RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 C1orf158Q8N1D5 194 aa12.22□□□□□ -0.45
BRCC3-202ENST00000340647 C2CD4CQ8TF44 421 aa12.22□□□□□ -0.45
BRCC3-202ENST00000340647 PPP1R14BQ96C90 147 aa12.22□□□□□ -0.45
BRCC3-202ENST00000340647 SHANK2-AS3Q9BTD1 123 aa12.22□□□□□ -0.45
BRCC3-202ENST00000340647 PFDN2Q9UHV9 154 aa12.22□□□□□ -0.45
BRCC3-202ENST00000340647 K7EPK0 472 aa12.21□□□□□ -0.45
BRCC3-202ENST00000340647 MRPS12O15235 138 aaKnown RBP12.21□□□□□ -0.45
BRCC3-202ENST00000340647 TSC22D2O75157 780 aa12.21□□□□□ -0.45
BRCC3-202ENST00000340647 SCGB1D2O95969 90 aa12.21□□□□□ -0.45
BRCC3-202ENST00000340647 ID1P41134 155 aa12.21□□□□□ -0.45
BRCC3-202ENST00000340647 TAS2R30P59541 319 aa12.21□□□□□ -0.45
BRCC3-202ENST00000340647 IL15RAQ13261 267 aa12.21□□□□□ -0.45
BRCC3-202ENST00000340647 UHRF2Q96PU4 802 aa12.21□□□□□ -0.45
BRCC3-202ENST00000340647 NEU1Q99519 415 aa12.21□□□□□ -0.45
BRCC3-202ENST00000340647 C1QTNF4Q9BXJ3 329 aa12.21□□□□□ -0.45
BRCC3-202ENST00000340647 GSKIPQ9P0R6 139 aa12.21□□□□□ -0.45
BRCC3-202ENST00000340647 SMCO3A2RU48 225 aa12.2□□□□□ -0.46
BRCC3-202ENST00000340647 FNDC10F2Z333 226 aa12.2□□□□□ -0.46
BRCC3-202ENST00000340647 IL5P05113 134 aa12.2□□□□□ -0.46
BRCC3-202ENST00000340647 NUTF2P61970 127 aaKnown RBP12.2□□□□□ -0.46
BRCC3-202ENST00000340647 SLC38A11Q08AI6 406 aa12.2□□□□□ -0.46
BRCC3-202ENST00000340647 CNPY1Q3B7I2 92 aa12.2□□□□□ -0.46
BRCC3-202ENST00000340647 RNF182Q8N6D2 247 aa12.2□□□□□ -0.46
BRCC3-202ENST00000340647 OR4B1Q8NGF8 309 aa12.2□□□□□ -0.46
BRCC3-202ENST00000340647 C16orf92Q96LL3 132 aa12.2□□□□□ -0.46
BRCC3-202ENST00000340647 TMEM147Q9BVK8 224 aa12.2□□□□□ -0.46
BRCC3-202ENST00000340647 NUDT15Q9NV35 164 aa12.2□□□□□ -0.46
BRCC3-202ENST00000340647 HECTD4Q9Y4D8 3996 aa12.2□□□□□ -0.46
BRCC3-202ENST00000340647 FAT2Q9NYQ8 4349 aa12.19□□□□□ -0.46
BRCC3-202ENST00000340647 IGLL5B9A064 214 aa12.19□□□□□ -0.46
BRCC3-202ENST00000340647 C11orf94C9JXX5 98 aa12.19□□□□□ -0.46
BRCC3-202ENST00000340647 LINC00869P0C866 280 aa12.19□□□□□ -0.46
BRCC3-202ENST00000340647 GALR1P47211 349 aa12.19□□□□□ -0.46
BRCC3-202ENST00000340647 ZNF431Q8TF32 576 aaPredicted RBP12.19□□□□□ -0.46
BRCC3-202ENST00000340647 NPVFQ9HCQ7 196 aa12.19□□□□□ -0.46
BRCC3-202ENST00000340647 CRXO43186 299 aaPredicted RBP12.18□□□□□ -0.46
BRCC3-202ENST00000340647 PRM2P04554 102 aa12.18□□□□□ -0.46
BRCC3-202ENST00000340647 PRB4P10163 310 aaPredicted RBP12.18□□□□□ -0.46
BRCC3-202ENST00000340647 MEOX2P50222 304 aa12.18□□□□□ -0.46
BRCC3-202ENST00000340647 PSG9Q00887 426 aa12.18□□□□□ -0.46
BRCC3-202ENST00000340647 MORN5Q5VZ52 161 aa12.18□□□□□ -0.46
BRCC3-202ENST00000340647 MGST2Q99735 147 aa12.18□□□□□ -0.46
BRCC3-202ENST00000340647 CCDC32Q9BV29 185 aa12.18□□□□□ -0.46
BRCC3-202ENST00000340647 PLA2G2EQ9NZK7 142 aa12.18□□□□□ -0.46
BRCC3-202ENST00000340647 HIGD1AQ9Y241 93 aa12.18□□□□□ -0.46
BRCC3-202ENST00000340647 DNAH17Q9UFH2 4485 aa12.18□□□□□ -0.46
BRCC3-202ENST00000340647 TRAV10A0A0B4J240 114 aa12.17□□□□□ -0.46
BRCC3-202ENST00000340647 HYPMO75409 117 aa12.17□□□□□ -0.46
BRCC3-202ENST00000340647 IFITM3Q01628 133 aa12.17□□□□□ -0.46
BRCC3-202ENST00000340647 SPATA31B1PQ5VZV4 182 aa12.17□□□□□ -0.46
BRCC3-202ENST00000340647 OR10P1Q8NGE3 313 aa12.17□□□□□ -0.46
BRCC3-202ENST00000340647 TMEM37Q8WXS4 190 aa12.17□□□□□ -0.46
BRCC3-202ENST00000340647 RPRMQ9NS64 109 aa12.17□□□□□ -0.46
BRCC3-202ENST00000340647 IGHV4-4A0A075B6R2 117 aa12.16□□□□□ -0.46
BRCC3-202ENST00000340647 A0A087X0K7 114 aa12.16□□□□□ -0.46
BRCC3-202ENST00000340647 AGPAT2O15120 278 aa12.16□□□□□ -0.46
BRCC3-202ENST00000340647 H2AFB2P0C5Z0 115 aa12.16□□□□□ -0.46
BRCC3-202ENST00000340647 CNN1P51911 297 aaKnown RBP12.16□□□□□ -0.46
BRCC3-202ENST00000340647 TCTAP57738 103 aa12.16□□□□□ -0.46
BRCC3-202ENST00000340647 SELENOTP62341 195 aa12.16□□□□□ -0.46
BRCC3-202ENST00000340647 EBLN2Q6P2I7 272 aa12.16□□□□□ -0.46
BRCC3-202ENST00000340647 TEPPQ6URK8 271 aa12.16□□□□□ -0.46
BRCC3-202ENST00000340647 LINC00299Q6ZSB3 139 aa12.16□□□□□ -0.46
BRCC3-202ENST00000340647 OR11H7Q8NGC8 314 aa12.16□□□□□ -0.46
BRCC3-202ENST00000340647 GPR82Q96P67 336 aa12.16□□□□□ -0.46
BRCC3-202ENST00000340647 ARL6Q9H0F7 186 aa12.16□□□□□ -0.46
BRCC3-202ENST00000340647 IGHV3OR16-12A0A075B7B8 117 aa12.15□□□□□ -0.46
BRCC3-202ENST00000340647 FAM24AA6NFZ4 105 aa12.15□□□□□ -0.46
BRCC3-202ENST00000340647 SMIM9A6NGZ8 99 aa12.15□□□□□ -0.46
BRCC3-202ENST00000340647 A6NHS1 94 aa12.15□□□□□ -0.46
BRCC3-202ENST00000340647 OR5G3P0C626 314 aa12.15□□□□□ -0.46
BRCC3-202ENST00000340647 CXCL3P19876 107 aa12.15□□□□□ -0.46
BRCC3-202ENST00000340647 SAMD13Q5VXD3 122 aa12.15□□□□□ -0.46
BRCC3-202ENST00000340647 C12orf45Q8N5I9 185 aaPredicted RBP12.15□□□□□ -0.46
BRCC3-202ENST00000340647 GGACTQ9BVM4 153 aa12.15□□□□□ -0.46
BRCC3-202ENST00000340647 ARV1Q9H2C2 271 aa12.15□□□□□ -0.46
BRCC3-202ENST00000340647 DKK2Q9UBU2 259 aa12.15□□□□□ -0.46
BRCC3-202ENST00000340647 LSM5Q9Y4Y9 91 aaKnown RBP12.15□□□□□ -0.46
BRCC3-202ENST00000340647 DEFB131BA0A096LNP1 70 aa12.14□□□□□ -0.47
BRCC3-202ENST00000340647 RAP2BP61225 183 aa12.14□□□□□ -0.47
BRCC3-202ENST00000340647 C2orf50Q96LR7 162 aa12.14□□□□□ -0.47
BRCC3-202ENST00000340647 RNF126Q9BV68 326 aa12.14□□□□□ -0.47
BRCC3-202ENST00000340647 KIAA1109Q2LD37 5005 aa12.14□□□□□ -0.47
BRCC3-202ENST00000340647 FAM25EA8MYX2 175 aa12.13□□□□□ -0.47
BRCC3-202ENST00000340647 M0R2Z0 102 aa12.13□□□□□ -0.47
BRCC3-202ENST00000340647 CST7O76096 145 aa12.13□□□□□ -0.47
BRCC3-202ENST00000340647 AMBPP02760 352 aa12.13□□□□□ -0.47
BRCC3-202ENST00000340647 SNRPCP09234 159 aaKnown RBP12.13□□□□□ -0.47
BRCC3-202ENST00000340647 RPL7P18124 248 aaKnown RBP12.13□□□□□ -0.47
BRCC3-202ENST00000340647 EMP1P54849 157 aa12.13□□□□□ -0.47
BRCC3-202ENST00000340647 FGL1Q08830 312 aa12.13□□□□□ -0.47
BRCC3-202ENST00000340647 ASAH1Q13510 395 aa12.13□□□□□ -0.47
BRCC3-202ENST00000340647 SPINK13Q1W4C9 94 aa12.13□□□□□ -0.47
BRCC3-202ENST00000340647 VWC2Q2TAL6 325 aa12.13□□□□□ -0.47
BRCC3-202ENST00000340647 IGF2BP2-AS1Q96M15 143 aa12.13□□□□□ -0.47
BRCC3-202ENST00000340647 MGAT4CQ9UBM8 478 aa12.13□□□□□ -0.47
BRCC3-202ENST00000340647 RFNGQ9Y644 331 aa12.13□□□□□ -0.47
BRCC3-202ENST00000340647 RYR1P21817 5038 aa12.12□□□□□ -0.47
BRCC3-202ENST00000340647 NACAE9PAV3 2078 aa12.12□□□□□ -0.47
BRCC3-202ENST00000340647 IGSF23A1L1A6 192 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms