RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 OR4C46A6NHA9 309 aa11.99□□□□□ -0.49
LRRC28-202ENST00000331450 K7EIL1 84 aa11.99□□□□□ -0.49
LRRC28-202ENST00000331450 K7EQG2 157 aa11.99□□□□□ -0.49
LRRC28-202ENST00000331450 MRPS12O15235 138 aaKnown RBP11.99□□□□□ -0.49
LRRC28-202ENST00000331450 JTBO76095 146 aa11.99□□□□□ -0.49
LRRC28-202ENST00000331450 LGALSLQ3ZCW2 172 aaPredicted RBP11.99□□□□□ -0.49
LRRC28-202ENST00000331450 FFAR4Q5NUL3 377 aa11.99□□□□□ -0.49
LRRC28-202ENST00000331450 C17orf77Q96MU5 243 aa11.99□□□□□ -0.49
LRRC28-202ENST00000331450 SH3BGRL3Q9H299 93 aa11.99□□□□□ -0.49
LRRC28-202ENST00000331450 C19orf73Q9NVV2 129 aa11.99□□□□□ -0.49
LRRC28-202ENST00000331450 SMAD5-AS1Q9Y6J3 95 aa11.99□□□□□ -0.49
LRRC28-202ENST00000331450 DNAH3Q8TD57 4116 aa11.98□□□□□ -0.49
LRRC28-202ENST00000331450 CD7P09564 240 aa11.98□□□□□ -0.49
LRRC28-202ENST00000331450 RPL11P62913 178 aaKnown RBP11.98□□□□□ -0.49
LRRC28-202ENST00000331450 ZFP69Q49AA0 526 aa11.98□□□□□ -0.49
LRRC28-202ENST00000331450 TMUB2Q71RG4 321 aa11.98□□□□□ -0.49
LRRC28-202ENST00000331450 GTSCR1Q86UQ5 136 aa11.98□□□□□ -0.49
LRRC28-202ENST00000331450 GBGT1Q8N5D6 347 aa11.98□□□□□ -0.49
LRRC28-202ENST00000331450 STXBP6Q8NFX7 210 aa11.98□□□□□ -0.49
LRRC28-202ENST00000331450 NRN1Q9NPD7 142 aa11.98□□□□□ -0.49
LRRC28-202ENST00000331450 RNF24Q9Y225 148 aa11.98□□□□□ -0.49
LRRC28-202ENST00000331450 KANTRA0A1W2PQU2 76 aa11.97□□□□□ -0.49
LRRC28-202ENST00000331450 RPL7P18124 248 aaKnown RBP11.97□□□□□ -0.49
LRRC28-202ENST00000331450 GALR1P47211 349 aa11.97□□□□□ -0.49
LRRC28-202ENST00000331450 CD81P60033 236 aa11.97□□□□□ -0.49
LRRC28-202ENST00000331450 PAFAH1B2P68402 229 aa11.97□□□□□ -0.49
LRRC28-202ENST00000331450 DEFA6Q01524 100 aa11.97□□□□□ -0.49
LRRC28-202ENST00000331450 ODF3L2Q3SX64 289 aa11.97□□□□□ -0.49
LRRC28-202ENST00000331450 C9orf62Q8N4C0 152 aa11.97□□□□□ -0.49
LRRC28-202ENST00000331450 FAM24BQ8N5W8 94 aa11.97□□□□□ -0.49
LRRC28-202ENST00000331450 GNPNAT1Q96EK6 184 aaPredicted RBP11.97□□□□□ -0.49
LRRC28-202ENST00000331450 FAM110AQ9BQ89 295 aa11.97□□□□□ -0.49
LRRC28-202ENST00000331450 MRPL32Q9BYC8 188 aaKnown RBP11.97□□□□□ -0.49
LRRC28-202ENST00000331450 SEPSECSQ9HD40 501 aaKnown RBP11.97□□□□□ -0.49
LRRC28-202ENST00000331450 SOCS3O14543 225 aa11.96□□□□□ -0.49
LRRC28-202ENST00000331450 TFPI2P48307 235 aa11.96□□□□□ -0.49
LRRC28-202ENST00000331450 SERF2P84101 59 aa11.96□□□□□ -0.49
LRRC28-202ENST00000331450 FAM78BQ5VT40 261 aa11.96□□□□□ -0.49
LRRC28-202ENST00000331450 SPATA31B1PQ5VZV4 182 aa11.96□□□□□ -0.49
LRRC28-202ENST00000331450 A0A087X0K7 114 aa11.95□□□□□ -0.5
LRRC28-202ENST00000331450 TRAV5A0A0B4J249 113 aa11.95□□□□□ -0.5
LRRC28-202ENST00000331450 DNASE2O00115 360 aaPredicted RBP11.95□□□□□ -0.5
LRRC28-202ENST00000331450 PFDN1O60925 122 aa11.95□□□□□ -0.5
LRRC28-202ENST00000331450 SPP1P10451 314 aa11.95□□□□□ -0.5
LRRC28-202ENST00000331450 M6PRP20645 277 aa11.95□□□□□ -0.5
LRRC28-202ENST00000331450 RAB2AP61019 212 aa11.95□□□□□ -0.5
LRRC28-202ENST00000331450 ACOT6Q3I5F7 207 aaPredicted RBP11.95□□□□□ -0.5
LRRC28-202ENST00000331450 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.95□□□□□ -0.5
LRRC28-202ENST00000331450 MIR17HGQ75NE6 70 aa11.95□□□□□ -0.5
LRRC28-202ENST00000331450 FAM167A-AS1Q96KT0 104 aa11.95□□□□□ -0.5
LRRC28-202ENST00000331450 WFDC10AQ9H1F0 79 aa11.95□□□□□ -0.5
LRRC28-202ENST00000331450 MAP6D1Q9H9H5 199 aa11.95□□□□□ -0.5
LRRC28-202ENST00000331450 FUT9Q9Y231 359 aa11.95□□□□□ -0.5
LRRC28-202ENST00000331450 IGLC2P0DOY2 106 aa11.94□□□□□ -0.5
LRRC28-202ENST00000331450 MEOX2P50222 304 aa11.94□□□□□ -0.5
LRRC28-202ENST00000331450 BPIFA4PQ86YQ2 179 aa11.94□□□□□ -0.5
LRRC28-202ENST00000331450 WFDC3Q8IUB2 231 aa11.94□□□□□ -0.5
LRRC28-202ENST00000331450 STOML3Q8TAV4 291 aa11.94□□□□□ -0.5
LRRC28-202ENST00000331450 ZNF471Q9BX82 626 aaPredicted RBP11.94□□□□□ -0.5
LRRC28-202ENST00000331450 SLC25A2Q9BXI2 301 aa11.94□□□□□ -0.5
LRRC28-202ENST00000331450 TMEM14CQ9P0S9 112 aa11.94□□□□□ -0.5
LRRC28-202ENST00000331450 RHOBP62745 196 aa11.93□□□□□ -0.5
LRRC28-202ENST00000331450 RPP25LQ8N5L8 163 aaKnown RBP11.93□□□□□ -0.5
LRRC28-202ENST00000331450 UBQLN2Q9UHD9 624 aa11.93□□□□□ -0.5
LRRC28-202ENST00000331450 A8MZ25 164 aa11.92□□□□□ -0.5
LRRC28-202ENST00000331450 OR11H12B2RN74 326 aa11.92□□□□□ -0.5
LRRC28-202ENST00000331450 ZNF688P0C7X2 276 aa11.92□□□□□ -0.5
LRRC28-202ENST00000331450 ATF4P18848 351 aaPredicted RBP11.92□□□□□ -0.5
LRRC28-202ENST00000331450 PSMB3P49720 205 aa11.92□□□□□ -0.5
LRRC28-202ENST00000331450 OR10G4Q8NGN3 311 aa11.92□□□□□ -0.5
LRRC28-202ENST00000331450 OR10G9Q8NGN4 311 aa11.92□□□□□ -0.5
LRRC28-202ENST00000331450 OR10G7Q8NGN6 311 aa11.92□□□□□ -0.5
LRRC28-202ENST00000331450 HRH4Q9H3N8 390 aa11.92□□□□□ -0.5
LRRC28-202ENST00000331450 H3BQ15 152 aa11.91□□□□□ -0.5
LRRC28-202ENST00000331450 ISLRO14498 428 aa11.91□□□□□ -0.5
LRRC28-202ENST00000331450 MBP02144 154 aa11.91□□□□□ -0.5
LRRC28-202ENST00000331450 SEC11BP0C7V7 166 aa11.91□□□□□ -0.5
LRRC28-202ENST00000331450 IGHV4-30-4P0DP06 118 aa11.91□□□□□ -0.5
LRRC28-202ENST00000331450 TPT1P13693 172 aaKnown RBP11.91□□□□□ -0.5
LRRC28-202ENST00000331450 NKX2-5P52952 324 aaPredicted RBP11.91□□□□□ -0.5
LRRC28-202ENST00000331450 CMC4P56277 68 aaPredicted RBP11.91□□□□□ -0.5
LRRC28-202ENST00000331450 EIF5AP63241 154 aaKnown RBP11.91□□□□□ -0.5
LRRC28-202ENST00000331450 TMEM41BQ5BJD5 291 aa11.91□□□□□ -0.5
LRRC28-202ENST00000331450 SAMD13Q5VXD3 122 aa11.91□□□□□ -0.5
LRRC28-202ENST00000331450 FAM122CQ6P4D5 195 aa11.91□□□□□ -0.5
LRRC28-202ENST00000331450 BAP18Q8IXM2 172 aa11.91□□□□□ -0.5
LRRC28-202ENST00000331450 DEFB125Q8N687 156 aa11.91□□□□□ -0.5
LRRC28-202ENST00000331450 MRAPQ8TCY5 172 aa11.91□□□□□ -0.5
LRRC28-202ENST00000331450 ZNF503Q96F45 646 aa11.91□□□□□ -0.5
LRRC28-202ENST00000331450 CITED4Q96RK1 184 aa11.91□□□□□ -0.5
LRRC28-202ENST00000331450 RPRMQ9NS64 109 aa11.91□□□□□ -0.5
LRRC28-202ENST00000331450 TRAV8-2A0A0B4J237 113 aa11.9□□□□□ -0.5
LRRC28-202ENST00000331450 PYYP10082 97 aa11.9□□□□□ -0.5
LRRC28-202ENST00000331450 CDC34P49427 236 aaPredicted RBP11.9□□□□□ -0.5
LRRC28-202ENST00000331450 DEFB131AP59861 70 aa11.9□□□□□ -0.5
LRRC28-202ENST00000331450 KHDC3LQ587J8 217 aa11.9□□□□□ -0.5
LRRC28-202ENST00000331450 LCN15Q6UWW0 184 aa11.9□□□□□ -0.5
LRRC28-202ENST00000331450 SAT2Q96F10 170 aaPredicted RBP11.9□□□□□ -0.5
LRRC28-202ENST00000331450 ZNF586Q9NXT0 402 aa11.9□□□□□ -0.5
LRRC28-202ENST00000331450 PLA2G2EQ9NZK7 142 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 1259.4 ms