RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 NEUROG1Q92886 237 aa11.51□□□□□ -0.57
SREBF1-202ENST00000355815 SCRT1Q9BWW7 348 aa11.51□□□□□ -0.57
SREBF1-202ENST00000355815 NUP210LQ5VU65 1888 aa11.51□□□□□ -0.57
SREBF1-202ENST00000355815 CEP192Q8TEP8 1941 aa11.51□□□□□ -0.57
SREBF1-202ENST00000355815 LY6HO94772 140 aa11.51□□□□□ -0.57
SREBF1-202ENST00000355815 GAGE13Q4V321 117 aa11.51□□□□□ -0.57
SREBF1-202ENST00000355815 FER1L6-AS1Q8NA97 138 aa11.51□□□□□ -0.57
SREBF1-202ENST00000355815 OR4C13Q8NGP0 309 aa11.51□□□□□ -0.57
SREBF1-202ENST00000355815 PRR7Q8TB68 274 aa11.51□□□□□ -0.57
SREBF1-202ENST00000355815 EPDR1Q9UM22 224 aa11.51□□□□□ -0.57
SREBF1-202ENST00000355815 SRRM5B3KS81 715 aa11.5□□□□□ -0.57
SREBF1-202ENST00000355815 K7EM74 188 aa11.5□□□□□ -0.57
SREBF1-202ENST00000355815 TSPAN13O95857 204 aa11.5□□□□□ -0.57
SREBF1-202ENST00000355815 PAX2Q02962 417 aa11.5□□□□□ -0.57
SREBF1-202ENST00000355815 C19orf24Q9BVV8 132 aa11.5□□□□□ -0.57
SREBF1-202ENST00000355815 MGAQ8IWI9 3026 aa11.5□□□□□ -0.57
SREBF1-202ENST00000355815 SETD2Q9BYW2 2564 aaPredicted RBP11.5□□□□□ -0.57
SREBF1-202ENST00000355815 J3QW42 95 aa11.5□□□□□ -0.57
SREBF1-202ENST00000355815 IGHV1-46P01743 117 aa11.5□□□□□ -0.57
SREBF1-202ENST00000355815 CFAP161Q6P656 301 aa11.5□□□□□ -0.57
SREBF1-202ENST00000355815 CITED1Q99966 193 aa11.5□□□□□ -0.57
SREBF1-202ENST00000355815 NACAE9PAV3 2078 aa11.5□□□□□ -0.57
SREBF1-202ENST00000355815 IGKV1-16P04430 117 aa11.5□□□□□ -0.57
SREBF1-202ENST00000355815 COX6CP09669 75 aa11.5□□□□□ -0.57
SREBF1-202ENST00000355815 SCGB1A1P11684 91 aa11.5□□□□□ -0.57
SREBF1-202ENST00000355815 TEX29Q8N6K0 151 aa11.5□□□□□ -0.57
SREBF1-202ENST00000355815 OR5A1Q8NGJ0 315 aa11.5□□□□□ -0.57
SREBF1-202ENST00000355815 C18orf32Q8TCD1 76 aa11.5□□□□□ -0.57
SREBF1-202ENST00000355815 LGALS7P47929 136 aa11.49□□□□□ -0.57
SREBF1-202ENST00000355815 DLX6P56179 175 aa11.49□□□□□ -0.57
SREBF1-202ENST00000355815 ADAMTSL5Q6ZMM2 481 aa11.49□□□□□ -0.57
SREBF1-202ENST00000355815 CHODLQ9H9P2 273 aa11.49□□□□□ -0.57
SREBF1-202ENST00000355815 PLSCR4Q9NRQ2 329 aa11.49□□□□□ -0.57
SREBF1-202ENST00000355815 PHLDA3Q9Y5J5 127 aa11.49□□□□□ -0.57
SREBF1-202ENST00000355815 SLC25A15Q9Y619 301 aa11.49□□□□□ -0.57
SREBF1-202ENST00000355815 NBEAQ8NFP9 2946 aa11.49□□□□□ -0.57
SREBF1-202ENST00000355815 SAP30O75446 220 aa11.49□□□□□ -0.57
SREBF1-202ENST00000355815 HSD52Q0P140 79 aa11.49□□□□□ -0.57
SREBF1-202ENST00000355815 VWC2Q2TAL6 325 aa11.49□□□□□ -0.57
SREBF1-202ENST00000355815 EXOC3-AS1Q8N2X6 119 aa11.49□□□□□ -0.57
SREBF1-202ENST00000355815 TNFRSF14Q92956 283 aa11.49□□□□□ -0.57
SREBF1-202ENST00000355815 FBXL15Q9H469 300 aa11.49□□□□□ -0.57
SREBF1-202ENST00000355815 MBNL3Q9NUK0 354 aaKnown RBP11.49□□□□□ -0.57
SREBF1-202ENST00000355815 TLN2Q9Y4G6 2542 aa11.49□□□□□ -0.57
SREBF1-202ENST00000355815 SAA1P0DJI8 122 aaPredicted RBP11.49□□□□□ -0.57
SREBF1-202ENST00000355815 GAGE1Q13065 139 aa11.49□□□□□ -0.57
SREBF1-202ENST00000355815 SLAQ13239 276 aa11.49□□□□□ -0.57
SREBF1-202ENST00000355815 MRPS16Q9Y3D3 137 aaKnown RBP11.49□□□□□ -0.57
SREBF1-202ENST00000355815 TSSC4Q9Y5U2 329 aaPredicted RBP11.49□□□□□ -0.57
SREBF1-202ENST00000355815 FOXA2Q9Y261 457 aaPredicted RBP11.48□□□□□ -0.57
SREBF1-202ENST00000355815 CYSLTR1Q9Y271 337 aa11.48□□□□□ -0.57
SREBF1-202ENST00000355815 C15orf62A8K5M9 175 aa11.48□□□□□ -0.57
SREBF1-202ENST00000355815 HBDP02042 147 aa11.48□□□□□ -0.57
SREBF1-202ENST00000355815 RNASE1P07998 156 aaKnown RBP11.48□□□□□ -0.57
SREBF1-202ENST00000355815 LGALS3P17931 250 aaKnown RBP11.48□□□□□ -0.57
SREBF1-202ENST00000355815 ZNF134P52741 427 aa11.48□□□□□ -0.57
SREBF1-202ENST00000355815 SMKR1H3BMG3 65 aa11.48□□□□□ -0.57
SREBF1-202ENST00000355815 CD5LO43866 347 aa11.48□□□□□ -0.57
SREBF1-202ENST00000355815 MMP23AO75900 390 aa11.48□□□□□ -0.57
SREBF1-202ENST00000355815 IGKV3-20P01619 116 aa11.48□□□□□ -0.57
SREBF1-202ENST00000355815 ADIPOQQ15848 244 aa11.48□□□□□ -0.57
SREBF1-202ENST00000355815 CCDC168Q8NDH2 2452 aa11.47□□□□□ -0.57
SREBF1-202ENST00000355815 OR4X2Q8NGF9 303 aa11.47□□□□□ -0.57
SREBF1-202ENST00000355815 SCGB3A1Q96QR1 104 aa11.47□□□□□ -0.57
SREBF1-202ENST00000355815 DSPP15924 2871 aaKnown RBP11.47□□□□□ -0.57
SREBF1-202ENST00000355815 CDKN1BP46527 198 aa11.47□□□□□ -0.57
SREBF1-202ENST00000355815 MYO9AB2RTY4 2548 aa11.47□□□□□ -0.57
SREBF1-202ENST00000355815 D6R8Y8 96 aa11.47□□□□□ -0.57
SREBF1-202ENST00000355815 K7EP13 123 aa11.47□□□□□ -0.57
SREBF1-202ENST00000355815 ERVK11-1P61568 191 aa11.47□□□□□ -0.57
SREBF1-202ENST00000355815 PRR30Q53SZ7 412 aaPredicted RBP11.47□□□□□ -0.57
SREBF1-202ENST00000355815 Q6ZS49 121 aa11.47□□□□□ -0.57
SREBF1-202ENST00000355815 C1orf162Q8NEQ5 155 aaPredicted RBP11.47□□□□□ -0.57
SREBF1-202ENST00000355815 CLUHP3Q96NS8 147 aa11.47□□□□□ -0.57
SREBF1-202ENST00000355815 UBTD1Q9HAC8 227 aa11.47□□□□□ -0.57
SREBF1-202ENST00000355815 LRP4O75096 1905 aa11.47□□□□□ -0.57
SREBF1-202ENST00000355815 TANC2Q9HCD6 1990 aa11.47□□□□□ -0.57
SREBF1-202ENST00000355815 TRAV12-3A0A0B4J271 114 aa11.46□□□□□ -0.57
SREBF1-202ENST00000355815 TEX45Q8NA69 505 aa11.46□□□□□ -0.57
SREBF1-202ENST00000355815 C16orf92Q96LL3 132 aa11.46□□□□□ -0.57
SREBF1-202ENST00000355815 NPIPB5A8MRT5 1133 aa11.46□□□□□ -0.57
SREBF1-202ENST00000355815 NPIPB11E5RHQ5 1161 aa11.46□□□□□ -0.57
SREBF1-202ENST00000355815 YPEL1O60688 119 aa11.46□□□□□ -0.57
SREBF1-202ENST00000355815 YPEL2Q96QA6 119 aa11.46□□□□□ -0.57
SREBF1-202ENST00000355815 NAV3Q8IVL0 2385 aa11.46□□□□□ -0.58
SREBF1-202ENST00000355815 C17orf100A8MU93 164 aa11.46□□□□□ -0.58
SREBF1-202ENST00000355815 IGHV4-39P01824 125 aa11.46□□□□□ -0.58
SREBF1-202ENST00000355815 CEACAM3P40198 252 aa11.45□□□□□ -0.58
SREBF1-202ENST00000355815 C10orf126Q8N4M7 172 aa11.45□□□□□ -0.58
SREBF1-202ENST00000355815 TRBV6-6A0A0A6YYG2 114 aa11.45□□□□□ -0.58
SREBF1-202ENST00000355815 C15orf61A6NNL5 157 aa11.45□□□□□ -0.58
SREBF1-202ENST00000355815 SPINK8P0C7L1 97 aa11.45□□□□□ -0.58
SREBF1-202ENST00000355815 CD69Q07108 199 aa11.45□□□□□ -0.58
SREBF1-202ENST00000355815 Q0VG73 95 aa11.45□□□□□ -0.58
SREBF1-202ENST00000355815 SRSF7Q16629 238 aaKnown RBP eCLIP11.45□□□□□ -0.581e-6■■□□□ 12.8
SREBF1-202ENST00000355815 PLA2G2CQ5R387 149 aa11.45□□□□□ -0.58
SREBF1-202ENST00000355815 ZC2HC1BQ5TFG8 222 aa11.45□□□□□ -0.58
SREBF1-202ENST00000355815 AMTNQ6UX39 209 aa11.45□□□□□ -0.58
SREBF1-202ENST00000355815 OR5AN1Q8NGI8 311 aa11.45□□□□□ -0.58
SREBF1-202ENST00000355815 USP9YO00507 2555 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms