RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 CENPEQ02224 2701 aa12.63□□□□□ -0.39
HPS1-202ENST00000338546 IGLV1-40P01703 118 aa12.62□□□□□ -0.39
HPS1-202ENST00000338546 IGHV4-59P01825 116 aa12.62□□□□□ -0.39
HPS1-202ENST00000338546 SLC25A5P05141 298 aaKnown RBP12.62□□□□□ -0.39
HPS1-202ENST00000338546 FOXL1Q12952 345 aa12.62□□□□□ -0.39
HPS1-202ENST00000338546 FAM209BQ5JX69 171 aa12.62□□□□□ -0.39
HPS1-202ENST00000338546 TOMM20LQ6UXN7 152 aa12.62□□□□□ -0.39
HPS1-202ENST00000338546 ARL6IP6Q8N6S5 226 aa12.62□□□□□ -0.39
HPS1-202ENST00000338546 OR10G8Q8NGN5 311 aa12.62□□□□□ -0.39
HPS1-202ENST00000338546 FAM210BQ96KR6 192 aa12.62□□□□□ -0.39
HPS1-202ENST00000338546 MS4A10Q96PG2 267 aa12.62□□□□□ -0.39
HPS1-202ENST00000338546 ATG101Q9BSB4 218 aa12.62□□□□□ -0.39
HPS1-202ENST00000338546 VPREB3Q9UKI3 123 aa12.62□□□□□ -0.39
HPS1-202ENST00000338546 URGCP-MRPS24S4R325 110 aa12.62□□□□□ -0.39
HPS1-202ENST00000338546 CREBBPQ92793 2442 aa12.62□□□□□ -0.39
HPS1-202ENST00000338546 A0A0G2JLM5 398 aa12.61□□□□□ -0.39
HPS1-202ENST00000338546 GCGP01275 180 aa12.61□□□□□ -0.39
HPS1-202ENST00000338546 CFHR3Q02985 330 aa12.61□□□□□ -0.39
HPS1-202ENST00000338546 CLEC19AQ6UXS0 136 aa12.61□□□□□ -0.39
HPS1-202ENST00000338546 GPR82Q96P67 336 aa12.61□□□□□ -0.39
HPS1-202ENST00000338546 ZFAND3Q9H8U3 227 aa12.61□□□□□ -0.39
HPS1-202ENST00000338546 PGPEP1LA6NFU8 196 aa12.6□□□□□ -0.39
HPS1-202ENST00000338546 K7EN84 100 aa12.6□□□□□ -0.39
HPS1-202ENST00000338546 GGCTO75223 188 aaKnown RBP12.6□□□□□ -0.39
HPS1-202ENST00000338546 CXCL1P09341 107 aa12.6□□□□□ -0.39
HPS1-202ENST00000338546 FMC1Q96HJ9 113 aa12.6□□□□□ -0.39
HPS1-202ENST00000338546 ZNF414Q96IQ9 312 aa12.6□□□□□ -0.39
HPS1-202ENST00000338546 OSTCQ9NRP0 149 aa12.6□□□□□ -0.39
HPS1-202ENST00000338546 APCP25054 2843 aa12.6□□□□□ -0.39
HPS1-202ENST00000338546 TRAV9-1A0A075B6T8 112 aa12.6□□□□□ -0.39
HPS1-202ENST00000338546 TGIF2-C20orf24A0A0A6YYL0 155 aa12.6□□□□□ -0.39
HPS1-202ENST00000338546 TRBV6-1A0A0K0K1D8 114 aa12.6□□□□□ -0.39
HPS1-202ENST00000338546 ISLRO14498 428 aa12.6□□□□□ -0.39
HPS1-202ENST00000338546 ZNF253O75346 499 aa12.6□□□□□ -0.39
HPS1-202ENST00000338546 TCRAP04437 139 aa12.6□□□□□ -0.39
HPS1-202ENST00000338546 TPPP2P59282 170 aa12.6□□□□□ -0.39
HPS1-202ENST00000338546 PSG9Q00887 426 aa12.6□□□□□ -0.39
HPS1-202ENST00000338546 C1orf194Q5T5A4 169 aa12.6□□□□□ -0.39
HPS1-202ENST00000338546 CMTM2Q8TAZ6 248 aa12.6□□□□□ -0.39
HPS1-202ENST00000338546 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.59□□□□□ -0.39
HPS1-202ENST00000338546 IGLV2-8P01709 118 aa12.59□□□□□ -0.39
HPS1-202ENST00000338546 RPS10P46783 165 aaKnown RBP12.59□□□□□ -0.39
HPS1-202ENST00000338546 UBE2G1P62253 170 aa12.59□□□□□ -0.39
HPS1-202ENST00000338546 BAGE2Q86Y30 109 aa12.59□□□□□ -0.39
HPS1-202ENST00000338546 WFDC11Q8NEX6 87 aa12.59□□□□□ -0.39
HPS1-202ENST00000338546 BIN3Q9NQY0 253 aa12.59□□□□□ -0.39
HPS1-202ENST00000338546 AURKAIP1Q9NWT8 199 aaPredicted RBP12.59□□□□□ -0.39
HPS1-202ENST00000338546 LINC00527Q9UJ94 153 aa12.59□□□□□ -0.39
HPS1-202ENST00000338546 TENM4Q6N022 2769 aa12.59□□□□□ -0.39
HPS1-202ENST00000338546 SERTM2A0A1B0GWG4 89 aa12.58□□□□□ -0.4
HPS1-202ENST00000338546 TYMSP04818 313 aa12.58□□□□□ -0.4
HPS1-202ENST00000338546 SIGLEC15Q6ZMC9 328 aa12.58□□□□□ -0.4
HPS1-202ENST00000338546 FAM231DQ6ZW35 169 aa12.58□□□□□ -0.4
HPS1-202ENST00000338546 TMEM86BQ8N661 226 aa12.58□□□□□ -0.4
HPS1-202ENST00000338546 NOL4LQ96MY1 436 aaPredicted RBP12.58□□□□□ -0.4
HPS1-202ENST00000338546 PRSS22Q9GZN4 317 aa12.58□□□□□ -0.4
HPS1-202ENST00000338546 GNB4Q9HAV0 340 aa12.58□□□□□ -0.4
HPS1-202ENST00000338546 SVEP1Q4LDE5 3571 aa12.57□□□□□ -0.4
HPS1-202ENST00000338546 MEOX2P50222 304 aa12.57□□□□□ -0.4
HPS1-202ENST00000338546 ERVFC1-1P60608 527 aa12.57□□□□□ -0.4
HPS1-202ENST00000338546 OR8I2Q8N0Y5 310 aa12.57□□□□□ -0.4
HPS1-202ENST00000338546 METTL26Q96S19 204 aa12.57□□□□□ -0.4
HPS1-202ENST00000338546 SRD5A3Q9H8P0 318 aa12.57□□□□□ -0.4
HPS1-202ENST00000338546 HELZ2Q9BYK8 2649 aaKnown RBP12.57□□□□□ -0.4
HPS1-202ENST00000338546 A0A087X0K7 114 aa12.56□□□□□ -0.4
HPS1-202ENST00000338546 K7EQM0 130 aa12.56□□□□□ -0.4
HPS1-202ENST00000338546 BUB3O43684 328 aa12.56□□□□□ -0.4
HPS1-202ENST00000338546 IGHG4P01861 327 aa12.56□□□□□ -0.4
HPS1-202ENST00000338546 ARL3P36405 182 aa12.56□□□□□ -0.4
HPS1-202ENST00000338546 HIST2H2BCQ6DN03 193 aa12.56□□□□□ -0.4
HPS1-202ENST00000338546 Q6ZS46 218 aa12.56□□□□□ -0.4
HPS1-202ENST00000338546 NPFFR1Q9GZQ6 430 aa12.56□□□□□ -0.4
HPS1-202ENST00000338546 AAMDCQ9H7C9 122 aa12.56□□□□□ -0.4
HPS1-202ENST00000338546 IL36BQ9NZH7 164 aa12.56□□□□□ -0.4
HPS1-202ENST00000338546 U3KQE9 123 aa12.56□□□□□ -0.4
HPS1-202ENST00000338546 CLPSL1A2RUU4 121 aa12.56□□□□□ -0.4
HPS1-202ENST00000338546 FBLL1A6NHQ2 334 aaKnown RBP12.56□□□□□ -0.4
HPS1-202ENST00000338546 PPP5D1E7EU14 171 aa12.56□□□□□ -0.4
HPS1-202ENST00000338546 NDUFA4O00483 81 aa12.56□□□□□ -0.4
HPS1-202ENST00000338546 SNRPCP09234 159 aaKnown RBP12.56□□□□□ -0.4
HPS1-202ENST00000338546 PF4V1P10720 104 aa12.56□□□□□ -0.4
HPS1-202ENST00000338546 FAM3BP58499 235 aaPredicted RBP12.56□□□□□ -0.4
HPS1-202ENST00000338546 GNG5P63218 68 aa12.56□□□□□ -0.4
HPS1-202ENST00000338546 LINC00479Q96M42 142 aa12.56□□□□□ -0.4
HPS1-202ENST00000338546 LTAP01374 205 aa12.55□□□□□ -0.4
HPS1-202ENST00000338546 HNF1AP20823 631 aa12.55□□□□□ -0.4
HPS1-202ENST00000338546 TMEM75Q8N9X5 138 aa12.55□□□□□ -0.4
HPS1-202ENST00000338546 MLST8Q9BVC4 326 aa12.55□□□□□ -0.4
HPS1-202ENST00000338546 V9GYV3 84 aa12.55□□□□□ -0.4
HPS1-202ENST00000338546 MAP1AP78559 2803 aaPredicted RBP12.54□□□□□ -0.4
HPS1-202ENST00000338546 H3BTX0 84 aa12.54□□□□□ -0.4
HPS1-202ENST00000338546 PSMB8P28062 276 aa12.54□□□□□ -0.4
HPS1-202ENST00000338546 RPL19P84098 196 aaKnown RBP12.54□□□□□ -0.4
HPS1-202ENST00000338546 OR5I1Q13606 314 aa12.54□□□□□ -0.4
HPS1-202ENST00000338546 IBA57Q5T440 356 aaKnown RBP12.54□□□□□ -0.4
HPS1-202ENST00000338546 EXOC3-AS1Q8N2X6 119 aa12.54□□□□□ -0.4
HPS1-202ENST00000338546 TRAV34A0A0B4J273 112 aa12.53□□□□□ -0.4
HPS1-202ENST00000338546 A0A1W2PPQ1 181 aa12.53□□□□□ -0.4
HPS1-202ENST00000338546 HOXA3O43365 443 aaPredicted RBP12.53□□□□□ -0.4
HPS1-202ENST00000338546 MGST1P10620 155 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms