RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 TIMM21Q9BVV7 248 aa13.15□□□□□ -0.3
RXRA-201ENST00000356384 RFNGQ9Y644 331 aa13.15□□□□□ -0.3
RXRA-201ENST00000356384 IGLV3-32A0A0A0MS00 114 aa13.15□□□□□ -0.3
RXRA-201ENST00000356384 EFNA4P52798 201 aa13.15□□□□□ -0.3
RXRA-201ENST00000356384 PSG3Q16557 428 aa13.15□□□□□ -0.3
RXRA-201ENST00000356384 C1orf194Q5T5A4 169 aa13.15□□□□□ -0.3
RXRA-201ENST00000356384 PIP4P2Q8N4L2 257 aa13.15□□□□□ -0.3
RXRA-201ENST00000356384 MCRIP2Q9BUT9 160 aaKnown RBP13.15□□□□□ -0.3
RXRA-201ENST00000356384 PSPNO60542 156 aa13.15□□□□□ -0.31
RXRA-201ENST00000356384 IGLV3-19P01714 112 aa13.15□□□□□ -0.31
RXRA-201ENST00000356384 LINC00477Q96M19 166 aa13.15□□□□□ -0.31
RXRA-201ENST00000356384 C3orf79P0CE67 100 aa13.14□□□□□ -0.31
RXRA-201ENST00000356384 RASL11AQ6T310 242 aa13.14□□□□□ -0.31
RXRA-201ENST00000356384 DNAJC30Q96LL9 226 aa13.14□□□□□ -0.31
RXRA-201ENST00000356384 A0A0G2JMZ2 1700 aa13.14□□□□□ -0.31
RXRA-201ENST00000356384 ALPK2Q86TB3 2170 aa13.14□□□□□ -0.31
RXRA-201ENST00000356384 KIR3DS1Q14943 382 aa13.14□□□□□ -0.31
RXRA-201ENST00000356384 ZNF329Q86UD4 541 aa13.14□□□□□ -0.31
RXRA-201ENST00000356384 RPP25LQ8N5L8 163 aaKnown RBP13.14□□□□□ -0.31
RXRA-201ENST00000356384 CD177Q8N6Q3 437 aa13.14□□□□□ -0.31
RXRA-201ENST00000356384 OVOL2Q9BRP0 275 aa13.14□□□□□ -0.31
RXRA-201ENST00000356384 KLF12Q9Y4X4 402 aa13.14□□□□□ -0.31
RXRA-201ENST00000356384 DSCR9P59020 149 aa13.14□□□□□ -0.31
RXRA-201ENST00000356384 TRBV7-1A0A0A6YYK4 115 aa13.14□□□□□ -0.31
RXRA-201ENST00000356384 ZC2HC1BQ5TFG8 222 aa13.14□□□□□ -0.31
RXRA-201ENST00000356384 LCNL1Q6ZST4 164 aa13.13□□□□□ -0.31
RXRA-201ENST00000356384 GLRX5Q86SX6 157 aa13.13□□□□□ -0.31
RXRA-201ENST00000356384 DEFB130BP0DP73 79 aa13.13□□□□□ -0.31
RXRA-201ENST00000356384 DEFB130AP0DP74 79 aa13.13□□□□□ -0.31
RXRA-201ENST00000356384 SS18Q15532 418 aa13.13□□□□□ -0.31
RXRA-201ENST00000356384 ABCA7Q8IZY2 2146 aa13.13□□□□□ -0.31
RXRA-201ENST00000356384 IGKV1-27A0A075B6S5 117 aa13.13□□□□□ -0.31
RXRA-201ENST00000356384 CYTL1Q9NRR1 136 aa13.13□□□□□ -0.31
RXRA-201ENST00000356384 TMEM178BH3BS89 294 aa13.13□□□□□ -0.31
RXRA-201ENST00000356384 KLHL30-AS1Q8NEE0 82 aa13.13□□□□□ -0.31
RXRA-201ENST00000356384 SYS1-DBNDD2H3BUS1 97 aa13.13□□□□□ -0.31
RXRA-201ENST00000356384 RALGAPA1Q6GYQ0 2036 aa13.12□□□□□ -0.31
RXRA-201ENST00000356384 J3QRE1 110 aa13.12□□□□□ -0.31
RXRA-201ENST00000356384 IGKV1-5P01602 117 aa13.12□□□□□ -0.31
RXRA-201ENST00000356384 DLEU1O43261 78 aa13.12□□□□□ -0.31
RXRA-201ENST00000356384 MINOS1Q5TGZ0 78 aa13.12□□□□□ -0.31
RXRA-201ENST00000356384 MINOS1-NBL1R4GNA1 71 aa13.12□□□□□ -0.31
RXRA-201ENST00000356384 C9JAW5 83 aa13.12□□□□□ -0.31
RXRA-201ENST00000356384 C5orf64Q2M2E5 130 aa13.12□□□□□ -0.31
RXRA-201ENST00000356384 AMN1Q8IY45 258 aa13.12□□□□□ -0.31
RXRA-201ENST00000356384 H0YJW9 148 aa13.12□□□□□ -0.31
RXRA-201ENST00000356384 TRAV1-1A0A0B4J248 108 aa13.11□□□□□ -0.31
RXRA-201ENST00000356384 SUPT4H1P63272 117 aaKnown RBP13.11□□□□□ -0.31
RXRA-201ENST00000356384 SUMO4Q6EEV6 95 aa13.11□□□□□ -0.31
RXRA-201ENST00000356384 C5orf24Q7Z6I8 188 aa13.11□□□□□ -0.31
RXRA-201ENST00000356384 LY6G5BQ8NDX9 201 aa13.11□□□□□ -0.31
RXRA-201ENST00000356384 NTF4P34130 210 aa13.11□□□□□ -0.31
RXRA-201ENST00000356384 ZNF114Q8NC26 417 aa13.11□□□□□ -0.31
RXRA-201ENST00000356384 B4DSR2 109 aa13.1□□□□□ -0.31
RXRA-201ENST00000356384 CHAC1Q9BUX1 264 aa13.1□□□□□ -0.31
RXRA-201ENST00000356384 RHPN1-AS1Q9BWJ2 59 aa13.1□□□□□ -0.31
RXRA-201ENST00000356384 LHFPL1Q86WI0 220 aa13.1□□□□□ -0.31
RXRA-201ENST00000356384 CNOT1A5YKK6 2376 aaKnown RBP13.1□□□□□ -0.31
RXRA-201ENST00000356384 TMEM190Q8WZ59 177 aa13.1□□□□□ -0.31
RXRA-201ENST00000356384 NABP1Q96AH0 204 aa13.1□□□□□ -0.31
RXRA-201ENST00000356384 RNF5Q99942 180 aa13.1□□□□□ -0.31
RXRA-201ENST00000356384 C1QTNF4Q9BXJ3 329 aa13.1□□□□□ -0.31
RXRA-201ENST00000356384 MYOFQ9NZM1 2061 aa13.1□□□□□ -0.31
RXRA-201ENST00000356384 SPINK8P0C7L1 97 aa13.09□□□□□ -0.31
RXRA-201ENST00000356384 TMEM14EPQ6UXP3 125 aa13.09□□□□□ -0.31
RXRA-201ENST00000356384 LIME1Q9H400 295 aa13.09□□□□□ -0.31
RXRA-201ENST00000356384 PLSCR4Q9NRQ2 329 aa13.09□□□□□ -0.31
RXRA-201ENST00000356384 COX11Q9Y6N1 276 aa13.09□□□□□ -0.31
RXRA-201ENST00000356384 PTPRFP10586 1907 aa13.09□□□□□ -0.31
RXRA-201ENST00000356384 LRRC37A2A6NM11 1700 aa13.09□□□□□ -0.31
RXRA-201ENST00000356384 EFNA2O43921 213 aa13.09□□□□□ -0.31
RXRA-201ENST00000356384 GGNQ86UU5 652 aa13.09□□□□□ -0.31
RXRA-201ENST00000356384 OOSP1A8MZH6 123 aa13.09□□□□□ -0.31
RXRA-201ENST00000356384 GNLYP22749 145 aa13.09□□□□□ -0.31
RXRA-201ENST00000356384 ZFP36L1Q07352 338 aaKnown RBP13.09□□□□□ -0.31
RXRA-201ENST00000356384 NMSQ5H8A3 153 aa13.09□□□□□ -0.31
RXRA-201ENST00000356384 A0A1B0GW64 132 aa13.09□□□□□ -0.31
RXRA-201ENST00000356384 BUB1B-PAK6H3BSN5 160 aa13.09□□□□□ -0.31
RXRA-201ENST00000356384 CSRP1P21291 193 aaKnown RBP13.09□□□□□ -0.31
RXRA-201ENST00000356384 FLVCR1-AS1Q8TAF5 88 aa13.09□□□□□ -0.31
RXRA-201ENST00000356384 SNHG12Q9BXW3 62 aa13.09□□□□□ -0.31
RXRA-201ENST00000356384 LINC00473A8K010 186 aa13.08□□□□□ -0.32
RXRA-201ENST00000356384 ADAMTSL5Q6ZMM2 481 aa13.08□□□□□ -0.32
RXRA-201ENST00000356384 ZNF236Q9UL36 1845 aa13.08□□□□□ -0.32
RXRA-201ENST00000356384 LINC00205P59089 165 aa13.08□□□□□ -0.32
RXRA-201ENST00000356384 MSRB2Q9Y3D2 182 aa13.08□□□□□ -0.32
RXRA-201ENST00000356384 USMG5Q96IX5 58 aa13.08□□□□□ -0.32
RXRA-201ENST00000356384 SIGLEC9Q9Y336 463 aa13.07□□□□□ -0.32
RXRA-201ENST00000356384 RLFQ13129 1914 aa13.07□□□□□ -0.32
RXRA-201ENST00000356384 KNCNA6PVL3 124 aa13.07□□□□□ -0.32
RXRA-201ENST00000356384 RBMY1FQ15415 496 aaKnown RBP13.07□□□□□ -0.32
RXRA-201ENST00000356384 GAFA1Q96PS6 74 aa13.07□□□□□ -0.32
RXRA-201ENST00000356384 LCTP09848 1927 aa13.07□□□□□ -0.32
RXRA-201ENST00000356384 TMEM126AQ9H061 195 aa13.07□□□□□ -0.32
RXRA-201ENST00000356384 RALGAPA2Q2PPJ7 1873 aa13.06□□□□□ -0.32
RXRA-201ENST00000356384 UBE2V1Q13404 147 aa13.06□□□□□ -0.32
RXRA-201ENST00000356384 STPG4Q8N801 248 aa13.06□□□□□ -0.32
RXRA-201ENST00000356384 MRPL27Q9P0M9 148 aaKnown RBP13.06□□□□□ -0.32
RXRA-201ENST00000356384 FAM223BA6NKX1 122 aa13.06□□□□□ -0.32
RXRA-201ENST00000356384 OVOL3O00110 214 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms