RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 HIST1H1AQ02539 215 aaPredicted RBP11.15□□□□□ -0.62
SF1-202ENST00000334944 OSTCQ9NRP0 149 aa11.15□□□□□ -0.62
SF1-202ENST00000334944 TRAV26-1A0A087WT03 109 aa11.15□□□□□ -0.63
SF1-202ENST00000334944 VWC2LB2RUY7 222 aa11.15□□□□□ -0.63
SF1-202ENST00000334944 SLC25A17O43808 307 aa11.15□□□□□ -0.63
SF1-202ENST00000334944 TMEM97Q5BJF2 176 aa11.15□□□□□ -0.63
SF1-202ENST00000334944 MORN5Q5VZ52 161 aa11.15□□□□□ -0.63
SF1-202ENST00000334944 OR2K2Q8NGT1 345 aa11.15□□□□□ -0.63
SF1-202ENST00000334944 TRAV5A0A0B4J249 113 aa11.14□□□□□ -0.63
SF1-202ENST00000334944 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.14□□□□□ -0.63
SF1-202ENST00000334944 HIST1H1EP10412 219 aaKnown RBP11.14□□□□□ -0.63
SF1-202ENST00000334944 RAB9AP51151 201 aa11.14□□□□□ -0.63
SF1-202ENST00000334944 BPIFA4PQ86YQ2 179 aa11.14□□□□□ -0.63
SF1-202ENST00000334944 OR10AG1Q8NH19 301 aa11.14□□□□□ -0.63
SF1-202ENST00000334944 C11orf52Q96A22 123 aa11.14□□□□□ -0.63
SF1-202ENST00000334944 FLYWCH2Q96CP2 140 aaKnown RBP11.14□□□□□ -0.63
SF1-202ENST00000334944 NABP2Q9BQ15 211 aa11.14□□□□□ -0.63
SF1-202ENST00000334944 LOXP28300 417 aaPredicted RBP11.14□□□□□ -0.63
SF1-202ENST00000334944 RAB31Q13636 194 aa11.14□□□□□ -0.63
SF1-202ENST00000334944 ZNF833PQ6ZTB9 187 aa11.14□□□□□ -0.63
SF1-202ENST00000334944 TCF24Q7RTU0 167 aa11.14□□□□□ -0.63
SF1-202ENST00000334944 CHODLQ9H9P2 273 aa11.14□□□□□ -0.63
SF1-202ENST00000334944 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.13□□□□□ -0.63
SF1-202ENST00000334944 A0A1W2PRE2 83 aa11.13□□□□□ -0.63
SF1-202ENST00000334944 RNASE2P10153 161 aaKnown RBP11.13□□□□□ -0.63
SF1-202ENST00000334944 CDSNQ15517 529 aa11.13□□□□□ -0.63
SF1-202ENST00000334944 TMEM191AQ9H0A3 160 aa11.13□□□□□ -0.63
SF1-202ENST00000334944 A0A0G2JLM5 398 aa11.13□□□□□ -0.63
SF1-202ENST00000334944 NDUFS8O00217 210 aa11.13□□□□□ -0.63
SF1-202ENST00000334944 CNTFRP26992 372 aa11.13□□□□□ -0.63
SF1-202ENST00000334944 WT1-ASQ06250 92 aa11.13□□□□□ -0.63
SF1-202ENST00000334944 RUSC1-AS1Q66K80 236 aa11.13□□□□□ -0.63
SF1-202ENST00000334944 TXNDC17Q9BRA2 123 aa11.13□□□□□ -0.63
SF1-202ENST00000334944 NPFFR1Q9GZQ6 430 aa11.13□□□□□ -0.63
SF1-202ENST00000334944 LINC00574Q9H8X3 128 aa11.13□□□□□ -0.63
SF1-202ENST00000334944 SPCS1Q9Y6A9 102 aa11.13□□□□□ -0.63
SF1-202ENST00000334944 HIGD1CA8MV81 97 aa11.12□□□□□ -0.63
SF1-202ENST00000334944 ISLRO14498 428 aa11.12□□□□□ -0.63
SF1-202ENST00000334944 PRB4P10163 310 aaPredicted RBP11.12□□□□□ -0.63
SF1-202ENST00000334944 PRR20EP86478 221 aa11.12□□□□□ -0.63
SF1-202ENST00000334944 PRR20CP86479 221 aa11.12□□□□□ -0.63
SF1-202ENST00000334944 PRR20DP86480 221 aa11.12□□□□□ -0.63
SF1-202ENST00000334944 PRR20BP86481 221 aa11.12□□□□□ -0.63
SF1-202ENST00000334944 PRR20AP86496 221 aa11.12□□□□□ -0.63
SF1-202ENST00000334944 KIR3DS1Q14943 382 aa11.12□□□□□ -0.63
SF1-202ENST00000334944 HCP5Q6MZN7 132 aa11.12□□□□□ -0.63
SF1-202ENST00000334944 NEGR1Q7Z3B1 354 aa11.12□□□□□ -0.63
SF1-202ENST00000334944 JKAMPQ9P055 326 aa11.12□□□□□ -0.63
SF1-202ENST00000334944 MRPL36Q9P0J6 103 aaKnown RBP11.12□□□□□ -0.63
SF1-202ENST00000334944 TSSC4Q9Y5U2 329 aaPredicted RBP11.12□□□□□ -0.63
SF1-202ENST00000334944 K7EP34 96 aa11.12□□□□□ -0.63
SF1-202ENST00000334944 K7EMI3 77 aa11.12□□□□□ -0.63
SF1-202ENST00000334944 COX7A1P24310 79 aa11.12□□□□□ -0.63
SF1-202ENST00000334944 POU2AF1Q16633 256 aa11.12□□□□□ -0.63
SF1-202ENST00000334944 TMEM249Q2WGJ8 235 aa11.12□□□□□ -0.63
SF1-202ENST00000334944 C9orf118A6NHY6 69 aa11.11□□□□□ -0.63
SF1-202ENST00000334944 NCR2O95944 276 aa11.11□□□□□ -0.63
SF1-202ENST00000334944 MTURNQ8N3F0 131 aa11.11□□□□□ -0.63
SF1-202ENST00000334944 STXBP6Q8NFX7 210 aa11.11□□□□□ -0.63
SF1-202ENST00000334944 CGB1A6NKQ9 187 aa11.11□□□□□ -0.63
SF1-202ENST00000334944 K7ENP7 123 aa11.11□□□□□ -0.63
SF1-202ENST00000334944 APOBEC3AP31941 199 aaPredicted RBP11.11□□□□□ -0.63
SF1-202ENST00000334944 CRYBA4P53673 196 aa11.11□□□□□ -0.63
SF1-202ENST00000334944 SCGB2A2Q13296 93 aa11.11□□□□□ -0.63
SF1-202ENST00000334944 OR5AN1Q8NGI8 311 aa11.11□□□□□ -0.63
SF1-202ENST00000334944 ZNF503Q96F45 646 aa11.11□□□□□ -0.63
SF1-202ENST00000334944 A0A1B0GV72 72 aa11.1□□□□□ -0.63
SF1-202ENST00000334944 NPIPB3Q92617 1050 aa11.1□□□□□ -0.63
SF1-202ENST00000334944 ATP6V0BQ99437 205 aa11.1□□□□□ -0.63
SF1-202ENST00000334944 SIGMAR1Q99720 223 aa11.1□□□□□ -0.63
SF1-202ENST00000334944 RABAC1Q9UI14 185 aa11.1□□□□□ -0.63
SF1-202ENST00000334944 ZNF257Q9Y2Q1 563 aa11.1□□□□□ -0.63
SF1-202ENST00000334944 COX19Q49B96 90 aa11.1□□□□□ -0.63
SF1-202ENST00000334944 NDUFA4L2Q9NRX3 87 aa11.1□□□□□ -0.63
SF1-202ENST00000334944 RAXQ9Y2V3 346 aa11.1□□□□□ -0.63
SF1-202ENST00000334944 F11RQ9Y624 299 aaKnown RBP11.1□□□□□ -0.63
SF1-202ENST00000334944 LY96Q9Y6Y9 160 aa11.1□□□□□ -0.63
SF1-202ENST00000334944 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.1□□□□□ -0.63
SF1-202ENST00000334944 AREGP15514 252 aa11.1□□□□□ -0.63
SF1-202ENST00000334944 OR4C13Q8NGP0 309 aa11.1□□□□□ -0.63
SF1-202ENST00000334944 OSR1Q8TAX0 266 aaPredicted RBP11.1□□□□□ -0.63
SF1-202ENST00000334944 HIVEP3Q5T1R4 2406 aa11.09□□□□□ -0.63
SF1-202ENST00000334944 PYYP10082 97 aa11.09□□□□□ -0.63
SF1-202ENST00000334944 CD69Q07108 199 aa11.09□□□□□ -0.63
SF1-202ENST00000334944 OR1L8Q8NGR8 309 aa11.09□□□□□ -0.63
SF1-202ENST00000334944 NEU4Q8WWR8 484 aaPredicted RBP11.09□□□□□ -0.63
SF1-202ENST00000334944 CD3EP07766 207 aa11.09□□□□□ -0.63
SF1-202ENST00000334944 IGHV1-8P0DP01 117 aa11.09□□□□□ -0.63
SF1-202ENST00000334944 FXYD7P58549 80 aa11.09□□□□□ -0.63
SF1-202ENST00000334944 CKS1BP61024 79 aa11.09□□□□□ -0.63
SF1-202ENST00000334944 HSD52Q0P140 79 aa11.09□□□□□ -0.63
SF1-202ENST00000334944 MBD6Q96DN6 1003 aa11.09□□□□□ -0.63
SF1-202ENST00000334944 MAP1LC3CQ9BXW4 147 aa11.09□□□□□ -0.63
SF1-202ENST00000334944 A0A1W2PRD5 423 aa11.08□□□□□ -0.64
SF1-202ENST00000334944 A0A1W2PRF3 423 aa11.08□□□□□ -0.64
SF1-202ENST00000334944 A0A1W2PRM7 423 aa11.08□□□□□ -0.64
SF1-202ENST00000334944 VSTM5A8MXK1 200 aa11.08□□□□□ -0.64
SF1-202ENST00000334944 MOSP00540 346 aa11.08□□□□□ -0.64
SF1-202ENST00000334944 ERHP84090 104 aaKnown RBP11.08□□□□□ -0.64
SF1-202ENST00000334944 KLF5Q13887 457 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms