RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 SLC25A32Q9H2D1 315 aa10.58□□□□□ -0.72
APOBEC3B-202ENST00000335760 MGAM2Q2M2H8 2515 aa10.57□□□□□ -0.72
APOBEC3B-202ENST00000335760 NKX2-5P52952 324 aaPredicted RBP10.57□□□□□ -0.72
APOBEC3B-202ENST00000335760 PAFAH1B2P68402 229 aa10.57□□□□□ -0.72
APOBEC3B-202ENST00000335760 ACOT6Q3I5F7 207 aaPredicted RBP10.57□□□□□ -0.72
APOBEC3B-202ENST00000335760 FAM78BQ5VT40 261 aa10.57□□□□□ -0.72
APOBEC3B-202ENST00000335760 WFDC3Q8IUB2 231 aa10.57□□□□□ -0.72
APOBEC3B-202ENST00000335760 OR2G3Q8NGZ4 309 aa10.57□□□□□ -0.72
APOBEC3B-202ENST00000335760 PRR25Q96S07 402 aa10.57□□□□□ -0.72
APOBEC3B-202ENST00000335760 SPAG8Q99932 426 aaPredicted RBP10.57□□□□□ -0.72
APOBEC3B-202ENST00000335760 MS4A6AQ9H2W1 248 aa10.57□□□□□ -0.72
APOBEC3B-202ENST00000335760 RNF24Q9Y225 148 aa10.57□□□□□ -0.72
APOBEC3B-202ENST00000335760 TRAV5A0A0B4J249 113 aa10.56□□□□□ -0.72
APOBEC3B-202ENST00000335760 DNASE2O00115 360 aaPredicted RBP10.56□□□□□ -0.72
APOBEC3B-202ENST00000335760 PRB2P02812 416 aaPredicted RBP10.56□□□□□ -0.72
APOBEC3B-202ENST00000335760 M6PRP20645 277 aa10.56□□□□□ -0.72
APOBEC3B-202ENST00000335760 SPATA31B1PQ5VZV4 182 aa10.56□□□□□ -0.72
APOBEC3B-202ENST00000335760 STXBP6Q8NFX7 210 aa10.56□□□□□ -0.72
APOBEC3B-202ENST00000335760 GPR82Q96P67 336 aa10.56□□□□□ -0.72
APOBEC3B-202ENST00000335760 DNAH3Q8TD57 4116 aa10.56□□□□□ -0.72
APOBEC3B-202ENST00000335760 OR4C46A6NHA9 309 aa10.55□□□□□ -0.72
APOBEC3B-202ENST00000335760 RPL7P18124 248 aaKnown RBP10.55□□□□□ -0.72
APOBEC3B-202ENST00000335760 GALR1P47211 349 aa10.55□□□□□ -0.72
APOBEC3B-202ENST00000335760 RAB2AP61019 212 aa10.55□□□□□ -0.72
APOBEC3B-202ENST00000335760 EIF5AP63241 154 aaKnown RBP10.55□□□□□ -0.72
APOBEC3B-202ENST00000335760 SERF2P84101 59 aa10.55□□□□□ -0.72
APOBEC3B-202ENST00000335760 MIR17HGQ75NE6 70 aa10.55□□□□□ -0.72
APOBEC3B-202ENST00000335760 SEPSECSQ9HD40 501 aaKnown RBP10.55□□□□□ -0.72
APOBEC3B-202ENST00000335760 FUT9Q9Y231 359 aa10.55□□□□□ -0.72
APOBEC3B-202ENST00000335760 SMAD5-AS1Q9Y6J3 95 aa10.55□□□□□ -0.72
APOBEC3B-202ENST00000335760 MBP02144 154 aa10.54□□□□□ -0.72
APOBEC3B-202ENST00000335760 SPP1P10451 314 aa10.54□□□□□ -0.72
APOBEC3B-202ENST00000335760 RHOBP62745 196 aa10.54□□□□□ -0.72
APOBEC3B-202ENST00000335760 GTSCR1Q86UQ5 136 aa10.54□□□□□ -0.72
APOBEC3B-202ENST00000335760 OR10G4Q8NGN3 311 aa10.54□□□□□ -0.72
APOBEC3B-202ENST00000335760 OR10G9Q8NGN4 311 aa10.54□□□□□ -0.72
APOBEC3B-202ENST00000335760 OR10G7Q8NGN6 311 aa10.54□□□□□ -0.72
APOBEC3B-202ENST00000335760 MRPL32Q9BYC8 188 aaKnown RBP10.54□□□□□ -0.72
APOBEC3B-202ENST00000335760 NRN1Q9NPD7 142 aa10.54□□□□□ -0.72
APOBEC3B-202ENST00000335760 AURKAIP1Q9NWT8 199 aaPredicted RBP10.54□□□□□ -0.72
APOBEC3B-202ENST00000335760 TRAV2A0A0B4J234 112 aa10.53□□□□□ -0.72
APOBEC3B-202ENST00000335760 A0A1W2PPV4 95 aa10.53□□□□□ -0.72
APOBEC3B-202ENST00000335760 CD7P09564 240 aa10.53□□□□□ -0.72
APOBEC3B-202ENST00000335760 TPT1P13693 172 aaKnown RBP10.53□□□□□ -0.72
APOBEC3B-202ENST00000335760 ATF4P18848 351 aaPredicted RBP10.53□□□□□ -0.72
APOBEC3B-202ENST00000335760 C4BPBP20851 252 aa10.53□□□□□ -0.72
APOBEC3B-202ENST00000335760 CD81P60033 236 aa10.53□□□□□ -0.72
APOBEC3B-202ENST00000335760 TMEM41BQ5BJD5 291 aa10.53□□□□□ -0.72
APOBEC3B-202ENST00000335760 FAM122CQ6P4D5 195 aa10.53□□□□□ -0.72
APOBEC3B-202ENST00000335760 BPIFA4PQ86YQ2 179 aa10.53□□□□□ -0.72
APOBEC3B-202ENST00000335760 BAP18Q8IXM2 172 aa10.53□□□□□ -0.72
APOBEC3B-202ENST00000335760 STOML3Q8TAV4 291 aa10.53□□□□□ -0.72
APOBEC3B-202ENST00000335760 SLC25A2Q9BXI2 301 aa10.53□□□□□ -0.72
APOBEC3B-202ENST00000335760 FBN3Q75N90 2809 aa10.53□□□□□ -0.72
APOBEC3B-202ENST00000335760 K7EQG2 157 aa10.52□□□□□ -0.72
APOBEC3B-202ENST00000335760 MRPS12O15235 138 aaKnown RBP10.52□□□□□ -0.72
APOBEC3B-202ENST00000335760 EIF3GO75821 320 aaKnown RBP eCLIP10.52□□□□□ -0.72
APOBEC3B-202ENST00000335760 AKR1C8PQ5T2L2 129 aa10.52□□□□□ -0.72
APOBEC3B-202ENST00000335760 SLC51BQ86UW2 128 aa10.52□□□□□ -0.72
APOBEC3B-202ENST00000335760 SORL1Q92673 2214 aa10.52□□□□□ -0.73
APOBEC3B-202ENST00000335760 BOLA2-SMG1P6H3BVE0 249 aa10.52□□□□□ -0.73
APOBEC3B-202ENST00000335760 SNRPCP09234 159 aaKnown RBP10.52□□□□□ -0.73
APOBEC3B-202ENST00000335760 SEC11BP0C7V7 166 aa10.52□□□□□ -0.73
APOBEC3B-202ENST00000335760 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.52□□□□□ -0.73
APOBEC3B-202ENST00000335760 Q8N1Y9 231 aa10.52□□□□□ -0.73
APOBEC3B-202ENST00000335760 FAM24BQ8N5W8 94 aa10.52□□□□□ -0.73
APOBEC3B-202ENST00000335760 DCANP1Q8TF63 244 aa10.52□□□□□ -0.73
APOBEC3B-202ENST00000335760 FAM167A-AS1Q96KT0 104 aa10.52□□□□□ -0.73
APOBEC3B-202ENST00000335760 C17orf77Q96MU5 243 aa10.52□□□□□ -0.73
APOBEC3B-202ENST00000335760 RPRMQ9NS64 109 aa10.52□□□□□ -0.73
APOBEC3B-202ENST00000335760 TMEM14CQ9P0S9 112 aa10.52□□□□□ -0.73
APOBEC3B-202ENST00000335760 UBQLN2Q9UHD9 624 aa10.52□□□□□ -0.73
APOBEC3B-202ENST00000335760 A0A087X0K7 114 aa10.51□□□□□ -0.73
APOBEC3B-202ENST00000335760 PYYP10082 97 aa10.51□□□□□ -0.73
APOBEC3B-202ENST00000335760 CDC34P49427 236 aaPredicted RBP10.51□□□□□ -0.73
APOBEC3B-202ENST00000335760 MEOX2P50222 304 aa10.51□□□□□ -0.73
APOBEC3B-202ENST00000335760 TAS2R45P59539 299 aa10.51□□□□□ -0.73
APOBEC3B-202ENST00000335760 RPP25LQ8N5L8 163 aaKnown RBP10.51□□□□□ -0.73
APOBEC3B-202ENST00000335760 C16orf92Q96LL3 132 aa10.51□□□□□ -0.73
APOBEC3B-202ENST00000335760 ACTR3CQ9C0K3 210 aaPredicted RBP10.51□□□□□ -0.73
APOBEC3B-202ENST00000335760 OR51M1Q9H341 326 aa10.51□□□□□ -0.73
APOBEC3B-202ENST00000335760 PLA2G2EQ9NZK7 142 aa10.51□□□□□ -0.73
APOBEC3B-202ENST00000335760 H3BQ15 152 aa10.5□□□□□ -0.73
APOBEC3B-202ENST00000335760 H3BTX0 84 aa10.5□□□□□ -0.73
APOBEC3B-202ENST00000335760 SOCS3O14543 225 aa10.5□□□□□ -0.73
APOBEC3B-202ENST00000335760 HMGB3O15347 200 aaKnown RBP10.5□□□□□ -0.73
APOBEC3B-202ENST00000335760 OR7C2O60412 319 aa10.5□□□□□ -0.73
APOBEC3B-202ENST00000335760 ZNF688P0C7X2 276 aa10.5□□□□□ -0.73
APOBEC3B-202ENST00000335760 IGLC2P0DOY2 106 aa10.5□□□□□ -0.73
APOBEC3B-202ENST00000335760 CMC4P56277 68 aaPredicted RBP10.5□□□□□ -0.73
APOBEC3B-202ENST00000335760 DEFA6Q01524 100 aa10.5□□□□□ -0.73
APOBEC3B-202ENST00000335760 ODF3L2Q3SX64 289 aa10.5□□□□□ -0.73
APOBEC3B-202ENST00000335760 KHDC3LQ587J8 217 aa10.5□□□□□ -0.73
APOBEC3B-202ENST00000335760 TMED6Q8WW62 240 aa10.5□□□□□ -0.73
APOBEC3B-202ENST00000335760 RAB24Q969Q5 203 aa10.5□□□□□ -0.73
APOBEC3B-202ENST00000335760 PAXXQ9BUH6 204 aa10.5□□□□□ -0.73
APOBEC3B-202ENST00000335760 WFDC10AQ9H1F0 79 aa10.5□□□□□ -0.73
APOBEC3B-202ENST00000335760 C19orf73Q9NVV2 129 aa10.5□□□□□ -0.73
APOBEC3B-202ENST00000335760 NOTCH1P46531 2555 aa10.49□□□□□ -0.73
APOBEC3B-202ENST00000335760 OR11H12B2RN74 326 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms