RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 TMEM133Q9H2Q1 129 aa4.28□□□□□ -1.73
CD47-201ENST00000355354 DYNC1H1Q14204 4646 aaKnown RBP4.28□□□□□ -1.73
CD47-201ENST00000355354 FAM90A16PA6NEW6 464 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 FAM90A8PA6NJQ4 464 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 GJE1A6NN92 205 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 F6UZH7 168 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 PHYHO14832 338 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 KRTDAPP60985 99 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 SLC24A4Q8NFF2 622 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 J3QT63 122 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 K7EIM0 57 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 GCHFRP30047 84 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 DLX6P56179 175 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 ANXA2RQ3ZCQ2 193 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 BRD3OSQ6XYD6 125 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 ZNF788Q6ZQV5 615 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 SH2D6Q7Z4S9 175 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 OR4A5Q8NH83 315 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 TNFRSF14Q92956 283 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 WI2-2373I1.2A0A1W2PRP0 233 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 TMEM11P17152 192 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 TNFRSF1AP19438 455 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 ATP5G2Q06055 141 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 C9orf129Q5T035 196 aaKnown RBP4.27□□□□□ -1.73
CD47-201ENST00000355354 STUMQ69YW2 141 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 Q6ZT83 130 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 KLHL30-AS1Q8NEE0 82 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 FLYWCH2Q96CP2 140 aaKnown RBP4.27□□□□□ -1.73
CD47-201ENST00000355354 BTF3L4Q96K17 158 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 ATPIF1Q9UII2 106 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 HHLA3Q9XRX5 114 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 C14orf166Q9Y224 244 aaKnown RBP4.27□□□□□ -1.73
CD47-201ENST00000355354 DNAH5Q8TE73 4624 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 IGKV2-40A0A087WW87 121 aaPredicted RBP4.27□□□□□ -1.73
CD47-201ENST00000355354 TRAV1-1A0A0B4J248 108 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 TRAPPC2LH3BP13 241 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 IGKV2D-40P01614 121 aaPredicted RBP4.27□□□□□ -1.73
CD47-201ENST00000355354 TIMM23BQ5SRD1 257 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 TEX43Q6ZNM6 134 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 ZNF709Q8N972 641 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 OR2T10Q8NGZ9 312 aa4.27□□□□□ -1.73
CD47-201ENST00000355354 ALKBH7Q9BT30 221 aaPredicted RBP4.27□□□□□ -1.73
CD47-201ENST00000355354 IGLV1-47P01700 117 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 CRIP2P52943 208 aaPredicted RBP4.26□□□□□ -1.73
CD47-201ENST00000355354 TAS2R46P59540 309 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 ARF6P62330 175 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 CEMP1Q6PRD7 247 aaPredicted RBP4.26□□□□□ -1.73
CD47-201ENST00000355354 FAM169BQ8N8A8 192 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 OR8B2Q96RD0 313 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 CALYQ9NYX4 217 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 DLEU1O43261 78 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 IFNA10P01566 189 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 IFNA17P01571 189 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 OR5G3P0C626 314 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 IGHV4-31P0DP07 118 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 TPPP2P59282 170 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 C14orf178Q8N769 122 aaPredicted RBP4.26□□□□□ -1.73
CD47-201ENST00000355354 SAMD10Q9BYL1 202 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 SLC39A9Q9NUM3 307 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 GNG12Q9UBI6 72 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 IGHV1-24A0A0C4DH33 117 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 P0DMU3 169 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 FAM231AP0DMU4 169 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 FAM231CP0DMU5 169 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 FKBP2P26885 142 aaKnown RBP4.26□□□□□ -1.73
CD47-201ENST00000355354 SMCPP49901 116 aaPredicted RBP4.26□□□□□ -1.73
CD47-201ENST00000355354 TMEM241Q24JQ0 296 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 GLMPQ8WWB7 406 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 CIB3Q96Q77 187 aaPredicted RBP4.26□□□□□ -1.73
CD47-201ENST00000355354 VAX2Q9UIW0 290 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 FXYD2P54710 66 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 Q6ZS49 121 aa4.26□□□□□ -1.73
CD47-201ENST00000355354 RNASE11Q8TAA1 199 aaKnown RBP4.26□□□□□ -1.73
CD47-201ENST00000355354 ACTR3CQ9C0K3 210 aaPredicted RBP4.26□□□□□ -1.73
CD47-201ENST00000355354 LOC389332A0A1B0GUA5 103 aa4.25□□□□□ -1.73
CD47-201ENST00000355354 A0A1B0GXF2 115 aa4.25□□□□□ -1.73
CD47-201ENST00000355354 S100A9P06702 114 aaKnown RBP4.25□□□□□ -1.73
CD47-201ENST00000355354 NPY1RP25929 384 aa4.25□□□□□ -1.73
CD47-201ENST00000355354 IFI27P40305 119 aaPredicted RBP4.25□□□□□ -1.73
CD47-201ENST00000355354 CNN1P51911 297 aaKnown RBP4.25□□□□□ -1.73
CD47-201ENST00000355354 YPEL3P61236 119 aaPredicted RBP4.25□□□□□ -1.73
CD47-201ENST00000355354 HERV-K104P61576 105 aa4.25□□□□□ -1.73
CD47-201ENST00000355354 ZNF329Q86UD4 541 aa4.25□□□□□ -1.73
CD47-201ENST00000355354 OR8G5Q8NG78 346 aa4.25□□□□□ -1.73
CD47-201ENST00000355354 ARPC4-TTLL3A0A0A6YYG9 625 aa4.25□□□□□ -1.73
CD47-201ENST00000355354 SSBP1Q04837 148 aaKnown RBP4.25□□□□□ -1.73
CD47-201ENST00000355354 AARDQ4LEZ3 155 aa4.25□□□□□ -1.73
CD47-201ENST00000355354 C1orf194Q5T5A4 169 aa4.25□□□□□ -1.73
CD47-201ENST00000355354 BHLHA15Q7RTS1 189 aaPredicted RBP4.25□□□□□ -1.73
CD47-201ENST00000355354 SPTSSAQ969W0 71 aa4.25□□□□□ -1.73
CD47-201ENST00000355354 HEYLQ9NQ87 328 aaPredicted RBP4.25□□□□□ -1.73
CD47-201ENST00000355354 OR7C2O60412 319 aa4.25□□□□□ -1.73
CD47-201ENST00000355354 USF1P22415 310 aaPredicted RBP4.25□□□□□ -1.73
CD47-201ENST00000355354 COX7A1P24310 79 aa4.25□□□□□ -1.73
CD47-201ENST00000355354 AMTP48728 403 aa4.25□□□□□ -1.73
CD47-201ENST00000355354 FOXL1Q12952 345 aa4.25□□□□□ -1.73
CD47-201ENST00000355354 C3orf56Q8N813 242 aa4.25□□□□□ -1.73
CD47-201ENST00000355354 C2orf88Q9BSF0 95 aa4.25□□□□□ -1.73
CD47-201ENST00000355354 CYSTM1Q9H1C7 97 aa4.25□□□□□ -1.73
CD47-201ENST00000355354 IQCF6A8MYZ5 107 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms