RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 BPIFA4PQ86YQ2 179 aa18.48■□□□□ 0.55
NDEL1-201ENST00000334527 TIMD4Q96H15 378 aa18.48■□□□□ 0.55
NDEL1-201ENST00000334527 C17orf77Q96MU5 243 aa18.48■□□□□ 0.55
NDEL1-201ENST00000334527 TRBV19A0A075B6N1 114 aa18.47■□□□□ 0.55
NDEL1-201ENST00000334527 NPIPB6E9PJ23 425 aa18.47■□□□□ 0.55
NDEL1-201ENST00000334527 H3BRN7 92 aa18.47■□□□□ 0.55
NDEL1-201ENST00000334527 HOXB4P17483 251 aaPredicted RBP18.47■□□□□ 0.55
NDEL1-201ENST00000334527 CEACAM3P40198 252 aa18.47■□□□□ 0.55
NDEL1-201ENST00000334527 OR4F17Q8NGA8 305 aa18.47■□□□□ 0.55
NDEL1-201ENST00000334527 ARHGAP32A7KAX9 2087 aa18.47■□□□□ 0.55
NDEL1-201ENST00000334527 A0A1W2PRD5 423 aa18.46■□□□□ 0.55
NDEL1-201ENST00000334527 A0A1W2PRF3 423 aa18.46■□□□□ 0.55
NDEL1-201ENST00000334527 A0A1W2PRM7 423 aa18.46■□□□□ 0.55
NDEL1-201ENST00000334527 HES1Q14469 280 aa18.46■□□□□ 0.55
NDEL1-201ENST00000334527 KLF17Q5JT82 389 aaPredicted RBP18.46■□□□□ 0.55
NDEL1-201ENST00000334527 LCN12Q6JVE5 192 aa18.46■□□□□ 0.55
NDEL1-201ENST00000334527 NDUFA3O95167 84 aa18.46■□□□□ 0.55
NDEL1-201ENST00000334527 IL4P05112 153 aa18.46■□□□□ 0.55
NDEL1-201ENST00000334527 RPLP1P05386 114 aaKnown RBP18.46■□□□□ 0.55
NDEL1-201ENST00000334527 FOXA3P55318 350 aaPredicted RBP18.46■□□□□ 0.55
NDEL1-201ENST00000334527 ATOH7Q8N100 152 aa18.46■□□□□ 0.55
NDEL1-201ENST00000334527 ZNF491Q8N8L2 437 aa18.46■□□□□ 0.55
NDEL1-201ENST00000334527 NPBQ8NG41 125 aa18.46■□□□□ 0.55
NDEL1-201ENST00000334527 RNF125Q96EQ8 232 aa18.46■□□□□ 0.55
NDEL1-201ENST00000334527 S4R3C0 116 aa18.46■□□□□ 0.55
NDEL1-201ENST00000334527 FBLN7Q53RD9 439 aa18.45■□□□□ 0.54
NDEL1-201ENST00000334527 EBLN2Q6P2I7 272 aa18.45■□□□□ 0.54
NDEL1-201ENST00000334527 RELNP78509 3460 aa18.45■□□□□ 0.54
NDEL1-201ENST00000334527 ABCA4P78363 2273 aa18.45■□□□□ 0.54
NDEL1-201ENST00000334527 LOC105371242A0A075B767 164 aa18.45■□□□□ 0.54
NDEL1-201ENST00000334527 FAM231BA6NCW3 169 aa18.45■□□□□ 0.54
NDEL1-201ENST00000334527 URB1-AS1Q96HZ7 61 aa18.45■□□□□ 0.54
NDEL1-201ENST00000334527 RNF24Q9Y225 148 aa18.45■□□□□ 0.54
NDEL1-201ENST00000334527 IGLC2P0DOY2 106 aa18.44■□□□□ 0.54
NDEL1-201ENST00000334527 BATFQ16520 125 aa18.44■□□□□ 0.54
NDEL1-201ENST00000334527 HLA-DRB1P01911 266 aa18.44■□□□□ 0.54
NDEL1-201ENST00000334527 G0S2P27469 103 aa18.44■□□□□ 0.54
NDEL1-201ENST00000334527 ADORA2A-AS1P86434 159 aa18.44■□□□□ 0.54
NDEL1-201ENST00000334527 ODF3BA8MYP8 253 aa18.43■□□□□ 0.54
NDEL1-201ENST00000334527 M0R1W7 72 aa18.43■□□□□ 0.54
NDEL1-201ENST00000334527 PRB4P10163 310 aaPredicted RBP18.43■□□□□ 0.54
NDEL1-201ENST00000334527 SIGLEC15Q6ZMC9 328 aa18.43■□□□□ 0.54
NDEL1-201ENST00000334527 TRBV6-1A0A0K0K1D8 114 aa18.42■□□□□ 0.54
NDEL1-201ENST00000334527 M0QZ24 198 aa18.42■□□□□ 0.54
NDEL1-201ENST00000334527 IGLC3P0DOY3 106 aa18.42■□□□□ 0.54
NDEL1-201ENST00000334527 BTF3P20290 206 aaKnown RBP18.42■□□□□ 0.54
NDEL1-201ENST00000334527 C5orf64Q2M2E5 130 aa18.42■□□□□ 0.54
NDEL1-201ENST00000334527 TMEM75Q8N9X5 138 aa18.42■□□□□ 0.54
NDEL1-201ENST00000334527 ZC2HC1AQ96GY0 325 aa18.42■□□□□ 0.54
NDEL1-201ENST00000334527 UQCR10Q9UDW1 63 aa18.42■□□□□ 0.54
NDEL1-201ENST00000334527 CHEK1O14757 476 aa18.42■□□□□ 0.54
NDEL1-201ENST00000334527 FCGR2BP31994 310 aaPredicted RBP18.42■□□□□ 0.54
NDEL1-201ENST00000334527 PMCHL1Q16048 86 aa18.42■□□□□ 0.54
NDEL1-201ENST00000334527 ASCL2Q99929 193 aa18.42■□□□□ 0.54
NDEL1-201ENST00000334527 GNG7O60262 68 aa18.41■□□□□ 0.54
NDEL1-201ENST00000334527 PRTN3P24158 256 aa18.41■□□□□ 0.54
NDEL1-201ENST00000334527 MAJINQ3KP22 176 aa18.41■□□□□ 0.54
NDEL1-201ENST00000334527 Q56UQ5 140 aa18.41■□□□□ 0.54
NDEL1-201ENST00000334527 FAM162BQ5T6X4 162 aa18.41■□□□□ 0.54
NDEL1-201ENST00000334527 WI2-2373I1.2A0A1W2PRP0 233 aa18.41■□□□□ 0.54
NDEL1-201ENST00000334527 ZNF785A8K8V0 405 aa18.41■□□□□ 0.54
NDEL1-201ENST00000334527 C16orf54Q6UWD8 224 aa18.41■□□□□ 0.54
NDEL1-201ENST00000334527 C2orf70A6NJV1 201 aa18.4■□□□□ 0.54
NDEL1-201ENST00000334527 K7EQM0 130 aa18.4■□□□□ 0.54
NDEL1-201ENST00000334527 LYPD1Q8N2G4 141 aa18.4■□□□□ 0.54
NDEL1-201ENST00000334527 TXN2Q99757 166 aa18.4■□□□□ 0.54
NDEL1-201ENST00000334527 CLEC5AQ9NY25 188 aa18.4■□□□□ 0.54
NDEL1-201ENST00000334527 SH2D7A6NKC9 451 aaPredicted RBP18.4■□□□□ 0.54
NDEL1-201ENST00000334527 MRPS12O15235 138 aaKnown RBP18.4■□□□□ 0.54
NDEL1-201ENST00000334527 C11orf71Q6IPW1 123 aa18.4■□□□□ 0.54
NDEL1-201ENST00000334527 BCL6BQ8N143 479 aaPredicted RBP18.4■□□□□ 0.54
NDEL1-201ENST00000334527 KIR3DL3Q8N743 410 aa18.4■□□□□ 0.54
NDEL1-201ENST00000334527 KLHDC1Q8N7A1 406 aa18.4■□□□□ 0.54
NDEL1-201ENST00000334527 TMEM190Q8WZ59 177 aa18.4■□□□□ 0.54
NDEL1-201ENST00000334527 ZNF414Q96IQ9 312 aa18.4■□□□□ 0.54
NDEL1-201ENST00000334527 ZFP30Q9Y2G7 519 aa18.4■□□□□ 0.54
NDEL1-201ENST00000334527 SPTA1P02549 2419 aa18.4■□□□□ 0.54
NDEL1-201ENST00000334527 LOC102724200A0A096LPH7 203 aaPredicted RBP18.39■□□□□ 0.53
NDEL1-201ENST00000334527 HAX1O00165 279 aa18.39■□□□□ 0.53
NDEL1-201ENST00000334527 APOHP02749 345 aaPredicted RBP18.39■□□□□ 0.53
NDEL1-201ENST00000334527 ZNF25P17030 456 aaPredicted RBP18.39■□□□□ 0.53
NDEL1-201ENST00000334527 FANCD2OSQ96PS1 177 aa18.39■□□□□ 0.53
NDEL1-201ENST00000334527 PSG8Q9UQ74 426 aa18.39■□□□□ 0.53
NDEL1-201ENST00000334527 MSRB2Q9Y3D2 182 aa18.39■□□□□ 0.53
NDEL1-201ENST00000334527 TRAV30A0A087WSZ9 112 aa18.39■□□□□ 0.53
NDEL1-201ENST00000334527 PSG3Q16557 428 aa18.39■□□□□ 0.53
NDEL1-201ENST00000334527 Q6ZN92 141 aa18.39■□□□□ 0.53
NDEL1-201ENST00000334527 HRNRQ86YZ3 2850 aaPredicted RBP18.38■□□□□ 0.53
NDEL1-201ENST00000334527 IGLV11-55A0A075B6I3 123 aa18.38■□□□□ 0.53
NDEL1-201ENST00000334527 MFAP4P55083 255 aa18.38■□□□□ 0.53
NDEL1-201ENST00000334527 ARPC1AQ92747 370 aa18.38■□□□□ 0.53
NDEL1-201ENST00000334527 NCBP2LA6PVI3 153 aaKnown RBP18.38■□□□□ 0.53
NDEL1-201ENST00000334527 NPIPB5A8MRT5 1133 aa18.38■□□□□ 0.53
NDEL1-201ENST00000334527 KLRB1Q12918 225 aa18.38■□□□□ 0.53
NDEL1-201ENST00000334527 ZNF562Q6V9R5 426 aa18.38■□□□□ 0.53
NDEL1-201ENST00000334527 NEU4Q8WWR8 484 aaPredicted RBP18.38■□□□□ 0.53
NDEL1-201ENST00000334527 CHCHD1Q96BP2 118 aaKnown RBP18.38■□□□□ 0.53
NDEL1-201ENST00000334527 M0R3E3 92 aa18.37■□□□□ 0.53
NDEL1-201ENST00000334527 FAM120AOSQ5T036 256 aa18.37■□□□□ 0.53
NDEL1-201ENST00000334527 DYNAPQ8N1N2 210 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms