RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 IFI27P40305 119 aaPredicted RBP11.49□□□□□ -0.57
APP-205ENST00000358918 SPRNQ5BIV9 151 aa11.49□□□□□ -0.57
APP-205ENST00000358918 TIMM23BQ5SRD1 257 aa11.49□□□□□ -0.57
APP-205ENST00000358918 FAM201AQ5SY85 155 aa11.49□□□□□ -0.57
APP-205ENST00000358918 SAMD5Q5TGI4 173 aa11.49□□□□□ -0.57
APP-205ENST00000358918 DUX4L9Q6RFH8 374 aaPredicted RBP11.49□□□□□ -0.57
APP-205ENST00000358918 PIP4P2Q8N4L2 257 aa11.49□□□□□ -0.57
APP-205ENST00000358918 C1orf162Q8NEQ5 155 aaPredicted RBP11.49□□□□□ -0.57
APP-205ENST00000358918 CEP250Q9BV73 2442 aa11.49□□□□□ -0.57
APP-205ENST00000358918 LHBP01229 141 aa11.48□□□□□ -0.57
APP-205ENST00000358918 C10orf55Q5SWW7 151 aa11.48□□□□□ -0.57
APP-205ENST00000358918 ZNF833PQ6ZTB9 187 aa11.48□□□□□ -0.57
APP-205ENST00000358918 ABHD17AQ96GS6 310 aa11.48□□□□□ -0.57
APP-205ENST00000358918 BOD1L1Q8NFC6 3051 aa11.48□□□□□ -0.57
APP-205ENST00000358918 GVINP1Q7Z2Y8 2422 aa11.48□□□□□ -0.57
APP-205ENST00000358918 A0A096LNJ9 63 aa11.48□□□□□ -0.57
APP-205ENST00000358918 PPIAL4CA0A0B4J2A2 164 aa11.48□□□□□ -0.57
APP-205ENST00000358918 IGHV1-18A0A0C4DH31 117 aa11.48□□□□□ -0.57
APP-205ENST00000358918 CGB1A6NKQ9 187 aa11.48□□□□□ -0.57
APP-205ENST00000358918 C22orf46C9J442 243 aa11.48□□□□□ -0.57
APP-205ENST00000358918 OVOL3O00110 214 aa11.48□□□□□ -0.57
APP-205ENST00000358918 GOSR1O95249 250 aa11.48□□□□□ -0.57
APP-205ENST00000358918 SMIM13P0DJ93 91 aa11.48□□□□□ -0.57
APP-205ENST00000358918 NMUP48645 174 aa11.48□□□□□ -0.57
APP-205ENST00000358918 MEF2CQ06413 473 aaPredicted RBP11.48□□□□□ -0.57
APP-205ENST00000358918 GOLT1AQ6ZVE7 132 aa11.48□□□□□ -0.57
APP-205ENST00000358918 SVIPQ8NHG7 77 aa11.48□□□□□ -0.57
APP-205ENST00000358918 TMEM167AQ8TBQ9 72 aa11.48□□□□□ -0.57
APP-205ENST00000358918 SIGMAR1Q99720 223 aa11.48□□□□□ -0.57
APP-205ENST00000358918 OTORQ9NRC9 128 aa11.48□□□□□ -0.57
APP-205ENST00000358918 INSIG2Q9Y5U4 225 aa11.48□□□□□ -0.57
APP-205ENST00000358918 IGLV1-44P01699 117 aa11.47□□□□□ -0.57
APP-205ENST00000358918 FAM106CPP0CH98 169 aa11.47□□□□□ -0.57
APP-205ENST00000358918 AZU1P20160 251 aa11.47□□□□□ -0.57
APP-205ENST00000358918 FAM106AQ4KMX7 169 aa11.47□□□□□ -0.57
APP-205ENST00000358918 OR10X1Q8NGY0 326 aa11.47□□□□□ -0.57
APP-205ENST00000358918 ZNF414Q96IQ9 312 aa11.47□□□□□ -0.57
APP-205ENST00000358918 TRGV9Q99603 122 aa11.47□□□□□ -0.57
APP-205ENST00000358918 DKK4Q9UBT3 224 aa11.47□□□□□ -0.57
APP-205ENST00000358918 AKAP13Q12802 2813 aa11.47□□□□□ -0.57
APP-205ENST00000358918 LOC389332A0A1B0GUA5 103 aa11.47□□□□□ -0.57
APP-205ENST00000358918 TEX48A0A1B0GUV7 120 aa11.47□□□□□ -0.57
APP-205ENST00000358918 K7EM74 188 aa11.47□□□□□ -0.57
APP-205ENST00000358918 LOXL1Q08397 574 aaPredicted RBP11.47□□□□□ -0.57
APP-205ENST00000358918 LINC00574Q9H8X3 128 aa11.47□□□□□ -0.57
APP-205ENST00000358918 PRR14LQ5THK1 2151 aa11.46□□□□□ -0.57
APP-205ENST00000358918 SPRY3O43610 288 aa11.46□□□□□ -0.57
APP-205ENST00000358918 TPPP3Q9BW30 176 aa11.46□□□□□ -0.57
APP-205ENST00000358918 GTSF1LQ9H1H1 148 aa11.46□□□□□ -0.57
APP-205ENST00000358918 SIGLEC8Q9NYZ4 499 aa11.46□□□□□ -0.57
APP-205ENST00000358918 F11RQ9Y624 299 aaKnown RBP11.46□□□□□ -0.57
APP-205ENST00000358918 PTPRZ1P23471 2315 aaPredicted RBP11.46□□□□□ -0.57
APP-205ENST00000358918 BMI1P35226 326 aa11.46□□□□□ -0.58
APP-205ENST00000358918 MSMPQ1L6U9 139 aa11.46□□□□□ -0.58
APP-205ENST00000358918 Q6AWC8 147 aa11.46□□□□□ -0.58
APP-205ENST00000358918 PRSS57Q6UWY2 283 aa11.46□□□□□ -0.58
APP-205ENST00000358918 ASCL5Q7RTU5 278 aa11.46□□□□□ -0.58
APP-205ENST00000358918 DEFB108BQ8NET1 73 aa11.46□□□□□ -0.58
APP-205ENST00000358918 C8orf46Q8TAG6 207 aa11.46□□□□□ -0.58
APP-205ENST00000358918 TMEM189A5PLL7 270 aa11.45□□□□□ -0.58
APP-205ENST00000358918 IGLV2-11P01706 119 aa11.45□□□□□ -0.58
APP-205ENST00000358918 IGFL3Q6UXB1 125 aa11.45□□□□□ -0.58
APP-205ENST00000358918 SEM1Q6ZVN7 128 aa11.45□□□□□ -0.58
APP-205ENST00000358918 PCP2Q8IVA1 136 aa11.45□□□□□ -0.58
APP-205ENST00000358918 GAFA1Q96PS6 74 aa11.45□□□□□ -0.58
APP-205ENST00000358918 TRBV6-1A0A0K0K1D8 114 aa11.45□□□□□ -0.58
APP-205ENST00000358918 SERTM2A0A1B0GWG4 89 aa11.45□□□□□ -0.58
APP-205ENST00000358918 D6R8Y8 96 aa11.45□□□□□ -0.58
APP-205ENST00000358918 HBDP02042 147 aa11.45□□□□□ -0.58
APP-205ENST00000358918 TM4SF20Q53R12 229 aa11.45□□□□□ -0.58
APP-205ENST00000358918 OR4C13Q8NGP0 309 aa11.45□□□□□ -0.58
APP-205ENST00000358918 CCL13Q99616 98 aa11.45□□□□□ -0.58
APP-205ENST00000358918 PLSCR4Q9NRQ2 329 aa11.45□□□□□ -0.58
APP-205ENST00000358918 PROCRQ9UNN8 238 aa11.45□□□□□ -0.58
APP-205ENST00000358918 MGAQ8IWI9 3026 aa11.44□□□□□ -0.58
APP-205ENST00000358918 INTS1Q8N201 2190 aaKnown RBP11.44□□□□□ -0.58
APP-205ENST00000358918 SPTBN2O15020 2390 aa11.44□□□□□ -0.58
APP-205ENST00000358918 A0A1B0GV72 72 aa11.44□□□□□ -0.58
APP-205ENST00000358918 GCSHP23434 173 aa11.44□□□□□ -0.58
APP-205ENST00000358918 SMAGPQ0VAQ4 97 aa11.44□□□□□ -0.58
APP-205ENST00000358918 PSG3Q16557 428 aa11.44□□□□□ -0.58
APP-205ENST00000358918 Q6ZS92 163 aa11.44□□□□□ -0.58
APP-205ENST00000358918 EXOC3-AS1Q8N2X6 119 aa11.44□□□□□ -0.58
APP-205ENST00000358918 IFI27L1Q96BM0 104 aa11.44□□□□□ -0.58
APP-205ENST00000358918 PRELID3AQ96N28 172 aa11.44□□□□□ -0.58
APP-205ENST00000358918 RNF7Q9UBF6 113 aa11.44□□□□□ -0.58
APP-205ENST00000358918 HIGD1AQ9Y241 93 aa11.44□□□□□ -0.58
APP-205ENST00000358918 CRYGCP07315 174 aa11.43□□□□□ -0.58
APP-205ENST00000358918 CT45A10P0DMU9 189 aa11.43□□□□□ -0.58
APP-205ENST00000358918 HOXB4P17483 251 aaPredicted RBP11.43□□□□□ -0.58
APP-205ENST00000358918 FCGR2BP31994 310 aaPredicted RBP11.43□□□□□ -0.58
APP-205ENST00000358918 ZNF493Q6ZR52 646 aa11.43□□□□□ -0.58
APP-205ENST00000358918 Q71RC1 249 aaPredicted RBP11.43□□□□□ -0.58
APP-205ENST00000358918 FAM216BQ8N7L0 139 aa11.43□□□□□ -0.58
APP-205ENST00000358918 A0A1W2PPI3 338 aa11.43□□□□□ -0.58
APP-205ENST00000358918 RUSC1-AS1Q66K80 236 aa11.43□□□□□ -0.58
APP-205ENST00000358918 SMPXQ9UHP9 88 aa11.43□□□□□ -0.58
APP-205ENST00000358918 DSPP15924 2871 aaKnown RBP11.43□□□□□ -0.58
APP-205ENST00000358918 CACNA1GO43497 2377 aa11.43□□□□□ -0.58
APP-205ENST00000358918 J3QR89 54 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms