RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 FAM231CP0DMU5 169 aa13.93□□□□□ -0.18
ITGA4-202ENST00000339307 THAP8Q8NA92 274 aa13.93□□□□□ -0.18
ITGA4-202ENST00000339307 BPIFCQ8NFQ6 507 aa13.93□□□□□ -0.18
ITGA4-202ENST00000339307 SEC22CQ9BRL7 303 aa13.93□□□□□ -0.18
ITGA4-202ENST00000339307 SMCO3A2RU48 225 aa13.92□□□□□ -0.18
ITGA4-202ENST00000339307 CFDP00746 253 aaPredicted RBP13.92□□□□□ -0.18
ITGA4-202ENST00000339307 HTN3P15516 51 aa13.92□□□□□ -0.18
ITGA4-202ENST00000339307 GATA2P23769 480 aaPredicted RBP13.92□□□□□ -0.18
ITGA4-202ENST00000339307 SPATA31B1PQ5VZV4 182 aa13.92□□□□□ -0.18
ITGA4-202ENST00000339307 ZNF709Q8N972 641 aa13.92□□□□□ -0.18
ITGA4-202ENST00000339307 OR1B1Q8NGR6 318 aa13.92□□□□□ -0.18
ITGA4-202ENST00000339307 SLC25A32Q9H2D1 315 aa13.92□□□□□ -0.18
ITGA4-202ENST00000339307 M0R2N4 97 aa13.91□□□□□ -0.18
ITGA4-202ENST00000339307 MEOX2P50222 304 aa13.91□□□□□ -0.18
ITGA4-202ENST00000339307 FGL1Q08830 312 aa13.91□□□□□ -0.18
ITGA4-202ENST00000339307 FAM222AQ5U5X8 452 aa13.91□□□□□ -0.18
ITGA4-202ENST00000339307 SAMD13Q5VXD3 122 aa13.91□□□□□ -0.18
ITGA4-202ENST00000339307 POM121L12Q8N7R1 296 aa13.91□□□□□ -0.18
ITGA4-202ENST00000339307 TMEM208Q9BTX3 173 aa13.91□□□□□ -0.18
ITGA4-202ENST00000339307 TMEM147Q9BVK8 224 aa13.91□□□□□ -0.18
ITGA4-202ENST00000339307 PLA2G2EQ9NZK7 142 aa13.91□□□□□ -0.18
ITGA4-202ENST00000339307 STRAPQ9Y3F4 350 aaKnown RBP13.91□□□□□ -0.18
ITGA4-202ENST00000339307 ZNF98A6NK75 572 aa13.9□□□□□ -0.18
ITGA4-202ENST00000339307 ADAP1O75689 374 aa13.9□□□□□ -0.18
ITGA4-202ENST00000339307 HBE1P02100 147 aa13.9□□□□□ -0.18
ITGA4-202ENST00000339307 UBE2DNLQ8IWF7 75 aa13.9□□□□□ -0.18
ITGA4-202ENST00000339307 C20orf173Q96LM9 149 aa13.9□□□□□ -0.18
ITGA4-202ENST00000339307 NIPSNAP3BQ9BS92 247 aa13.9□□□□□ -0.18
ITGA4-202ENST00000339307 DOK5Q9P104 306 aa13.9□□□□□ -0.18
ITGA4-202ENST00000339307 A0A0J9YX75 114 aa13.9□□□□□ -0.19
ITGA4-202ENST00000339307 S100A7P31151 101 aa13.9□□□□□ -0.19
ITGA4-202ENST00000339307 DKK2Q9UBU2 259 aa13.9□□□□□ -0.19
ITGA4-202ENST00000339307 LOC102723971A0A1B0GUV8 181 aa13.89□□□□□ -0.19
ITGA4-202ENST00000339307 C7orf66A4D0T2 115 aa13.89□□□□□ -0.19
ITGA4-202ENST00000339307 PAX9P55771 341 aa13.89□□□□□ -0.19
ITGA4-202ENST00000339307 OXA1LQ15070 435 aa13.89□□□□□ -0.19
ITGA4-202ENST00000339307 RRN3P1Q2M238 152 aa13.89□□□□□ -0.19
ITGA4-202ENST00000339307 IGFL4Q6B9Z1 124 aa13.89□□□□□ -0.19
ITGA4-202ENST00000339307 TMEM182Q6ZP80 229 aaPredicted RBP13.89□□□□□ -0.19
ITGA4-202ENST00000339307 ACOT7LQ6ZUV0 252 aa13.89□□□□□ -0.19
ITGA4-202ENST00000339307 CLUHP3Q96NS8 147 aa13.89□□□□□ -0.19
ITGA4-202ENST00000339307 DNAH10Q8IVF4 4471 aa13.88□□□□□ -0.19
ITGA4-202ENST00000339307 TEX48A0A1B0GUV7 120 aa13.88□□□□□ -0.19
ITGA4-202ENST00000339307 PRSS46E5RG02 174 aa13.88□□□□□ -0.19
ITGA4-202ENST00000339307 IAH1Q2TAA2 248 aaPredicted RBP13.88□□□□□ -0.19
ITGA4-202ENST00000339307 C1orf158Q8N1D5 194 aa13.88□□□□□ -0.19
ITGA4-202ENST00000339307 PSENENQ9NZ42 101 aa13.88□□□□□ -0.19
ITGA4-202ENST00000339307 SLC45A2Q9UMX9 530 aa13.88□□□□□ -0.19
ITGA4-202ENST00000339307 YTHDF2Q9Y5A9 579 aaKnown RBP13.88□□□□□ -0.19
ITGA4-202ENST00000339307 POLR2GP62487 172 aaKnown RBP eCLIP13.87□□□□□ -0.19
ITGA4-202ENST00000339307 ID3Q02535 119 aa13.87□□□□□ -0.19
ITGA4-202ENST00000339307 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.87□□□□□ -0.19
ITGA4-202ENST00000339307 LINC00336Q6ZUF6 198 aa13.87□□□□□ -0.19
ITGA4-202ENST00000339307 OR4D5Q8NGN0 318 aa13.87□□□□□ -0.19
ITGA4-202ENST00000339307 GPR82Q96P67 336 aa13.87□□□□□ -0.19
ITGA4-202ENST00000339307 VPS13DQ5THJ4 4388 aa13.87□□□□□ -0.19
ITGA4-202ENST00000339307 SSSCA1O60232 199 aa13.86□□□□□ -0.19
ITGA4-202ENST00000339307 RAP2BP61225 183 aa13.86□□□□□ -0.19
ITGA4-202ENST00000339307 RNF182Q8N6D2 247 aa13.86□□□□□ -0.19
ITGA4-202ENST00000339307 ZBTB8BQ8NAP8 495 aaPredicted RBP13.86□□□□□ -0.19
ITGA4-202ENST00000339307 SCGB1D2O95969 90 aa13.85□□□□□ -0.19
ITGA4-202ENST00000339307 OR5G3P0C626 314 aa13.85□□□□□ -0.19
ITGA4-202ENST00000339307 DAD1P61803 113 aa13.85□□□□□ -0.19
ITGA4-202ENST00000339307 RRAS2P62070 204 aaPredicted RBP13.85□□□□□ -0.19
ITGA4-202ENST00000339307 CYP2G1PQ6ZSU1 146 aa13.85□□□□□ -0.19
ITGA4-202ENST00000339307 ZNF738Q8NE65 137 aa13.85□□□□□ -0.19
ITGA4-202ENST00000339307 C2orf50Q96LR7 162 aa13.85□□□□□ -0.19
ITGA4-202ENST00000339307 IGLV2-18A0A075B6J9 118 aa13.84□□□□□ -0.19
ITGA4-202ENST00000339307 C5orf51A6NDU8 294 aa13.84□□□□□ -0.19
ITGA4-202ENST00000339307 DUSP14O95147 198 aaKnown RBP13.84□□□□□ -0.19
ITGA4-202ENST00000339307 CNN1P51911 297 aaKnown RBP13.84□□□□□ -0.19
ITGA4-202ENST00000339307 CYCSP99999 105 aaKnown RBP13.84□□□□□ -0.19
ITGA4-202ENST00000339307 SPINK13Q1W4C9 94 aa13.84□□□□□ -0.19
ITGA4-202ENST00000339307 TMEM144Q7Z5S9 345 aa13.84□□□□□ -0.19
ITGA4-202ENST00000339307 LRRC20Q8TCA0 184 aa13.84□□□□□ -0.19
ITGA4-202ENST00000339307 IGF2BP2-AS1Q96M15 143 aa13.84□□□□□ -0.19
ITGA4-202ENST00000339307 SLC25A39Q9BZJ4 359 aaPredicted RBP13.84□□□□□ -0.19
ITGA4-202ENST00000339307 PPP1R14DQ9NXH3 145 aa13.84□□□□□ -0.19
ITGA4-202ENST00000339307 HIGD1AQ9Y241 93 aa13.84□□□□□ -0.19
ITGA4-202ENST00000339307 M0R2Z0 102 aa13.83□□□□□ -0.2
ITGA4-202ENST00000339307 SSNA1O43805 119 aa13.83□□□□□ -0.2
ITGA4-202ENST00000339307 HYPMO75409 117 aa13.83□□□□□ -0.2
ITGA4-202ENST00000339307 C17orf77Q96MU5 243 aa13.83□□□□□ -0.2
ITGA4-202ENST00000339307 KRTAP17-1Q9BYP8 105 aa13.83□□□□□ -0.2
ITGA4-202ENST00000339307 PRSS29PA6NIE9 313 aa13.82□□□□□ -0.2
ITGA4-202ENST00000339307 ZNF705GA8MUZ8 300 aaPredicted RBP13.82□□□□□ -0.2
ITGA4-202ENST00000339307 FAM25EA8MYX2 175 aa13.82□□□□□ -0.2
ITGA4-202ENST00000339307 INSP01308 110 aa13.82□□□□□ -0.2
ITGA4-202ENST00000339307 LINC00869P0C866 280 aa13.82□□□□□ -0.2
ITGA4-202ENST00000339307 FAM210BQ96KR6 192 aa13.82□□□□□ -0.2
ITGA4-202ENST00000339307 GSKIPQ9P0R6 139 aa13.82□□□□□ -0.2
ITGA4-202ENST00000339307 ALG5Q9Y673 324 aa13.82□□□□□ -0.2
ITGA4-202ENST00000339307 H3BRN7 92 aa13.81□□□□□ -0.2
ITGA4-202ENST00000339307 CCSO14618 274 aa13.81□□□□□ -0.2
ITGA4-202ENST00000339307 PRM2P04554 102 aa13.81□□□□□ -0.2
ITGA4-202ENST00000339307 RPL7P18124 248 aaKnown RBP13.81□□□□□ -0.2
ITGA4-202ENST00000339307 TAS2R30P59541 319 aa13.81□□□□□ -0.2
ITGA4-202ENST00000339307 RHOBP62745 196 aa13.81□□□□□ -0.2
ITGA4-202ENST00000339307 AMTNQ6UX39 209 aa13.81□□□□□ -0.2
ITGA4-202ENST00000339307 OR11H7Q8NGC8 314 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms