RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 RNF5Q99942 180 aa18.18■□□□□ 0.5
CLPTM1-201ENST00000337392 Q9H3A6 140 aa18.18■□□□□ 0.5
CLPTM1-201ENST00000337392 CDC42EP3Q9UKI2 254 aa18.17■□□□□ 0.5
CLPTM1-201ENST00000337392 OR2T8A6NH00 312 aa18.17■□□□□ 0.5
CLPTM1-201ENST00000337392 SNURFLB1AK76 121 aa18.17■□□□□ 0.5
CLPTM1-201ENST00000337392 F8W735 103 aaPredicted RBP18.17■□□□□ 0.5
CLPTM1-201ENST00000337392 NDUFB8O95169 186 aa18.17■□□□□ 0.5
CLPTM1-201ENST00000337392 EGR2P11161 476 aaPredicted RBP18.17■□□□□ 0.5
CLPTM1-201ENST00000337392 ECSCRQ19T08 205 aa18.17■□□□□ 0.5
CLPTM1-201ENST00000337392 LINC00527Q9UJ94 153 aa18.17■□□□□ 0.5
CLPTM1-201ENST00000337392 EPDR1Q9UM22 224 aa18.17■□□□□ 0.5
CLPTM1-201ENST00000337392 IGHV7-81A0A0B4J1V7 117 aa18.16■□□□□ 0.5
CLPTM1-201ENST00000337392 MRPL18Q9H0U6 180 aaKnown RBP18.16■□□□□ 0.5
CLPTM1-201ENST00000337392 Q8N6K4 173 aa18.16■□□□□ 0.5
CLPTM1-201ENST00000337392 IGHV4-61A0A0C4DH41 118 aa18.15■□□□□ 0.5
CLPTM1-201ENST00000337392 ZNF562Q6V9R5 426 aa18.15■□□□□ 0.5
CLPTM1-201ENST00000337392 ZNF491Q8N8L2 437 aa18.15■□□□□ 0.5
CLPTM1-201ENST00000337392 Q8N9W7 124 aa18.15■□□□□ 0.5
CLPTM1-201ENST00000337392 FCGR2BP31994 310 aaPredicted RBP18.15■□□□□ 0.5
CLPTM1-201ENST00000337392 G3V318 75 aa18.14■□□□□ 0.49
CLPTM1-201ENST00000337392 GNG7O60262 68 aa18.14■□□□□ 0.49
CLPTM1-201ENST00000337392 Q56UQ5 140 aa18.14■□□□□ 0.49
CLPTM1-201ENST00000337392 TP53TG3Q9ULZ0 132 aa18.14■□□□□ 0.49
CLPTM1-201ENST00000337392 LY96Q9Y6Y9 160 aa18.14■□□□□ 0.49
CLPTM1-201ENST00000337392 IGLV11-55A0A075B6I3 123 aa18.14■□□□□ 0.49
CLPTM1-201ENST00000337392 OVOL3O00110 214 aa18.14■□□□□ 0.49
CLPTM1-201ENST00000337392 UBE2G1P62253 170 aa18.14■□□□□ 0.49
CLPTM1-201ENST00000337392 NUDT10Q8NFP7 164 aa18.14■□□□□ 0.49
CLPTM1-201ENST00000337392 NUDT11Q96G61 164 aa18.14■□□□□ 0.49
CLPTM1-201ENST00000337392 TMUB1Q9BVT8 246 aa18.14■□□□□ 0.49
CLPTM1-201ENST00000337392 TLN2Q9Y4G6 2542 aa18.13■□□□□ 0.49
CLPTM1-201ENST00000337392 RNF125Q96EQ8 232 aa18.13■□□□□ 0.49
CLPTM1-201ENST00000337392 BTF3L4Q96K17 158 aa18.13■□□□□ 0.49
CLPTM1-201ENST00000337392 MRPL27Q9P0M9 148 aaKnown RBP18.13■□□□□ 0.49
CLPTM1-201ENST00000337392 M0R3E3 92 aa18.12■□□□□ 0.49
CLPTM1-201ENST00000337392 CCDC144NLQ6NUI1 221 aa18.12■□□□□ 0.49
CLPTM1-201ENST00000337392 C1orf122Q6ZSJ8 110 aa18.12■□□□□ 0.49
CLPTM1-201ENST00000337392 CHRDL1Q9BU40 450 aa18.12■□□□□ 0.49
CLPTM1-201ENST00000337392 OSTCQ9NRP0 149 aa18.12■□□□□ 0.49
CLPTM1-201ENST00000337392 CENPVL3A0A0U1RRI6 287 aa18.11■□□□□ 0.49
CLPTM1-201ENST00000337392 PLP1P60201 277 aa18.11■□□□□ 0.49
CLPTM1-201ENST00000337392 IGFL4Q6B9Z1 124 aa18.11■□□□□ 0.49
CLPTM1-201ENST00000337392 GOLT1AQ6ZVE7 132 aa18.11■□□□□ 0.49
CLPTM1-201ENST00000337392 UBR5O95071 2799 aaPredicted RBP18.11■□□□□ 0.49
CLPTM1-201ENST00000337392 VWC2LB2RUY7 222 aa18.11■□□□□ 0.49
CLPTM1-201ENST00000337392 ATP6V0E1O15342 81 aa18.11■□□□□ 0.49
CLPTM1-201ENST00000337392 LINC00310P59036 64 aa18.11■□□□□ 0.49
CLPTM1-201ENST00000337392 CIARTQ8N365 385 aaPredicted RBP18.11■□□□□ 0.49
CLPTM1-201ENST00000337392 NAT8BQ9UHF3 227 aa18.11■□□□□ 0.49
CLPTM1-201ENST00000337392 DOPEY2Q9Y3R5 2298 aa18.1■□□□□ 0.49
CLPTM1-201ENST00000337392 UBE2E1P51965 193 aa18.1■□□□□ 0.49
CLPTM1-201ENST00000337392 RBX1P62877 108 aa18.1■□□□□ 0.49
CLPTM1-201ENST00000337392 MS4A10Q96PG2 267 aa18.1■□□□□ 0.49
CLPTM1-201ENST00000337392 CCL19Q99731 98 aa18.1■□□□□ 0.49
CLPTM1-201ENST00000337392 TCRAP04437 139 aa18.1■□□□□ 0.49
CLPTM1-201ENST00000337392 RPLP1P05386 114 aaKnown RBP18.1■□□□□ 0.49
CLPTM1-201ENST00000337392 YPEL3P61236 119 aaPredicted RBP18.1■□□□□ 0.49
CLPTM1-201ENST00000337392 TEX15Q9BXT5 2789 aa18.1■□□□□ 0.49
CLPTM1-201ENST00000337392 BBC3Q96PG8 261 aaPredicted RBP18.09■□□□□ 0.49
CLPTM1-201ENST00000337392 IGHV3OR16-13A0A075B7E8 117 aa18.09■□□□□ 0.49
CLPTM1-201ENST00000337392 IGHV3-74A0A0B4J1X5 117 aa18.09■□□□□ 0.49
CLPTM1-201ENST00000337392 MINOS1Q5TGZ0 78 aa18.09■□□□□ 0.49
CLPTM1-201ENST00000337392 TCF24Q7RTU0 167 aa18.09■□□□□ 0.49
CLPTM1-201ENST00000337392 SSBP4Q9BWG4 385 aaPredicted RBP18.09■□□□□ 0.49
CLPTM1-201ENST00000337392 C7orf69Q9H7B7 122 aa18.09■□□□□ 0.49
CLPTM1-201ENST00000337392 MINOS1-NBL1R4GNA1 71 aa18.09■□□□□ 0.49
CLPTM1-201ENST00000337392 IGHV4-30-2A0A087WSY4 118 aa18.08■□□□□ 0.49
CLPTM1-201ENST00000337392 TRAV40A0A0B4J280 105 aa18.08■□□□□ 0.49
CLPTM1-201ENST00000337392 PDLIM4P50479 330 aa18.08■□□□□ 0.49
CLPTM1-201ENST00000337392 STXBP6Q8NFX7 210 aa18.08■□□□□ 0.49
CLPTM1-201ENST00000337392 C21orf62Q9NYP8 219 aa18.08■□□□□ 0.49
CLPTM1-201ENST00000337392 TMEM183BQ1AE95 376 aa18.08■□□□□ 0.48
CLPTM1-201ENST00000337392 COA6Q5JTJ3 125 aaKnown RBP18.08■□□□□ 0.48
CLPTM1-201ENST00000337392 PRNTQ86SH4 94 aa18.08■□□□□ 0.48
CLPTM1-201ENST00000337392 NPFFO15130 113 aa18.07■□□□□ 0.48
CLPTM1-201ENST00000337392 FAM106CPP0CH98 169 aa18.07■□□□□ 0.48
CLPTM1-201ENST00000337392 FBXL7Q9UJT9 491 aa18.07■□□□□ 0.48
CLPTM1-201ENST00000337392 NAV2Q8IVL1 2488 aa18.07■□□□□ 0.48
CLPTM1-201ENST00000337392 IGHV3-66A0A0C4DH42 116 aa18.07■□□□□ 0.48
CLPTM1-201ENST00000337392 AMY1AP04745 511 aa18.07■□□□□ 0.48
CLPTM1-201ENST00000337392 GDF5OSQ5U4N7 250 aa18.07■□□□□ 0.48
CLPTM1-201ENST00000337392 UNQ5815/PRO19632Q6UWF5 114 aa18.07■□□□□ 0.48
CLPTM1-201ENST00000337392 SHANK2-AS3Q9BTD1 123 aa18.07■□□□□ 0.48
CLPTM1-201ENST00000337392 SMIM27A0A1W2PRY6 76 aa18.06■□□□□ 0.48
CLPTM1-201ENST00000337392 IGHV4-38-2P0DP08 117 aa18.06■□□□□ 0.48
CLPTM1-201ENST00000337392 CAMPP49913 170 aa18.06■□□□□ 0.48
CLPTM1-201ENST00000337392 EBI3Q14213 229 aa18.06■□□□□ 0.48
CLPTM1-201ENST00000337392 TMEM136Q6ZRR5 245 aa18.06■□□□□ 0.48
CLPTM1-201ENST00000337392 GBGT1Q8N5D6 347 aa18.06■□□□□ 0.48
CLPTM1-201ENST00000337392 TTC9CQ8N5M4 171 aa18.06■□□□□ 0.48
CLPTM1-201ENST00000337392 C5orf17Q8NAS9 161 aa18.06■□□□□ 0.48
CLPTM1-201ENST00000337392 NUP35Q8NFH5 326 aa18.06■□□□□ 0.48
CLPTM1-201ENST00000337392 RNASE8Q8TDE3 154 aaKnown RBP18.06■□□□□ 0.48
CLPTM1-201ENST00000337392 NPIPB5A8MRT5 1133 aa18.06■□□□□ 0.48
CLPTM1-201ENST00000337392 H3BRN7 92 aa18.06■□□□□ 0.48
CLPTM1-201ENST00000337392 SERF1AO75920 110 aa18.06■□□□□ 0.48
CLPTM1-201ENST00000337392 GPR183P32249 361 aa18.06■□□□□ 0.48
CLPTM1-201ENST00000337392 TCF21O43680 179 aa18.05■□□□□ 0.48
CLPTM1-201ENST00000337392 TOMM40O96008 361 aa18.05■□□□□ 0.48
CLPTM1-201ENST00000337392 MFAP4P55083 255 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms