RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 OR4F4Q96R69 305 aa13.94□□□□□ -0.18
SMARCD3-202ENST00000356800 TMEM14CQ9P0S9 112 aa13.94□□□□□ -0.18
SMARCD3-202ENST00000356800 YTHDF2Q9Y5A9 579 aaKnown RBP13.94□□□□□ -0.18
SMARCD3-202ENST00000356800 A0A1W2PRE2 83 aa13.93□□□□□ -0.18
SMARCD3-202ENST00000356800 PYYP10082 97 aa13.93□□□□□ -0.18
SMARCD3-202ENST00000356800 ATP5G3P48201 142 aa13.93□□□□□ -0.18
SMARCD3-202ENST00000356800 FAM209BQ5JX69 171 aa13.93□□□□□ -0.18
SMARCD3-202ENST00000356800 FAM90A2PQ658T7 463 aa13.93□□□□□ -0.18
SMARCD3-202ENST00000356800 GGCTO75223 188 aaKnown RBP13.92□□□□□ -0.18
SMARCD3-202ENST00000356800 GP9P14770 177 aa13.92□□□□□ -0.18
SMARCD3-202ENST00000356800 S100A7P31151 101 aa13.92□□□□□ -0.18
SMARCD3-202ENST00000356800 CDX1P47902 265 aaPredicted RBP13.92□□□□□ -0.18
SMARCD3-202ENST00000356800 PROK1P58294 105 aa13.92□□□□□ -0.18
SMARCD3-202ENST00000356800 UNQ9165/PRO28630Q6UXU0 137 aa13.92□□□□□ -0.18
SMARCD3-202ENST00000356800 RNF24Q9Y225 148 aa13.92□□□□□ -0.18
SMARCD3-202ENST00000356800 RNF114Q9Y508 228 aa13.92□□□□□ -0.18
SMARCD3-202ENST00000356800 F6UZH7 168 aa13.91□□□□□ -0.18
SMARCD3-202ENST00000356800 NDUFA4O00483 81 aa13.91□□□□□ -0.18
SMARCD3-202ENST00000356800 CD28P10747 220 aa13.91□□□□□ -0.18
SMARCD3-202ENST00000356800 RABAC1Q9UI14 185 aa13.91□□□□□ -0.18
SMARCD3-202ENST00000356800 ZNF98A6NK75 572 aa13.91□□□□□ -0.18
SMARCD3-202ENST00000356800 HAX1O00165 279 aa13.91□□□□□ -0.18
SMARCD3-202ENST00000356800 SNAPINO95295 136 aa13.91□□□□□ -0.18
SMARCD3-202ENST00000356800 CEBPGP53567 150 aa13.91□□□□□ -0.18
SMARCD3-202ENST00000356800 C11orf44Q8N8P7 122 aa13.91□□□□□ -0.18
SMARCD3-202ENST00000356800 NKX6-2Q9C056 277 aaPredicted RBP13.91□□□□□ -0.18
SMARCD3-202ENST00000356800 ZNF207O43670 478 aaKnown RBP13.9□□□□□ -0.18
SMARCD3-202ENST00000356800 C20orf24Q9BUV8 137 aa13.9□□□□□ -0.18
SMARCD3-202ENST00000356800 IGHV4OR15-8A0A075B7B6 117 aa13.89□□□□□ -0.19
SMARCD3-202ENST00000356800 A0A087WW49 117 aa13.89□□□□□ -0.19
SMARCD3-202ENST00000356800 NBEAP1P0C6P0 100 aa13.89□□□□□ -0.19
SMARCD3-202ENST00000356800 FAM74A3Q4VXF1 159 aa13.89□□□□□ -0.19
SMARCD3-202ENST00000356800 KHDC1LQ5JSQ8 128 aa13.89□□□□□ -0.19
SMARCD3-202ENST00000356800 BPIFA4PQ86YQ2 179 aa13.89□□□□□ -0.19
SMARCD3-202ENST00000356800 C4orf3Q8WVX3 66 aa13.89□□□□□ -0.19
SMARCD3-202ENST00000356800 TMEM190Q8WZ59 177 aa13.89□□□□□ -0.19
SMARCD3-202ENST00000356800 GGTLC3B5MD39 225 aa13.88□□□□□ -0.19
SMARCD3-202ENST00000356800 HIST1H1EP10412 219 aaKnown RBP13.88□□□□□ -0.19
SMARCD3-202ENST00000356800 NPPCP23582 126 aa13.88□□□□□ -0.19
SMARCD3-202ENST00000356800 DEFB136Q30KP8 78 aa13.88□□□□□ -0.19
SMARCD3-202ENST00000356800 ATRAIDQ6UW56 229 aa13.88□□□□□ -0.19
SMARCD3-202ENST00000356800 C11orf52Q96A22 123 aa13.88□□□□□ -0.19
SMARCD3-202ENST00000356800 NIPSNAP3BQ9BS92 247 aa13.88□□□□□ -0.19
SMARCD3-202ENST00000356800 JMJD1CQ15652 2540 aa13.88□□□□□ -0.19
SMARCD3-202ENST00000356800 MRPS12O15235 138 aaKnown RBP13.88□□□□□ -0.19
SMARCD3-202ENST00000356800 APOHP02749 345 aaPredicted RBP13.88□□□□□ -0.19
SMARCD3-202ENST00000356800 SNRPCP09234 159 aaKnown RBP13.88□□□□□ -0.19
SMARCD3-202ENST00000356800 CRYBB3P26998 211 aa13.88□□□□□ -0.19
SMARCD3-202ENST00000356800 GPHB5Q86YW7 130 aa13.88□□□□□ -0.19
SMARCD3-202ENST00000356800 CLRN3Q8NCR9 226 aa13.88□□□□□ -0.19
SMARCD3-202ENST00000356800 PARLQ9H300 379 aa13.88□□□□□ -0.19
SMARCD3-202ENST00000356800 U3KQE9 123 aa13.88□□□□□ -0.19
SMARCD3-202ENST00000356800 H3BQ15 152 aa13.87□□□□□ -0.19
SMARCD3-202ENST00000356800 IGLC2P0DOY2 106 aa13.87□□□□□ -0.19
SMARCD3-202ENST00000356800 MYCNOSP40205 109 aa13.87□□□□□ -0.19
SMARCD3-202ENST00000356800 RPEL1Q2QD12 228 aa13.87□□□□□ -0.19
SMARCD3-202ENST00000356800 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.87□□□□□ -0.19
SMARCD3-202ENST00000356800 KLHL30-AS1Q8NEE0 82 aa13.87□□□□□ -0.19
SMARCD3-202ENST00000356800 WFDC12Q8WWY7 111 aa13.87□□□□□ -0.19
SMARCD3-202ENST00000356800 METTL26Q96S19 204 aa13.87□□□□□ -0.19
SMARCD3-202ENST00000356800 CITED2Q99967 270 aaPredicted RBP13.87□□□□□ -0.19
SMARCD3-202ENST00000356800 TCEAL7Q9BRU2 100 aa13.87□□□□□ -0.19
SMARCD3-202ENST00000356800 IGHV3-49A0A0A0MS15 119 aa13.86□□□□□ -0.19
SMARCD3-202ENST00000356800 ZNF320A2RRD8 509 aa13.86□□□□□ -0.19
SMARCD3-202ENST00000356800 ZNF727A8MUV8 499 aa13.86□□□□□ -0.19
SMARCD3-202ENST00000356800 BUB3O43684 328 aa13.86□□□□□ -0.19
SMARCD3-202ENST00000356800 KRTAP10-3P60369 221 aa13.86□□□□□ -0.19
SMARCD3-202ENST00000356800 SUMO1P63165 101 aaKnown RBP13.86□□□□□ -0.19
SMARCD3-202ENST00000356800 OR4F17Q8NGA8 305 aa13.86□□□□□ -0.19
SMARCD3-202ENST00000356800 RPUSD4Q96CM3 377 aaKnown RBP13.86□□□□□ -0.19
SMARCD3-202ENST00000356800 SMIM7Q9BQ49 75 aa13.86□□□□□ -0.19
SMARCD3-202ENST00000356800 ZNF586Q9NXT0 402 aa13.86□□□□□ -0.19
SMARCD3-202ENST00000356800 IGHV3OR16-13A0A075B7E8 117 aa13.85□□□□□ -0.19
SMARCD3-202ENST00000356800 IGHV3-74A0A0B4J1X5 117 aa13.85□□□□□ -0.19
SMARCD3-202ENST00000356800 IGHV3-66A0A0C4DH42 116 aa13.85□□□□□ -0.19
SMARCD3-202ENST00000356800 SCO2A0A1W2PP80 73 aa13.85□□□□□ -0.19
SMARCD3-202ENST00000356800 SCO1O75880 301 aa13.85□□□□□ -0.19
SMARCD3-202ENST00000356800 NDUFB4O95168 129 aa13.85□□□□□ -0.19
SMARCD3-202ENST00000356800 RPL7P18124 248 aaKnown RBP13.85□□□□□ -0.19
SMARCD3-202ENST00000356800 HOXD3P31249 432 aaPredicted RBP13.85□□□□□ -0.19
SMARCD3-202ENST00000356800 FAM106AQ4KMX7 169 aa13.85□□□□□ -0.19
SMARCD3-202ENST00000356800 PNRC1Q12796 327 aaPredicted RBP13.85□□□□□ -0.19
SMARCD3-202ENST00000356800 TM4SF20Q53R12 229 aa13.85□□□□□ -0.19
SMARCD3-202ENST00000356800 C1orf194Q5T5A4 169 aa13.85□□□□□ -0.19
SMARCD3-202ENST00000356800 C8orf86Q6ZUL3 223 aa13.85□□□□□ -0.19
SMARCD3-202ENST00000356800 BLNKQ8WV28 456 aa13.85□□□□□ -0.19
SMARCD3-202ENST00000356800 TVP23CQ96ET8 276 aa13.85□□□□□ -0.19
SMARCD3-202ENST00000356800 DUX3Q96PT4 197 aa13.85□□□□□ -0.19
SMARCD3-202ENST00000356800 TRBV19A0A075B6N1 114 aa13.84□□□□□ -0.19
SMARCD3-202ENST00000356800 A0A1W2PRX2 142 aa13.84□□□□□ -0.19
SMARCD3-202ENST00000356800 H3BTX0 84 aa13.84□□□□□ -0.19
SMARCD3-202ENST00000356800 EDN2P20800 178 aa13.84□□□□□ -0.19
SMARCD3-202ENST00000356800 RANP62826 216 aaKnown RBP13.84□□□□□ -0.19
SMARCD3-202ENST00000356800 ZNF674Q2M3X9 581 aa13.84□□□□□ -0.19
SMARCD3-202ENST00000356800 OR11H1Q8NG94 326 aa13.84□□□□□ -0.19
SMARCD3-202ENST00000356800 ELOVL1Q9BW60 279 aa13.84□□□□□ -0.19
SMARCD3-202ENST00000356800 SDF2L1Q9HCN8 221 aa13.84□□□□□ -0.19
SMARCD3-202ENST00000356800 NAT8Q9UHE5 227 aa13.84□□□□□ -0.19
SMARCD3-202ENST00000356800 TSSC4Q9Y5U2 329 aaPredicted RBP13.84□□□□□ -0.19
SMARCD3-202ENST00000356800 M0R036 132 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms