201ENST00000361246 CCL20P78556 96 aa16.47■□□□□ 0.23
CDC42BPB-201ENST00000361246 ZNF625Q96I27 306 aaPredicted RBP16.47■□□□□ 0.23
CDC42BPB-201ENST00000361246 USMG5Q96IX5 58 aa16.47■□□□□ 0.23
CDC42BPB-201ENST00000361246 HS3ST6Q96QI5 342 aa16.47■□□□□ 0.23
CDC42BPB-201ENST00000361246 SERF1AO75920 110 aa16.47■□□□□ 0.23
CDC42BPB-201ENST00000361246 C6orf226Q5I0X4 101 aa16.47■□□□□ 0.23
CDC42BPB-201ENST00000361246 D6R8Y8 96 aa16.47■□□□□ 0.23
CDC42BPB-201ENST00000361246 IGHG3P01860 377 aa16.47■□□□□ 0.23
CDC42BPB-201ENST00000361246 IGHV3-38A0A0C4DH36 116 aa16.46■□□□□ 0.23
CDC42BPB-201ENST00000361246 TMEM86BQ8N661 226 aa16.46■□□□□ 0.23
CDC42BPB-201ENST00000361246 Q6P435 159 aa16.46■□□□□ 0.23
CDC42BPB-201ENST00000361246 GVINP1Q7Z2Y8 2422 aa16.46■□□□□ 0.23
CDC42BPB-201ENST00000361246 ZNF138P52744 262 aa16.46■□□□□ 0.23
CDC42BPB-201ENST00000361246 CSTL1Q9H114 145 aa16.46■□□□□ 0.23
CDC42BPB-201ENST00000361246 NHP2Q9NX24 153 aaKnown RBP16.46■□□□□ 0.23
CDC42BPB-201ENST00000361246 E9PQ18 207 aa16.46■□□□□ 0.23
CDC42BPB-201ENST00000361246 DEFB136Q30KP8 78 aa16.45■□□□□ 0.22
CDC42BPB-201ENST00000361246 Q6AWC8 147 aa16.45■□□□□ 0.22
CDC42BPB-201ENST00000361246 NIT1Q86X76 327 aa16.45■□□□□ 0.22
CDC42BPB-201ENST00000361246 GGTLC1Q9BX51 225 aa16.45■□□□□ 0.22
CDC42BPB-201ENST00000361246 ACACAQ13085 2346 aa16.45■□□□□ 0.22
CDC42BPB-201ENST00000361246 RNF222A6NCQ9 220 aa16.45■□□□□ 0.22
CDC42BPB-201ENST00000361246 GTF3C1Q12789 2109 aa16.45■□□□□ 0.22
CDC42BPB-201ENST00000361246 DERL1Q9BUN8 251 aa16.45■□□□□ 0.22
CDC42BPB-201ENST00000361246 DMRT1Q9Y5R6 373 aa16.45■□□□□ 0.22
CDC42BPB-201ENST00000361246 LY6G6EA0A0G2JKS1 128 aa16.44■□□□□ 0.22
CDC42BPB-201ENST00000361246 NDUFS8O00217 210 aa16.44■□□□□ 0.22
CDC42BPB-201ENST00000361246 DPM2O94777 84 aa16.44■□□□□ 0.22
CDC42BPB-201ENST00000361246 HOXD3P31249 432 aaPredicted RBP16.44■□□□□ 0.22
CDC42BPB-201ENST00000361246 U3KQA8 63 aa16.44■□□□□ 0.22
CDC42BPB-201ENST00000361246 TSC2P49815 1807 aa16.44■□□□□ 0.22
CDC42BPB-201ENST00000361246 LAGE3Q14657 143 aa16.44■□□□□ 0.22
CDC42BPB-201ENST00000361246 IGHV2-70DA0A0C4DH43 119 aa16.44■□□□□ 0.22
CDC42BPB-201ENST00000361246 DAZ1Q9NQZ3 744 aaKnown RBP16.44■□□□□ 0.22
CDC42BPB-201ENST00000361246 LHBP01229 141 aa16.43■□□□□ 0.22
CDC42BPB-201ENST00000361246 CEACAM8P31997 349 aaPredicted RBP16.43■□□□□ 0.22
CDC42BPB-201ENST00000361246 C1QTNF4Q9BXJ3 329 aa16.43■□□□□ 0.22
CDC42BPB-201ENST00000361246 IGKCP01834 107 aa16.43■□□□□ 0.22
CDC42BPB-201ENST00000361246 FNDC4Q9H6D8 234 aaPredicted RBP16.43■□□□□ 0.22
CDC42BPB-201ENST00000361246 USF3Q68DE3 2245 aa16.43■□□□□ 0.22
CDC42BPB-201ENST00000361246 ZNF407Q9C0G0 2248 aa16.43■□□□□ 0.22
CDC42BPB-201ENST00000361246 C8orf49Q96NF6 230 aa16.43■□□□□ 0.22
CDC42BPB-201ENST00000361246 TCTEX1D4Q5JR98 221 aa16.42■□□□□ 0.22
CDC42BPB-201ENST00000361246 LAMTOR3Q9UHA4 124 aa16.42■□□□□ 0.22
CDC42BPB-201ENST00000361246 KMT2EQ8IZD2 1858 aa16.42■□□□□ 0.22
CDC42BPB-201ENST00000361246 NTF4P34130 210 aa16.42■□□□□ 0.22
CDC42BPB-201ENST00000361246 RSPO3Q9BXY4 272 aaPredicted RBP16.42■□□□□ 0.22
CDC42BPB-201ENST00000361246 A0A0J9YY99 117 aa16.42■□□□□ 0.22
CDC42BPB-201ENST00000361246 SPAG8Q99932 426 aaPredicted RBP16.42■□□□□ 0.22
CDC42BPB-201ENST00000361246 F2Z2F3 143 aa16.41■□□□□ 0.22
CDC42BPB-201ENST00000361246 ANXA2RQ3ZCQ2 193 aa16.41■□□□□ 0.22
CDC42BPB-201ENST00000361246 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.41■□□□□ 0.222e-6■■■□□ 17.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms