RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 ARPC5O15511 151 aa8.88□□□□□ -0.99
SNCA-202ENST00000345009 RPL7P18124 248 aaKnown RBP8.88□□□□□ -0.99
SNCA-202ENST00000345009 TFPI2P48307 235 aa8.88□□□□□ -0.99
SNCA-202ENST00000345009 OPCMLQ14982 345 aa8.88□□□□□ -0.99
SNCA-202ENST00000345009 MIC13Q5XKP0 118 aa8.88□□□□□ -0.99
SNCA-202ENST00000345009 WFDC3Q8IUB2 231 aa8.88□□□□□ -0.99
SNCA-202ENST00000345009 STXBP6Q8NFX7 210 aa8.88□□□□□ -0.99
SNCA-202ENST00000345009 GATAD1Q8WUU5 269 aa8.88□□□□□ -0.99
SNCA-202ENST00000345009 GLMPQ8WWB7 406 aa8.88□□□□□ -0.99
SNCA-202ENST00000345009 FAM110AQ9BQ89 295 aa8.88□□□□□ -0.99
SNCA-202ENST00000345009 SHANK2-AS3Q9BTD1 123 aa8.88□□□□□ -0.99
SNCA-202ENST00000345009 SLC25A39Q9BZJ4 359 aaPredicted RBP8.88□□□□□ -0.99
SNCA-202ENST00000345009 MFFQ9GZY8 342 aa8.88□□□□□ -0.99
SNCA-202ENST00000345009 ARV1Q9H2C2 271 aa8.88□□□□□ -0.99
SNCA-202ENST00000345009 MS4A6AQ9H2W1 248 aa8.88□□□□□ -0.99
SNCA-202ENST00000345009 SLC25A22Q9H936 323 aa8.88□□□□□ -0.99
SNCA-202ENST00000345009 PXMP4Q9Y6I8 212 aa8.88□□□□□ -0.99
SNCA-202ENST00000345009 hCG_2014768A0A024R1R8 64 aa8.87□□□□□ -0.99
SNCA-202ENST00000345009 HMSDA8MTL9 139 aa8.87□□□□□ -0.99
SNCA-202ENST00000345009 OR11H12B2RN74 326 aa8.87□□□□□ -0.99
SNCA-202ENST00000345009 K7EIL1 84 aa8.87□□□□□ -0.99
SNCA-202ENST00000345009 ID1P41134 155 aa8.87□□□□□ -0.99
SNCA-202ENST00000345009 MEOX2P50222 304 aa8.87□□□□□ -0.99
SNCA-202ENST00000345009 SNRPD3P62318 126 aaKnown RBP8.87□□□□□ -0.99
SNCA-202ENST00000345009 LINC00305Q7Z4B0 112 aa8.87□□□□□ -0.99
SNCA-202ENST00000345009 SEPSECSQ9HD40 501 aaKnown RBP8.87□□□□□ -0.99
SNCA-202ENST00000345009 NRN1Q9NPD7 142 aa8.87□□□□□ -0.99
SNCA-202ENST00000345009 A0A0D9SG52 128 aa8.86□□□□□ -0.99
SNCA-202ENST00000345009 JTBO76095 146 aa8.86□□□□□ -0.99
SNCA-202ENST00000345009 AKAP14Q86UN6 197 aa8.86□□□□□ -0.99
SNCA-202ENST00000345009 TCTE3Q8IZS6 198 aa8.86□□□□□ -0.99
SNCA-202ENST00000345009 Q8N1Y9 231 aa8.86□□□□□ -0.99
SNCA-202ENST00000345009 SMLR1H3BR10 107 aa8.85□□□□□ -0.99
SNCA-202ENST00000345009 H3BRN7 92 aa8.85□□□□□ -0.99
SNCA-202ENST00000345009 CD7P09564 240 aa8.85□□□□□ -0.99
SNCA-202ENST00000345009 ATF4P18848 351 aaPredicted RBP8.85□□□□□ -0.99
SNCA-202ENST00000345009 ZNF345Q14585 488 aa8.85□□□□□ -0.99
SNCA-202ENST00000345009 PATE2Q6UY27 113 aa8.85□□□□□ -0.99
SNCA-202ENST00000345009 BPIFA4PQ86YQ2 179 aa8.85□□□□□ -0.99
SNCA-202ENST00000345009 TMEM37Q8WXS4 190 aa8.85□□□□□ -0.99
SNCA-202ENST00000345009 GNPNAT1Q96EK6 184 aaPredicted RBP8.85□□□□□ -0.99
SNCA-202ENST00000345009 FAM210AQ96ND0 272 aa8.85□□□□□ -0.99
SNCA-202ENST00000345009 UHRF2Q96PU4 802 aa8.85□□□□□ -0.99
SNCA-202ENST00000345009 RSG1Q9BU20 258 aa8.85□□□□□ -0.99
SNCA-202ENST00000345009 WFDC1Q9HC57 220 aa8.85□□□□□ -0.99
SNCA-202ENST00000345009 TIMM9Q9Y5J7 89 aa8.85□□□□□ -0.99
SNCA-202ENST00000345009 RNF222A6NCQ9 220 aa8.84□□□□□ -0.99
SNCA-202ENST00000345009 A8MZ25 164 aa8.84□□□□□ -0.99
SNCA-202ENST00000345009 G3V3Q6 166 aa8.84□□□□□ -0.99
SNCA-202ENST00000345009 K7EQG2 157 aa8.84□□□□□ -0.99
SNCA-202ENST00000345009 MBP02144 154 aa8.84□□□□□ -0.99
SNCA-202ENST00000345009 IGHV4-30-4P0DP06 118 aa8.84□□□□□ -0.99
SNCA-202ENST00000345009 SERF2P84101 59 aa8.84□□□□□ -0.99
SNCA-202ENST00000345009 ACOT6Q3I5F7 207 aaPredicted RBP8.84□□□□□ -0.99
SNCA-202ENST00000345009 FFAR4Q5NUL3 377 aa8.84□□□□□ -0.99
SNCA-202ENST00000345009 LEMD1Q68G75 181 aa8.84□□□□□ -0.99
SNCA-202ENST00000345009 LRRC20Q8TCA0 184 aa8.84□□□□□ -0.99
SNCA-202ENST00000345009 ST6GAL2Q96JF0 529 aa8.84□□□□□ -0.99
SNCA-202ENST00000345009 SCRT1Q9BWW7 348 aa8.84□□□□□ -0.99
SNCA-202ENST00000345009 SLC25A32Q9H2D1 315 aa8.84□□□□□ -0.99
SNCA-202ENST00000345009 A0A1W2PPV4 95 aa8.83□□□□□ -1
SNCA-202ENST00000345009 KANTRA0A1W2PQU2 76 aa8.83□□□□□ -1
SNCA-202ENST00000345009 ISLRO14498 428 aa8.83□□□□□ -1
SNCA-202ENST00000345009 PFDN1O60925 122 aa8.83□□□□□ -1
SNCA-202ENST00000345009 C4BPBP20851 252 aa8.83□□□□□ -1
SNCA-202ENST00000345009 RHOBP62745 196 aa8.83□□□□□ -1
SNCA-202ENST00000345009 EIF5AP63241 154 aaKnown RBP8.83□□□□□ -1
SNCA-202ENST00000345009 FAM78BQ5VT40 261 aa8.83□□□□□ -1
SNCA-202ENST00000345009 KCNRGQ8N5I3 272 aa8.83□□□□□ -1
SNCA-202ENST00000345009 DEFB125Q8N687 156 aa8.83□□□□□ -1
SNCA-202ENST00000345009 HSD17B11Q8NBQ5 300 aa8.83□□□□□ -1
SNCA-202ENST00000345009 DCANP1Q8TF63 244 aa8.83□□□□□ -1
SNCA-202ENST00000345009 HYLS1Q96M11 299 aa8.83□□□□□ -1
SNCA-202ENST00000345009 ARPC5LQ9BPX5 153 aa8.83□□□□□ -1
SNCA-202ENST00000345009 PSMG3Q9BT73 122 aaPredicted RBP8.83□□□□□ -1
SNCA-202ENST00000345009 MRPL32Q9BYC8 188 aaKnown RBP8.83□□□□□ -1
SNCA-202ENST00000345009 SRD5A3Q9H8P0 318 aa8.83□□□□□ -1
SNCA-202ENST00000345009 M6PRP20645 277 aa8.82□□□□□ -1
SNCA-202ENST00000345009 PSMB3P49720 205 aa8.82□□□□□ -1
SNCA-202ENST00000345009 TAS2R45P59539 299 aa8.82□□□□□ -1
SNCA-202ENST00000345009 GUK1Q16774 197 aa8.82□□□□□ -1
SNCA-202ENST00000345009 C16orf92Q96LL3 132 aa8.82□□□□□ -1
SNCA-202ENST00000345009 UBQLN2Q9UHD9 624 aa8.82□□□□□ -1
SNCA-202ENST00000345009 DNAH3Q8TD57 4116 aa8.81□□□□□ -1
SNCA-202ENST00000345009 C1QBP02746 253 aa8.81□□□□□ -1
SNCA-202ENST00000345009 FRMD6-AS1P0C7T7 363 aa8.81□□□□□ -1
SNCA-202ENST00000345009 ZNF688P0C7X2 276 aa8.81□□□□□ -1
SNCA-202ENST00000345009 CXCL2P19875 107 aa8.81□□□□□ -1
SNCA-202ENST00000345009 DEFB131AP59861 70 aa8.81□□□□□ -1
SNCA-202ENST00000345009 ODF3L2Q3SX64 289 aa8.81□□□□□ -1
SNCA-202ENST00000345009 PSMG4Q5JS54 123 aa8.81□□□□□ -1
SNCA-202ENST00000345009 RPL7L1Q6DKI1 246 aaKnown RBP8.81□□□□□ -1
SNCA-202ENST00000345009 OR11H4Q8NGC9 324 aa8.81□□□□□ -1
SNCA-202ENST00000345009 OR2G3Q8NGZ4 309 aa8.81□□□□□ -1
SNCA-202ENST00000345009 LINC00052Q96N35 136 aa8.81□□□□□ -1
SNCA-202ENST00000345009 B9D2Q9BPU9 175 aa8.81□□□□□ -1
SNCA-202ENST00000345009 HRH4Q9H3N8 390 aa8.81□□□□□ -1
SNCA-202ENST00000345009 MAP6D1Q9H9H5 199 aa8.81□□□□□ -1
SNCA-202ENST00000345009 C19orf73Q9NVV2 129 aa8.81□□□□□ -1
SNCA-202ENST00000345009 CLEC5AQ9NY25 188 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms