RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 FGL1Q08830 312 aa11.56□□□□□ -0.56
TSPAN4-201ENST00000346501 TMEM182Q6ZP80 229 aaPredicted RBP11.56□□□□□ -0.56
TSPAN4-201ENST00000346501 FOXI2Q6ZQN5 318 aa11.56□□□□□ -0.56
TSPAN4-201ENST00000346501 ARV1Q9H2C2 271 aa11.56□□□□□ -0.56
TSPAN4-201ENST00000346501 E5RGE8 158 aa11.55□□□□□ -0.56
TSPAN4-201ENST00000346501 H3BMM0 161 aa11.55□□□□□ -0.56
TSPAN4-201ENST00000346501 HLA-DRB4P13762 266 aa11.55□□□□□ -0.56
TSPAN4-201ENST00000346501 BAXQ07812 192 aa11.55□□□□□ -0.56
TSPAN4-201ENST00000346501 ARL16Q0P5N6 197 aa11.55□□□□□ -0.56
TSPAN4-201ENST00000346501 TMEM252Q8N6L7 170 aa11.55□□□□□ -0.56
TSPAN4-201ENST00000346501 SCRT1Q9BWW7 348 aa11.55□□□□□ -0.56
TSPAN4-201ENST00000346501 MFFQ9GZY8 342 aa11.55□□□□□ -0.56
TSPAN4-201ENST00000346501 HLA-DRB4X5D2U9 266 aa11.55□□□□□ -0.56
TSPAN4-201ENST00000346501 HUWE1Q7Z6Z7 4374 aaKnown RBP11.55□□□□□ -0.56
TSPAN4-201ENST00000346501 JTBO76095 146 aa11.54□□□□□ -0.56
TSPAN4-201ENST00000346501 SIX6O95475 246 aa11.54□□□□□ -0.56
TSPAN4-201ENST00000346501 IL15RAQ13261 267 aa11.54□□□□□ -0.56
TSPAN4-201ENST00000346501 LRRC37A5PQ49AS3 106 aa11.54□□□□□ -0.56
TSPAN4-201ENST00000346501 OR4B1Q8NGF8 309 aa11.54□□□□□ -0.56
TSPAN4-201ENST00000346501 OR1L4Q8NGR5 311 aa11.54□□□□□ -0.56
TSPAN4-201ENST00000346501 SAV1Q9H4B6 383 aaPredicted RBP11.54□□□□□ -0.56
TSPAN4-201ENST00000346501 UBE2L5PA0A1B0GUS4 154 aa11.53□□□□□ -0.56
TSPAN4-201ENST00000346501 NUPR2A6NF83 97 aa11.53□□□□□ -0.56
TSPAN4-201ENST00000346501 MPDU1O75352 247 aa11.53□□□□□ -0.56
TSPAN4-201ENST00000346501 PMS2P11Q13670 270 aa11.53□□□□□ -0.56
TSPAN4-201ENST00000346501 C10orf113Q5VZT2 155 aa11.53□□□□□ -0.56
TSPAN4-201ENST00000346501 LINC00305Q7Z4B0 112 aa11.53□□□□□ -0.56
TSPAN4-201ENST00000346501 BPIFA4PQ86YQ2 179 aa11.53□□□□□ -0.56
TSPAN4-201ENST00000346501 UHRF2Q96PU4 802 aa11.53□□□□□ -0.56
TSPAN4-201ENST00000346501 PFDN5Q99471 154 aa11.53□□□□□ -0.56
TSPAN4-201ENST00000346501 WDR83OSQ9Y284 106 aa11.53□□□□□ -0.56
TSPAN4-201ENST00000346501 IGSF23A1L1A6 192 aa11.52□□□□□ -0.57
TSPAN4-201ENST00000346501 SOCS3O14543 225 aa11.52□□□□□ -0.57
TSPAN4-201ENST00000346501 IGKV3-20P01619 116 aa11.52□□□□□ -0.57
TSPAN4-201ENST00000346501 MIFP14174 115 aa11.52□□□□□ -0.57
TSPAN4-201ENST00000346501 MGST2Q99735 147 aa11.52□□□□□ -0.57
TSPAN4-201ENST00000346501 C11orf68Q9H3H3 251 aaKnown RBP11.52□□□□□ -0.57
TSPAN4-201ENST00000346501 C11orf1Q9H5F2 150 aa11.52□□□□□ -0.57
TSPAN4-201ENST00000346501 DNAJC4Q9NNZ3 241 aa11.52□□□□□ -0.57
TSPAN4-201ENST00000346501 XCL2Q9UBD3 114 aa11.52□□□□□ -0.57
TSPAN4-201ENST00000346501 KLK5Q9Y337 293 aaPredicted RBP11.52□□□□□ -0.57
TSPAN4-201ENST00000346501 DUSP14O95147 198 aaKnown RBP11.51□□□□□ -0.57
TSPAN4-201ENST00000346501 PTTG1O95997 202 aa11.51□□□□□ -0.57
TSPAN4-201ENST00000346501 C4BPBP20851 252 aa11.51□□□□□ -0.57
TSPAN4-201ENST00000346501 FGF7P21781 194 aa11.51□□□□□ -0.57
TSPAN4-201ENST00000346501 VWC2Q2TAL6 325 aa11.51□□□□□ -0.57
TSPAN4-201ENST00000346501 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.51□□□□□ -0.57
TSPAN4-201ENST00000346501 ZNF709Q8N972 641 aa11.51□□□□□ -0.57
TSPAN4-201ENST00000346501 C11orf45Q8TAV5 145 aa11.51□□□□□ -0.57
TSPAN4-201ENST00000346501 CLUHP3Q96NS8 147 aa11.51□□□□□ -0.57
TSPAN4-201ENST00000346501 KCNIP2Q9NS61 270 aa11.51□□□□□ -0.57
TSPAN4-201ENST00000346501 AGRNO00468 2067 aa11.5□□□□□ -0.57
TSPAN4-201ENST00000346501 CXCL2P19875 107 aa11.5□□□□□ -0.57
TSPAN4-201ENST00000346501 RPL29P47914 159 aaKnown RBP11.5□□□□□ -0.57
TSPAN4-201ENST00000346501 B2MP61769 119 aa11.5□□□□□ -0.57
TSPAN4-201ENST00000346501 PSG9Q00887 426 aa11.5□□□□□ -0.57
TSPAN4-201ENST00000346501 LCN15Q6UWW0 184 aa11.5□□□□□ -0.57
TSPAN4-201ENST00000346501 ZNF738Q8NE65 137 aa11.5□□□□□ -0.57
TSPAN4-201ENST00000346501 PPP1R1CQ8WVI7 109 aa11.5□□□□□ -0.57
TSPAN4-201ENST00000346501 PPP1R14DQ9NXH3 145 aa11.5□□□□□ -0.57
TSPAN4-201ENST00000346501 CLEC5AQ9NY25 188 aa11.5□□□□□ -0.57
TSPAN4-201ENST00000346501 KMT2CQ8NEZ4 4911 aaKnown RBP11.5□□□□□ -0.57
TSPAN4-201ENST00000346501 A0A087X0K7 114 aa11.49□□□□□ -0.57
TSPAN4-201ENST00000346501 A0A0J9YX75 114 aa11.49□□□□□ -0.57
TSPAN4-201ENST00000346501 EWSR1Q01844 656 aaKnown RBP eCLIP11.49□□□□□ -0.572e-6■■■■□ 21.7
TSPAN4-201ENST00000346501 FAM78BQ5VT40 261 aa11.49□□□□□ -0.57
TSPAN4-201ENST00000346501 MIC13Q5XKP0 118 aa11.49□□□□□ -0.57
TSPAN4-201ENST00000346501 PATE2Q6UY27 113 aa11.49□□□□□ -0.57
TSPAN4-201ENST00000346501 OR5C1Q8NGR4 320 aa11.49□□□□□ -0.57
TSPAN4-201ENST00000346501 SLC50A1Q9BRV3 221 aa11.49□□□□□ -0.57
TSPAN4-201ENST00000346501 SLC39A9Q9NUM3 307 aa11.49□□□□□ -0.57
TSPAN4-201ENST00000346501 ZNF705EA8MWA4 302 aaPredicted RBP11.48□□□□□ -0.57
TSPAN4-201ENST00000346501 C17orf112F2Z3M2 114 aa11.48□□□□□ -0.57
TSPAN4-201ENST00000346501 AMBPP02760 352 aa11.48□□□□□ -0.57
TSPAN4-201ENST00000346501 GIG44P09565 113 aaPredicted RBP11.48□□□□□ -0.57
TSPAN4-201ENST00000346501 NHLH2Q02577 135 aa11.48□□□□□ -0.57
TSPAN4-201ENST00000346501 GDF5OSQ5U4N7 250 aa11.48□□□□□ -0.57
TSPAN4-201ENST00000346501 CHAC2Q8WUX2 184 aa11.48□□□□□ -0.57
TSPAN4-201ENST00000346501 OR5AC2Q9NZP5 309 aa11.48□□□□□ -0.57
TSPAN4-201ENST00000346501 GOLT1BQ9Y3E0 138 aa11.48□□□□□ -0.57
TSPAN4-201ENST00000346501 PXMP4Q9Y6I8 212 aa11.48□□□□□ -0.57
TSPAN4-201ENST00000346501 IGHV4-28A0A0C4DH34 117 aa11.47□□□□□ -0.57
TSPAN4-201ENST00000346501 LCE6AA0A183 80 aa11.47□□□□□ -0.57
TSPAN4-201ENST00000346501 H2BFSP57053 126 aa11.47□□□□□ -0.57
TSPAN4-201ENST00000346501 PRR20EP86478 221 aa11.47□□□□□ -0.57
TSPAN4-201ENST00000346501 PRR20CP86479 221 aa11.47□□□□□ -0.57
TSPAN4-201ENST00000346501 PRR20DP86480 221 aa11.47□□□□□ -0.57
TSPAN4-201ENST00000346501 PRR20BP86481 221 aa11.47□□□□□ -0.57
TSPAN4-201ENST00000346501 PRR20AP86496 221 aa11.47□□□□□ -0.57
TSPAN4-201ENST00000346501 CLINT1Q14677 625 aa11.47□□□□□ -0.57
TSPAN4-201ENST00000346501 OPCMLQ14982 345 aa11.47□□□□□ -0.57
TSPAN4-201ENST00000346501 GUK1Q16774 197 aa11.47□□□□□ -0.57
TSPAN4-201ENST00000346501 CEMP1Q6PRD7 247 aaPredicted RBP11.47□□□□□ -0.57
TSPAN4-201ENST00000346501 IGHV3OR16-12A0A075B7B8 117 aa11.46□□□□□ -0.57
TSPAN4-201ENST00000346501 SMIM9A6NGZ8 99 aa11.46□□□□□ -0.57
TSPAN4-201ENST00000346501 F6UB75 175 aa11.46□□□□□ -0.57
TSPAN4-201ENST00000346501 DEFB4AO15263 64 aa11.46□□□□□ -0.57
TSPAN4-201ENST00000346501 MPC2O95563 127 aa11.46□□□□□ -0.57
TSPAN4-201ENST00000346501 IFNA5P01569 189 aa11.46□□□□□ -0.57
TSPAN4-201ENST00000346501 FXYD7P58549 80 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms