RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 VDAC2P45880 294 aaPredicted RBP14.25□□□□□ -0.13
SPAST-202ENST00000345662 PHF3Q92576 2039 aaKnown RBP14.25□□□□□ -0.13
SPAST-202ENST00000345662 TIMM23O14925 209 aa14.25□□□□□ -0.13
SPAST-202ENST00000345662 IGHV3OR16-10A0A075B7F0 116 aa14.25□□□□□ -0.13
SPAST-202ENST00000345662 F8W1H4 67 aa14.25□□□□□ -0.13
SPAST-202ENST00000345662 MLNRO43193 412 aa14.25□□□□□ -0.13
SPAST-202ENST00000345662 IGHV1-46P01743 117 aa14.25□□□□□ -0.13
SPAST-202ENST00000345662 MLANAQ16655 118 aa14.25□□□□□ -0.13
SPAST-202ENST00000345662 HS3ST6Q96QI5 342 aa14.25□□□□□ -0.13
SPAST-202ENST00000345662 ABCA7Q8IZY2 2146 aa14.25□□□□□ -0.13
SPAST-202ENST00000345662 TNFRSF6BO95407 300 aa14.25□□□□□ -0.13
SPAST-202ENST00000345662 SMIM27A0A1W2PRY6 76 aa14.24□□□□□ -0.13
SPAST-202ENST00000345662 OVOL1O14753 267 aa14.24□□□□□ -0.13
SPAST-202ENST00000345662 ETDBQ3ZM63 59 aa14.24□□□□□ -0.13
SPAST-202ENST00000345662 FAM231DQ6ZW35 169 aa14.24□□□□□ -0.13
SPAST-202ENST00000345662 LINC01560Q8TB33 94 aa14.24□□□□□ -0.13
SPAST-202ENST00000345662 CD24P25063 80 aa14.24□□□□□ -0.13
SPAST-202ENST00000345662 BVES-AS1Q5T3Y7 98 aa14.24□□□□□ -0.13
SPAST-202ENST00000345662 IGHV1-24A0A0C4DH33 117 aa14.24□□□□□ -0.13
SPAST-202ENST00000345662 H0YJW9 148 aa14.24□□□□□ -0.13
SPAST-202ENST00000345662 PIMREGQ9BSJ6 248 aa14.24□□□□□ -0.13
SPAST-202ENST00000345662 IL18BPO95998 194 aa14.24□□□□□ -0.13
SPAST-202ENST00000345662 GGTLC3B5MD39 225 aa14.23□□□□□ -0.13
SPAST-202ENST00000345662 TRAV40A0A0B4J280 105 aa14.23□□□□□ -0.13
SPAST-202ENST00000345662 WIPF3A6NGB9 483 aa14.23□□□□□ -0.13
SPAST-202ENST00000345662 IGKV1-39P01597 117 aa14.23□□□□□ -0.13
SPAST-202ENST00000345662 IGKV1D-39P04432 117 aa14.23□□□□□ -0.13
SPAST-202ENST00000345662 PDLIM4P50479 330 aa14.23□□□□□ -0.13
SPAST-202ENST00000345662 C9orf172C9J069 976 aa14.23□□□□□ -0.13
SPAST-202ENST00000345662 Q8TAT8 98 aa14.23□□□□□ -0.13
SPAST-202ENST00000345662 C9JAW5 83 aa14.23□□□□□ -0.13
SPAST-202ENST00000345662 RPL15P61313 204 aaKnown RBP14.23□□□□□ -0.13
SPAST-202ENST00000345662 SPRR3Q9UBC9 169 aa14.23□□□□□ -0.13
SPAST-202ENST00000345662 KLF12Q9Y4X4 402 aa14.23□□□□□ -0.13
SPAST-202ENST00000345662 LTBP1Q14766 1721 aa14.23□□□□□ -0.13
SPAST-202ENST00000345662 C17orf82Q86X59 251 aaPredicted RBP14.22□□□□□ -0.13
SPAST-202ENST00000345662 ATP6V0BQ99437 205 aa14.22□□□□□ -0.13
SPAST-202ENST00000345662 NPFFR1Q9GZQ6 430 aa14.22□□□□□ -0.13
SPAST-202ENST00000345662 DPH3P1Q9H4G8 78 aa14.22□□□□□ -0.13
SPAST-202ENST00000345662 ZCCHC24Q8N2G6 241 aaKnown RBP14.22□□□□□ -0.13
SPAST-202ENST00000345662 IGHV3-11P01762 117 aa14.22□□□□□ -0.13
SPAST-202ENST00000345662 MYLKQ15746 1914 aa14.22□□□□□ -0.13
SPAST-202ENST00000345662 XIRP1Q702N8 1843 aaKnown RBP14.22□□□□□ -0.13
SPAST-202ENST00000345662 A0A1W2PPM0 123 aa14.22□□□□□ -0.13
SPAST-202ENST00000345662 MORN3Q6PF18 240 aaPredicted RBP14.22□□□□□ -0.13
SPAST-202ENST00000345662 NEU4Q8WWR8 484 aaPredicted RBP14.22□□□□□ -0.13
SPAST-202ENST00000345662 PRR19A6NJB7 356 aa14.21□□□□□ -0.13
SPAST-202ENST00000345662 HAPLN4Q86UW8 402 aa14.21□□□□□ -0.13
SPAST-202ENST00000345662 TMEM8BA6NDV4 472 aa14.21□□□□□ -0.13
SPAST-202ENST00000345662 C1orf122Q6ZSJ8 110 aa14.21□□□□□ -0.13
SPAST-202ENST00000345662 SPACA3Q8IXA5 215 aa14.21□□□□□ -0.13
SPAST-202ENST00000345662 C11orf52Q96A22 123 aa14.21□□□□□ -0.13
SPAST-202ENST00000345662 RCHY1Q96PM5 261 aa14.21□□□□□ -0.13
SPAST-202ENST00000345662 C11orf68Q9H3H3 251 aaKnown RBP14.21□□□□□ -0.13
SPAST-202ENST00000345662 GAGE12HA6NDE8 117 aa14.21□□□□□ -0.14
SPAST-202ENST00000345662 UNQ6494/PRO21346Q6UXR6 183 aa14.21□□□□□ -0.14
SPAST-202ENST00000345662 SIGLEC15Q6ZMC9 328 aa14.21□□□□□ -0.14
SPAST-202ENST00000345662 PYGO2Q9BRQ0 406 aa14.21□□□□□ -0.14
SPAST-202ENST00000345662 A0A0U1RRA0 63 aa14.2□□□□□ -0.14
SPAST-202ENST00000345662 CFHR2P36980 270 aa14.2□□□□□ -0.14
SPAST-202ENST00000345662 TMEM200BQ69YZ2 307 aa14.2□□□□□ -0.14
SPAST-202ENST00000345662 GVINP1Q7Z2Y8 2422 aa14.2□□□□□ -0.14
SPAST-202ENST00000345662 IGLC7A0M8Q6 106 aa14.2□□□□□ -0.14
SPAST-202ENST00000345662 LGALS9BQ3B8N2 356 aa14.2□□□□□ -0.14
SPAST-202ENST00000345662 LGALS9CQ6DKI2 356 aa14.2□□□□□ -0.14
SPAST-202ENST00000345662 FAM57AQ8TBR7 257 aa14.2□□□□□ -0.14
SPAST-202ENST00000345662 LINC01587Q99440 93 aa14.2□□□□□ -0.14
SPAST-202ENST00000345662 LCNL1Q6ZST4 164 aa14.2□□□□□ -0.14
SPAST-202ENST00000345662 FAM104BQ5XKR9 115 aa14.2□□□□□ -0.14
SPAST-202ENST00000345662 PPDPFLQ8WWR9 84 aa14.2□□□□□ -0.14
SPAST-202ENST00000345662 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.19□□□□□ -0.14
SPAST-202ENST00000345662 RNF5Q99942 180 aa14.19□□□□□ -0.14
SPAST-202ENST00000345662 TRBV20-1A0A075B6N2 111 aa14.19□□□□□ -0.14
SPAST-202ENST00000345662 VCYO14598 125 aa14.19□□□□□ -0.14
SPAST-202ENST00000345662 IGHV1-8P0DP01 117 aa14.19□□□□□ -0.14
SPAST-202ENST00000345662 CENPVQ7Z7K6 275 aaPredicted RBP14.19□□□□□ -0.14
SPAST-202ENST00000345662 IGKV1D-17A0A075B6S4 117 aa14.19□□□□□ -0.14
SPAST-202ENST00000345662 ZNF883P0CG24 379 aa14.19□□□□□ -0.14
SPAST-202ENST00000345662 CSRP1P21291 193 aaKnown RBP14.19□□□□□ -0.14
SPAST-202ENST00000345662 UCNP55089 124 aa14.19□□□□□ -0.14
SPAST-202ENST00000345662 CCL25O15444 150 aa14.19□□□□□ -0.14
SPAST-202ENST00000345662 GHRHP01286 108 aa14.18□□□□□ -0.14
SPAST-202ENST00000345662 TMEM14BQ9NUH8 114 aa14.18□□□□□ -0.14
SPAST-202ENST00000345662 IGHV1-3A0A0C4DH29 117 aa14.18□□□□□ -0.14
SPAST-202ENST00000345662 TMEM213A2RRL7 107 aa14.18□□□□□ -0.14
SPAST-202ENST00000345662 COLCA1Q6ZS62 124 aa14.18□□□□□ -0.14
SPAST-202ENST00000345662 DUSP14O95147 198 aaKnown RBP14.18□□□□□ -0.14
SPAST-202ENST00000345662 IGKV1-16P04430 117 aa14.18□□□□□ -0.14
SPAST-202ENST00000345662 PAX8Q06710 450 aa14.18□□□□□ -0.14
SPAST-202ENST00000345662 ZFP36L1Q07352 338 aaKnown RBP14.18□□□□□ -0.14
SPAST-202ENST00000345662 CSTL1Q9H114 145 aa14.18□□□□□ -0.14
SPAST-202ENST00000345662 CACNA1EQ15878 2313 aa14.18□□□□□ -0.14
SPAST-202ENST00000345662 AZU1P20160 251 aa14.18□□□□□ -0.14
SPAST-202ENST00000345662 B3GALT5-AS1P59052 145 aa14.18□□□□□ -0.14
SPAST-202ENST00000345662 NPC2P61916 151 aa14.18□□□□□ -0.14
SPAST-202ENST00000345662 PRSS57Q6UWY2 283 aa14.18□□□□□ -0.14
SPAST-202ENST00000345662 LGALS1P09382 135 aaKnown RBP14.17□□□□□ -0.14
SPAST-202ENST00000345662 SP9P0CG40 484 aa14.17□□□□□ -0.14
SPAST-202ENST00000345662 TMEM75Q8N9X5 138 aa14.17□□□□□ -0.14
SPAST-202ENST00000345662 TRGV11A0A075B6L2 103 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms