RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 CXCL3P19876 107 aa16.2■□□□□ 0.18
SNX3-202ENST00000349379 MEOX2P50222 304 aa16.2■□□□□ 0.18
SNX3-202ENST00000349379 BAXQ07812 192 aa16.2■□□□□ 0.18
SNX3-202ENST00000349379 RAB31Q13636 194 aa16.2■□□□□ 0.18
SNX3-202ENST00000349379 OPCMLQ14982 345 aa16.2■□□□□ 0.18
SNX3-202ENST00000349379 SAMD13Q5VXD3 122 aa16.2■□□□□ 0.18
SNX3-202ENST00000349379 MUC7Q8TAX7 377 aa16.2■□□□□ 0.18
SNX3-202ENST00000349379 C3orf84H3BNL1 204 aa16.19■□□□□ 0.18
SNX3-202ENST00000349379 ISLRO14498 428 aa16.19■□□□□ 0.18
SNX3-202ENST00000349379 ACTL10Q5JWF8 245 aa16.19■□□□□ 0.18
SNX3-202ENST00000349379 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.19■□□□□ 0.18
SNX3-202ENST00000349379 S100A7AQ86SG5 101 aa16.19■□□□□ 0.18
SNX3-202ENST00000349379 OR5C1Q8NGR4 320 aa16.19■□□□□ 0.18
SNX3-202ENST00000349379 TMEM37Q8WXS4 190 aa16.19■□□□□ 0.18
SNX3-202ENST00000349379 GIG44P09565 113 aaPredicted RBP16.18■□□□□ 0.18
SNX3-202ENST00000349379 PET100P0DJ07 73 aa16.18■□□□□ 0.18
SNX3-202ENST00000349379 RPL7P18124 248 aaKnown RBP16.18■□□□□ 0.18
SNX3-202ENST00000349379 ID1P41134 155 aa16.18■□□□□ 0.18
SNX3-202ENST00000349379 RPL29P47914 159 aaKnown RBP16.18■□□□□ 0.18
SNX3-202ENST00000349379 MIC13Q5XKP0 118 aa16.18■□□□□ 0.18
SNX3-202ENST00000349379 RSG1Q9BU20 258 aa16.18■□□□□ 0.18
SNX3-202ENST00000349379 MRPS12O15235 138 aaKnown RBP16.17■□□□□ 0.18
SNX3-202ENST00000349379 MPDU1O75352 247 aa16.17■□□□□ 0.18
SNX3-202ENST00000349379 SPP1P10451 314 aa16.17■□□□□ 0.18
SNX3-202ENST00000349379 LYL1P12980 280 aa16.17■□□□□ 0.18
SNX3-202ENST00000349379 MORN3Q6PF18 240 aaPredicted RBP16.17■□□□□ 0.18
SNX3-202ENST00000349379 OR11H7Q8NGC8 314 aa16.17■□□□□ 0.18
SNX3-202ENST00000349379 RNF24Q9Y225 148 aa16.17■□□□□ 0.18
SNX3-202ENST00000349379 ELOA3CA0A087WX78 387 aaPredicted RBP16.16■□□□□ 0.18
SNX3-202ENST00000349379 A0A087X0K7 114 aa16.16■□□□□ 0.18
SNX3-202ENST00000349379 H3BMM0 161 aa16.16■□□□□ 0.18
SNX3-202ENST00000349379 CA1P00915 261 aaPredicted RBP16.16■□□□□ 0.18
SNX3-202ENST00000349379 HLA-DRB4P13762 266 aa16.16■□□□□ 0.18
SNX3-202ENST00000349379 FGF7P21781 194 aa16.16■□□□□ 0.18
SNX3-202ENST00000349379 FCN2Q15485 313 aa16.16■□□□□ 0.18
SNX3-202ENST00000349379 RGS21Q2M5E4 152 aa16.16■□□□□ 0.18
SNX3-202ENST00000349379 LINC00305Q7Z4B0 112 aa16.16■□□□□ 0.18
SNX3-202ENST00000349379 GATAD1Q8WUU5 269 aa16.16■□□□□ 0.18
SNX3-202ENST00000349379 HLA-DRB4X5D2U9 266 aa16.16■□□□□ 0.18
SNX3-202ENST00000349379 COX7A2P2O60397 106 aa16.15■□□□□ 0.18
SNX3-202ENST00000349379 C4BPBP20851 252 aa16.15■□□□□ 0.18
SNX3-202ENST00000349379 OXA1LQ15070 435 aa16.15■□□□□ 0.18
SNX3-202ENST00000349379 Q6ZRG5 221 aa16.15■□□□□ 0.18
SNX3-202ENST00000349379 NPCDR1Q9BY65 106 aa16.15■□□□□ 0.18
SNX3-202ENST00000349379 MED28Q9H204 178 aa16.15■□□□□ 0.18
SNX3-202ENST00000349379 SLC39A9Q9NUM3 307 aa16.15■□□□□ 0.18
SNX3-202ENST00000349379 MBD2Q9UBB5 411 aa16.15■□□□□ 0.18
SNX3-202ENST00000349379 HSPB11Q9Y547 144 aa16.15■□□□□ 0.18
SNX3-202ENST00000349379 DEFB1P60022 68 aa16.14■□□□□ 0.17
SNX3-202ENST00000349379 B2MP61769 119 aa16.14■□□□□ 0.17
SNX3-202ENST00000349379 TMEM41BQ5BJD5 291 aa16.14■□□□□ 0.17
SNX3-202ENST00000349379 GDF5OSQ5U4N7 250 aa16.14■□□□□ 0.17
SNX3-202ENST00000349379 MORN5Q5VZ52 161 aa16.14■□□□□ 0.17
SNX3-202ENST00000349379 C10orf113Q5VZT2 155 aa16.14■□□□□ 0.17
SNX3-202ENST00000349379 FOXI2Q6ZQN5 318 aa16.14■□□□□ 0.17
SNX3-202ENST00000349379 C16orf92Q96LL3 132 aa16.14■□□□□ 0.17
SNX3-202ENST00000349379 C20orf173Q96LM9 149 aa16.14■□□□□ 0.17
SNX3-202ENST00000349379 LINC00052Q96N35 136 aa16.14■□□□□ 0.17
SNX3-202ENST00000349379 SAV1Q9H4B6 383 aaPredicted RBP16.14■□□□□ 0.17
SNX3-202ENST00000349379 DNAJC4Q9NNZ3 241 aa16.14■□□□□ 0.17
SNX3-202ENST00000349379 PXMP4Q9Y6I8 212 aa16.14■□□□□ 0.17
SNX3-202ENST00000349379 TRAV8-2A0A0B4J237 113 aa16.13■□□□□ 0.17
SNX3-202ENST00000349379 ATF4P18848 351 aaPredicted RBP16.13■□□□□ 0.17
SNX3-202ENST00000349379 CLINT1Q14677 625 aa16.13■□□□□ 0.17
SNX3-202ENST00000349379 OR1L4Q8NGR5 311 aa16.13■□□□□ 0.17
SNX3-202ENST00000349379 CLUHP3Q96NS8 147 aa16.13■□□□□ 0.17
SNX3-202ENST00000349379 CSMD3Q7Z407 3707 aa16.13■□□□□ 0.17
SNX3-202ENST00000349379 RPL12P30050 165 aaKnown RBP16.12■□□□□ 0.17
SNX3-202ENST00000349379 CASC10Q5T4H9 136 aa16.12■□□□□ 0.17
SNX3-202ENST00000349379 THAP6Q8TBB0 222 aa16.12■□□□□ 0.17
SNX3-202ENST00000349379 PFDN5Q99471 154 aa16.12■□□□□ 0.17
SNX3-202ENST00000349379 WDR61Q9GZS3 305 aaKnown RBP16.12■□□□□ 0.17
SNX3-202ENST00000349379 STARD9Q9P2P6 4700 aa16.11■□□□□ 0.17
SNX3-202ENST00000349379 SPATA31B1PQ5VZV4 182 aa16.11■□□□□ 0.17
SNX3-202ENST00000349379 CSNK1G2-AS1Q8NCQ2 148 aa16.11■□□□□ 0.17
SNX3-202ENST00000349379 RPRMQ9NS64 109 aa16.11■□□□□ 0.17
SNX3-202ENST00000349379 A8MTW9 85 aa16.1■□□□□ 0.17
SNX3-202ENST00000349379 BPIFA4PQ86YQ2 179 aa16.1■□□□□ 0.17
SNX3-202ENST00000349379 ASB13Q8WXK3 278 aa16.1■□□□□ 0.17
SNX3-202ENST00000349379 ATP5SQ99766 215 aa16.1■□□□□ 0.17
SNX3-202ENST00000349379 A0A0J9YWU9 116 aa16.09■□□□□ 0.17
SNX3-202ENST00000349379 A0A0J9YX75 114 aa16.09■□□□□ 0.17
SNX3-202ENST00000349379 CXCL2P19875 107 aa16.09■□□□□ 0.17
SNX3-202ENST00000349379 FGL1Q08830 312 aa16.09■□□□□ 0.17
SNX3-202ENST00000349379 OR11H2Q8NH07 326 aa16.09■□□□□ 0.17
SNX3-202ENST00000349379 RARRES2Q99969 163 aa16.09■□□□□ 0.17
SNX3-202ENST00000349379 F6UB75 175 aa16.08■□□□□ 0.16
SNX3-202ENST00000349379 GIPP09681 153 aaPredicted RBP16.08■□□□□ 0.16
SNX3-202ENST00000349379 IGLC2P0DOY2 106 aa16.08■□□□□ 0.16
SNX3-202ENST00000349379 IGFL4Q6B9Z1 124 aa16.08■□□□□ 0.16
SNX3-202ENST00000349379 ZNF705EA8MWA4 302 aaPredicted RBP16.07■□□□□ 0.16
SNX3-202ENST00000349379 NUTF2P61970 127 aaKnown RBP16.07■□□□□ 0.16
SNX3-202ENST00000349379 EBLN2Q6P2I7 272 aa16.07■□□□□ 0.16
SNX3-202ENST00000349379 LCN15Q6UWW0 184 aa16.07■□□□□ 0.16
SNX3-202ENST00000349379 RNF182Q8N6D2 247 aa16.07■□□□□ 0.16
SNX3-202ENST00000349379 ZNF709Q8N972 641 aa16.07■□□□□ 0.16
SNX3-202ENST00000349379 IL17DQ8TAD2 202 aa16.07■□□□□ 0.16
SNX3-202ENST00000349379 HRH4Q9H3N8 390 aa16.07■□□□□ 0.16
SNX3-202ENST00000349379 ZNF331Q9NQX6 463 aaPredicted RBP16.07■□□□□ 0.16
SNX3-202ENST00000349379 KCNIP2Q9NS61 270 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms