RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 FAM78BQ5VT40 261 aa11.09□□□□□ -0.63
LINC01116-202ENST00000339037 EBLN2Q6P2I7 272 aa11.09□□□□□ -0.63
LINC01116-202ENST00000339037 GSG1LQ6UXU4 331 aa11.09□□□□□ -0.63
LINC01116-202ENST00000339037 ZNF575Q86XF7 245 aa11.09□□□□□ -0.63
LINC01116-202ENST00000339037 DEDD2Q8WXF8 326 aa11.09□□□□□ -0.63
LINC01116-202ENST00000339037 SRRQ9GZT4 340 aa11.09□□□□□ -0.63
LINC01116-202ENST00000339037 PAIP2BQ9ULR5 123 aaKnown RBP11.09□□□□□ -0.63
LINC01116-202ENST00000339037 TMED3Q9Y3Q3 217 aa11.09□□□□□ -0.63
LINC01116-202ENST00000339037 LRP1BQ9NZR2 4599 aa11.09□□□□□ -0.63
LINC01116-202ENST00000339037 PRSS46E5RG02 174 aa11.08□□□□□ -0.64
LINC01116-202ENST00000339037 F6UB75 175 aa11.08□□□□□ -0.64
LINC01116-202ENST00000339037 PAX9P55771 341 aa11.08□□□□□ -0.64
LINC01116-202ENST00000339037 RAB11AP62491 216 aa11.08□□□□□ -0.64
LINC01116-202ENST00000339037 RRN3P1Q2M238 152 aa11.08□□□□□ -0.64
LINC01116-202ENST00000339037 C1orf134Q5TEV5 83 aa11.08□□□□□ -0.64
LINC01116-202ENST00000339037 SAMD13Q5VXD3 122 aa11.08□□□□□ -0.64
LINC01116-202ENST00000339037 TMEM88Q6PEY1 159 aa11.08□□□□□ -0.64
LINC01116-202ENST00000339037 OR8I2Q8N0Y5 310 aa11.08□□□□□ -0.64
LINC01116-202ENST00000339037 C1orf158Q8N1D5 194 aa11.08□□□□□ -0.64
LINC01116-202ENST00000339037 PPP1R14BQ96C90 147 aa11.08□□□□□ -0.64
LINC01116-202ENST00000339037 A0A0J9YX75 114 aa11.07□□□□□ -0.64
LINC01116-202ENST00000339037 SNRPGP15A8MWD9 76 aa11.07□□□□□ -0.64
LINC01116-202ENST00000339037 WRBO00258 174 aa11.07□□□□□ -0.64
LINC01116-202ENST00000339037 SYNGR2O43760 224 aa11.07□□□□□ -0.64
LINC01116-202ENST00000339037 MED6O75586 246 aa11.07□□□□□ -0.64
LINC01116-202ENST00000339037 DAD1P61803 113 aa11.07□□□□□ -0.64
LINC01116-202ENST00000339037 SPANXN2Q5MJ10 180 aa11.07□□□□□ -0.64
LINC01116-202ENST00000339037 GGNBP1Q5YKI7 109 aa11.07□□□□□ -0.64
LINC01116-202ENST00000339037 THAP8Q8NA92 274 aa11.07□□□□□ -0.64
LINC01116-202ENST00000339037 TRGV9Q99603 122 aa11.07□□□□□ -0.64
LINC01116-202ENST00000339037 H3BP45 60 aa11.06□□□□□ -0.64
LINC01116-202ENST00000339037 ZNF701M0R085 212 aaPredicted RBP11.06□□□□□ -0.64
LINC01116-202ENST00000339037 ADAP1O75689 374 aa11.06□□□□□ -0.64
LINC01116-202ENST00000339037 BAK1Q16611 211 aa11.06□□□□□ -0.64
LINC01116-202ENST00000339037 TMEM208Q9BTX3 173 aa11.06□□□□□ -0.64
LINC01116-202ENST00000339037 RPRMQ9NS64 109 aa11.06□□□□□ -0.64
LINC01116-202ENST00000339037 C9orf170A2RU37 121 aa11.05□□□□□ -0.64
LINC01116-202ENST00000339037 H3BS24 57 aa11.05□□□□□ -0.64
LINC01116-202ENST00000339037 MEOX2P50222 304 aa11.05□□□□□ -0.64
LINC01116-202ENST00000339037 FAM3BP58499 235 aaPredicted RBP11.05□□□□□ -0.64
LINC01116-202ENST00000339037 UBE2MP61081 183 aaKnown RBP11.05□□□□□ -0.64
LINC01116-202ENST00000339037 C15orf53Q8NAA6 179 aa11.05□□□□□ -0.64
LINC01116-202ENST00000339037 C16orf92Q96LL3 132 aa11.05□□□□□ -0.64
LINC01116-202ENST00000339037 CIB3Q96Q77 187 aaPredicted RBP11.05□□□□□ -0.64
LINC01116-202ENST00000339037 DOK5Q9P104 306 aa11.05□□□□□ -0.64
LINC01116-202ENST00000339037 FLVCR2Q9UPI3 526 aa11.05□□□□□ -0.64
LINC01116-202ENST00000339037 NACAE9PAV3 2078 aa11.04□□□□□ -0.64
LINC01116-202ENST00000339037 NDUFB6O95139 128 aa11.04□□□□□ -0.64
LINC01116-202ENST00000339037 SPANXN5Q5MJ07 72 aa11.04□□□□□ -0.64
LINC01116-202ENST00000339037 IGF2BP2-AS1Q96M15 143 aa11.04□□□□□ -0.64
LINC01116-202ENST00000339037 SDHCQ99643 169 aaPredicted RBP11.04□□□□□ -0.64
LINC01116-202ENST00000339037 KRTAP4-5Q9BYR2 181 aa11.04□□□□□ -0.64
LINC01116-202ENST00000339037 LINC00854A0A1B0GVQ3 168 aa11.03□□□□□ -0.64
LINC01116-202ENST00000339037 NAP1L6A6NFF2 107 aa11.03□□□□□ -0.64
LINC01116-202ENST00000339037 GATA2P23769 480 aaPredicted RBP11.03□□□□□ -0.64
LINC01116-202ENST00000339037 BTCP35070 178 aa11.03□□□□□ -0.64
LINC01116-202ENST00000339037 GALR1P47211 349 aa11.03□□□□□ -0.64
LINC01116-202ENST00000339037 INPP1P49441 399 aa11.03□□□□□ -0.64
LINC01116-202ENST00000339037 RPP30P78346 268 aaKnown RBP11.03□□□□□ -0.64
LINC01116-202ENST00000339037 TRIQKQ629K1 86 aa11.03□□□□□ -0.64
LINC01116-202ENST00000339037 TMEM182Q6ZP80 229 aaPredicted RBP11.03□□□□□ -0.64
LINC01116-202ENST00000339037 ACOT7LQ6ZUV0 252 aa11.03□□□□□ -0.64
LINC01116-202ENST00000339037 C20orf173Q96LM9 149 aa11.03□□□□□ -0.64
LINC01116-202ENST00000339037 ATG101Q9BSB4 218 aa11.03□□□□□ -0.64
LINC01116-202ENST00000339037 SLC25A32Q9H2D1 315 aa11.03□□□□□ -0.64
LINC01116-202ENST00000339037 SLC25A22Q9H936 323 aa11.03□□□□□ -0.64
LINC01116-202ENST00000339037 A8MTW9 85 aa11.02□□□□□ -0.65
LINC01116-202ENST00000339037 CFDP00746 253 aaPredicted RBP11.02□□□□□ -0.65
LINC01116-202ENST00000339037 POLR2GP62487 172 aaKnown RBP eCLIP11.02□□□□□ -0.65
LINC01116-202ENST00000339037 AKR1C1Q04828 323 aa11.02□□□□□ -0.65
LINC01116-202ENST00000339037 AMTNQ6UX39 209 aa11.02□□□□□ -0.65
LINC01116-202ENST00000339037 C17orf77Q96MU5 243 aa11.02□□□□□ -0.65
LINC01116-202ENST00000339037 STRAPQ9Y3F4 350 aaKnown RBP11.02□□□□□ -0.65
LINC01116-202ENST00000339037 LYRM9A8MSI8 78 aa11.01□□□□□ -0.65
LINC01116-202ENST00000339037 C16orf90A8MZG2 172 aa11.01□□□□□ -0.65
LINC01116-202ENST00000339037 INSP01308 110 aa11.01□□□□□ -0.65
LINC01116-202ENST00000339037 OR4E1P0C645 316 aa11.01□□□□□ -0.65
LINC01116-202ENST00000339037 OR4D5Q8NGN0 318 aa11.01□□□□□ -0.65
LINC01116-202ENST00000339037 RSG1Q9BU20 258 aa11.01□□□□□ -0.65
LINC01116-202ENST00000339037 SLC45A2Q9UMX9 530 aa11.01□□□□□ -0.65
LINC01116-202ENST00000339037 APOBP04114 4563 aaKnown RBP11.01□□□□□ -0.65
LINC01116-202ENST00000339037 ZNF98A6NK75 572 aa11□□□□□ -0.65
LINC01116-202ENST00000339037 PMS2P5A8MQ11 134 aa11□□□□□ -0.65
LINC01116-202ENST00000339037 M0R2Z0 102 aa11□□□□□ -0.65
LINC01116-202ENST00000339037 SSSCA1O60232 199 aa11□□□□□ -0.65
LINC01116-202ENST00000339037 CCNKO75909 580 aa11□□□□□ -0.65
LINC01116-202ENST00000339037 DEFB130BP0DP73 79 aa11□□□□□ -0.65
LINC01116-202ENST00000339037 DEFB130AP0DP74 79 aa11□□□□□ -0.65
LINC01116-202ENST00000339037 ORM2P19652 201 aa11□□□□□ -0.65
LINC01116-202ENST00000339037 ANXA7P20073 488 aaKnown RBP11□□□□□ -0.65
LINC01116-202ENST00000339037 CNN1P51911 297 aaKnown RBP11□□□□□ -0.65
LINC01116-202ENST00000339037 SPINK13Q1W4C9 94 aa11□□□□□ -0.65
LINC01116-202ENST00000339037 BPIFCQ8NFQ6 507 aa11□□□□□ -0.65
LINC01116-202ENST00000339037 DNAH5Q8TE73 4624 aa10.99□□□□□ -0.65
LINC01116-202ENST00000339037 NBDYA0A0U1RRE5 68 aa10.99□□□□□ -0.65
LINC01116-202ENST00000339037 ZNF705GA8MUZ8 300 aaPredicted RBP10.99□□□□□ -0.65
LINC01116-202ENST00000339037 CDK2AP2O75956 126 aa10.99□□□□□ -0.65
LINC01116-202ENST00000339037 DUSP14O95147 198 aaKnown RBP10.99□□□□□ -0.65
LINC01116-202ENST00000339037 PRM2P04554 102 aa10.99□□□□□ -0.65
LINC01116-202ENST00000339037 IL7P13232 177 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms