RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 LOXP28300 417 aaPredicted RBP11.51□□□□□ -0.57
CPSF7-201ENST00000340437 MEF2CQ06413 473 aaPredicted RBP11.51□□□□□ -0.57
CPSF7-201ENST00000340437 HSBP1L1C9JCN9 74 aa11.51□□□□□ -0.57
CPSF7-201ENST00000340437 NUDT3O95989 172 aa11.51□□□□□ -0.57
CPSF7-201ENST00000340437 PNKDQ8N490 385 aa11.51□□□□□ -0.57
CPSF7-201ENST00000340437 RBM14Q96PK6 669 aaKnown RBP11.51□□□□□ -0.57
CPSF7-201ENST00000340437 IGLC7A0M8Q6 106 aa11.5□□□□□ -0.57
CPSF7-201ENST00000340437 IGHV3-23P01764 117 aa11.5□□□□□ -0.57
CPSF7-201ENST00000340437 IGHV1-8P0DP01 117 aa11.5□□□□□ -0.57
CPSF7-201ENST00000340437 PCP4P48539 62 aa11.5□□□□□ -0.57
CPSF7-201ENST00000340437 ETFRF1Q6IPR1 90 aa11.5□□□□□ -0.57
CPSF7-201ENST00000340437 C5orf17Q8NAS9 161 aa11.5□□□□□ -0.57
CPSF7-201ENST00000340437 ZC2HC1AQ96GY0 325 aa11.5□□□□□ -0.57
CPSF7-201ENST00000340437 RASL11BQ9BPW5 248 aa11.5□□□□□ -0.57
CPSF7-201ENST00000340437 MRPL27Q9P0M9 148 aaKnown RBP11.5□□□□□ -0.57
CPSF7-201ENST00000340437 ONECUT1Q9UBC0 465 aa11.5□□□□□ -0.57
CPSF7-201ENST00000340437 VSTM5A8MXK1 200 aa11.5□□□□□ -0.57
CPSF7-201ENST00000340437 ATP5IP56385 69 aaPredicted RBP11.5□□□□□ -0.57
CPSF7-201ENST00000340437 RPEQ96AT9 228 aa11.5□□□□□ -0.57
CPSF7-201ENST00000340437 TMUB1Q9BVT8 246 aa11.5□□□□□ -0.57
CPSF7-201ENST00000340437 M0R3E3 92 aa11.5□□□□□ -0.57
CPSF7-201ENST00000340437 CRYABP02511 175 aaKnown RBP11.5□□□□□ -0.57
CPSF7-201ENST00000340437 URB1-AS1Q96HZ7 61 aa11.5□□□□□ -0.57
CPSF7-201ENST00000340437 NCOR1P1Q9H4R4 102 aa11.5□□□□□ -0.57
CPSF7-201ENST00000340437 IGHV1-24A0A0C4DH33 117 aa11.49□□□□□ -0.57
CPSF7-201ENST00000340437 C2orf70A6NJV1 201 aa11.49□□□□□ -0.57
CPSF7-201ENST00000340437 STXBP6Q8NFX7 210 aa11.49□□□□□ -0.57
CPSF7-201ENST00000340437 OR4C5Q8NGB2 326 aa11.49□□□□□ -0.57
CPSF7-201ENST00000340437 LINC00614P0C842 121 aa11.49□□□□□ -0.57
CPSF7-201ENST00000340437 FAM231DQ6ZW35 169 aa11.49□□□□□ -0.57
CPSF7-201ENST00000340437 ZNF738Q8NE65 137 aa11.49□□□□□ -0.57
CPSF7-201ENST00000340437 FAM57AQ8TBR7 257 aa11.49□□□□□ -0.57
CPSF7-201ENST00000340437 ASH1LQ9NR48 2969 aaKnown RBP11.49□□□□□ -0.57
CPSF7-201ENST00000340437 FCGR2BP31994 310 aaPredicted RBP11.49□□□□□ -0.57
CPSF7-201ENST00000340437 RNASE6Q93091 150 aaKnown RBP11.49□□□□□ -0.57
CPSF7-201ENST00000340437 HIVEP3Q5T1R4 2406 aa11.49□□□□□ -0.57
CPSF7-201ENST00000340437 MC5RP33032 325 aa11.48□□□□□ -0.57
CPSF7-201ENST00000340437 PRSS3P2Q8NHM4 247 aa11.48□□□□□ -0.57
CPSF7-201ENST00000340437 TMEM133Q9H2Q1 129 aa11.48□□□□□ -0.57
CPSF7-201ENST00000340437 SORL1Q92673 2214 aa11.48□□□□□ -0.57
CPSF7-201ENST00000340437 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.48□□□□□ -0.57
CPSF7-201ENST00000340437 THBDP07204 575 aa11.48□□□□□ -0.57
CPSF7-201ENST00000340437 ARMS2P0C7Q2 107 aa11.48□□□□□ -0.57
CPSF7-201ENST00000340437 RBPMS2Q6ZRY4 209 aaKnown RBP11.48□□□□□ -0.57
CPSF7-201ENST00000340437 Q6ZS92 163 aa11.48□□□□□ -0.57
CPSF7-201ENST00000340437 WFDC3Q8IUB2 231 aa11.48□□□□□ -0.57
CPSF7-201ENST00000340437 OR8A1Q8NGG7 326 aa11.48□□□□□ -0.57
CPSF7-201ENST00000340437 CBY1Q9Y3M2 126 aa11.48□□□□□ -0.57
CPSF7-201ENST00000340437 LRRK2Q5S007 2527 aa11.48□□□□□ -0.57
CPSF7-201ENST00000340437 GAGE1Q13065 139 aa11.48□□□□□ -0.57
CPSF7-201ENST00000340437 IGFL4Q6B9Z1 124 aa11.48□□□□□ -0.57
CPSF7-201ENST00000340437 PPP1R27Q86WC6 154 aa11.48□□□□□ -0.57
CPSF7-201ENST00000340437 THAP8Q8NA92 274 aa11.47□□□□□ -0.57
CPSF7-201ENST00000340437 SLC25A39Q9BZJ4 359 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-201ENST00000340437 SIGLEC9Q9Y336 463 aa11.47□□□□□ -0.57
CPSF7-201ENST00000340437 A0A087X0K7 114 aa11.47□□□□□ -0.57
CPSF7-201ENST00000340437 IGHV1-69-2A0A0G2JMI3 117 aa11.47□□□□□ -0.57
CPSF7-201ENST00000340437 SYS1-DBNDD2H3BUS1 97 aa11.47□□□□□ -0.57
CPSF7-201ENST00000340437 APOHP02749 345 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-201ENST00000340437 PIP4P1Q86T03 277 aa11.47□□□□□ -0.57
CPSF7-201ENST00000340437 C8orf46Q8TAG6 207 aa11.47□□□□□ -0.57
CPSF7-201ENST00000340437 RNASE8Q8TDE3 154 aaKnown RBP11.47□□□□□ -0.57
CPSF7-201ENST00000340437 SCNM1Q9BWG6 230 aa11.47□□□□□ -0.57
CPSF7-201ENST00000340437 SVEP1Q4LDE5 3571 aa11.47□□□□□ -0.57
CPSF7-201ENST00000340437 IGHV2-26A0A0B4J1V2 119 aa11.47□□□□□ -0.57
CPSF7-201ENST00000340437 FSTL3O95633 263 aa11.47□□□□□ -0.57
CPSF7-201ENST00000340437 IL4P05112 153 aa11.47□□□□□ -0.57
CPSF7-201ENST00000340437 LGALS7P47929 136 aa11.47□□□□□ -0.57
CPSF7-201ENST00000340437 TEX45Q8NA69 505 aa11.47□□□□□ -0.57
CPSF7-201ENST00000340437 LINC00574Q9H8X3 128 aa11.47□□□□□ -0.57
CPSF7-201ENST00000340437 CEACAM8P31997 349 aaPredicted RBP11.46□□□□□ -0.57
CPSF7-201ENST00000340437 UQCRFS1P47985 274 aa11.46□□□□□ -0.57
CPSF7-201ENST00000340437 ARF6P62330 175 aa11.46□□□□□ -0.57
CPSF7-201ENST00000340437 BCL6BQ8N143 479 aaPredicted RBP11.46□□□□□ -0.57
CPSF7-201ENST00000340437 WIPF2Q8TF74 440 aaPredicted RBP11.46□□□□□ -0.57
CPSF7-201ENST00000340437 FMC1Q96HJ9 113 aa11.46□□□□□ -0.57
CPSF7-201ENST00000340437 MAP1LC3CQ9BXW4 147 aa11.46□□□□□ -0.57
CPSF7-201ENST00000340437 TOMM40O96008 361 aa11.46□□□□□ -0.57
CPSF7-201ENST00000340437 GP9P14770 177 aa11.46□□□□□ -0.57
CPSF7-201ENST00000340437 TMEM116Q8NCL8 245 aa11.46□□□□□ -0.57
CPSF7-201ENST00000340437 C2CD3Q4AC94 2353 aa11.46□□□□□ -0.58
CPSF7-201ENST00000340437 IGHV1-3A0A0C4DH29 117 aa11.45□□□□□ -0.58
CPSF7-201ENST00000340437 E7EQL1 145 aa11.45□□□□□ -0.58
CPSF7-201ENST00000340437 OR4A5Q8NH83 315 aa11.45□□□□□ -0.58
CPSF7-201ENST00000340437 TRGV9Q99603 122 aa11.45□□□□□ -0.58
CPSF7-201ENST00000340437 TMEM191AQ9H0A3 160 aa11.45□□□□□ -0.58
CPSF7-201ENST00000340437 C7orf69Q9H7B7 122 aa11.45□□□□□ -0.58
CPSF7-201ENST00000340437 FA2HQ7L5A8 372 aa11.45□□□□□ -0.58
CPSF7-201ENST00000340437 Q86TA4 180 aa11.45□□□□□ -0.58
CPSF7-201ENST00000340437 NUP37Q8NFH4 326 aa11.45□□□□□ -0.58
CPSF7-201ENST00000340437 COX11Q9Y6N1 276 aa11.45□□□□□ -0.58
CPSF7-201ENST00000340437 A0A1B0GXF2 115 aa11.45□□□□□ -0.58
CPSF7-201ENST00000340437 TMEM30BQ3MIR4 351 aa11.45□□□□□ -0.58
CPSF7-201ENST00000340437 TMEM155Q4W5P6 130 aa11.45□□□□□ -0.58
CPSF7-201ENST00000340437 SLC25A34Q6PIV7 304 aa11.45□□□□□ -0.58
CPSF7-201ENST00000340437 RASL11AQ6T310 242 aa11.45□□□□□ -0.58
CPSF7-201ENST00000340437 OR4F17Q8NGA8 305 aa11.45□□□□□ -0.58
CPSF7-201ENST00000340437 PPIAL4CA0A0B4J2A2 164 aa11.44□□□□□ -0.58
CPSF7-201ENST00000340437 PPIAL4GP0DN37 164 aa11.44□□□□□ -0.58
CPSF7-201ENST00000340437 MYCNOSP40205 109 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms