RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 NPFFR1Q9GZQ6 430 aa14.47□□□□□ -0.09
CLSTN3-202ENST00000331148 SPTBN4Q9H254 2564 aa14.47□□□□□ -0.09
CLSTN3-202ENST00000331148 ATMQ13315 3056 aa14.47□□□□□ -0.09
CLSTN3-202ENST00000331148 CGB1A6NKQ9 187 aa14.46□□□□□ -0.09
CLSTN3-202ENST00000331148 SMAD7O15105 426 aaKnown RBP14.46□□□□□ -0.09
CLSTN3-202ENST00000331148 GP9P14770 177 aa14.46□□□□□ -0.09
CLSTN3-202ENST00000331148 C10orf55Q5SWW7 151 aa14.46□□□□□ -0.09
CLSTN3-202ENST00000331148 C16orf54Q6UWD8 224 aa14.46□□□□□ -0.09
CLSTN3-202ENST00000331148 CIARTQ8N365 385 aaPredicted RBP14.46□□□□□ -0.09
CLSTN3-202ENST00000331148 TMEM186Q96B77 213 aa14.46□□□□□ -0.09
CLSTN3-202ENST00000331148 MRPL20Q9BYC9 149 aaKnown RBP14.46□□□□□ -0.09
CLSTN3-202ENST00000331148 PTPRQQ9UMZ3 2332 aa14.46□□□□□ -0.09
CLSTN3-202ENST00000331148 IGHV1-18A0A0C4DH31 117 aa14.46□□□□□ -0.09
CLSTN3-202ENST00000331148 A0A1W2PPM0 123 aa14.46□□□□□ -0.09
CLSTN3-202ENST00000331148 PRRG2O14669 202 aa14.46□□□□□ -0.09
CLSTN3-202ENST00000331148 LHBP01229 141 aa14.46□□□□□ -0.09
CLSTN3-202ENST00000331148 ZCCHC24Q8N2G6 241 aaKnown RBP14.46□□□□□ -0.09
CLSTN3-202ENST00000331148 TMEM116Q8NCL8 245 aa14.46□□□□□ -0.09
CLSTN3-202ENST00000331148 OR8A1Q8NGG7 326 aa14.46□□□□□ -0.09
CLSTN3-202ENST00000331148 OR9G4Q8NGQ1 327 aa14.46□□□□□ -0.09
CLSTN3-202ENST00000331148 PRSS3P2Q8NHM4 247 aa14.46□□□□□ -0.09
CLSTN3-202ENST00000331148 FAM222BQ8WU58 562 aa14.46□□□□□ -0.09
CLSTN3-202ENST00000331148 RAB37Q96AX2 223 aa14.46□□□□□ -0.09
CLSTN3-202ENST00000331148 THYN1Q9P016 225 aa14.46□□□□□ -0.09
CLSTN3-202ENST00000331148 RPUSD1Q9UJJ7 312 aaKnown RBP14.46□□□□□ -0.09
CLSTN3-202ENST00000331148 SPCS1Q9Y6A9 102 aa14.46□□□□□ -0.09
CLSTN3-202ENST00000331148 A0A1B0GUT8 65 aa14.45□□□□□ -0.1
CLSTN3-202ENST00000331148 A1L4Q6 167 aa14.45□□□□□ -0.1
CLSTN3-202ENST00000331148 IGLV1-44P01699 117 aa14.45□□□□□ -0.1
CLSTN3-202ENST00000331148 ADAMTSL5Q6ZMM2 481 aa14.45□□□□□ -0.1
CLSTN3-202ENST00000331148 Q71RC1 249 aaPredicted RBP14.45□□□□□ -0.1
CLSTN3-202ENST00000331148 A0A096LNJ9 63 aa14.45□□□□□ -0.1
CLSTN3-202ENST00000331148 TRAV8-1A0A0A6YYK1 113 aa14.45□□□□□ -0.1
CLSTN3-202ENST00000331148 C22orf46C9J442 243 aa14.45□□□□□ -0.1
CLSTN3-202ENST00000331148 ARMS2P0C7Q2 107 aa14.45□□□□□ -0.1
CLSTN3-202ENST00000331148 SMIM17P0DL12 118 aa14.45□□□□□ -0.1
CLSTN3-202ENST00000331148 APOBEC3AP31941 199 aaPredicted RBP14.45□□□□□ -0.1
CLSTN3-202ENST00000331148 SUB1P53999 127 aaKnown RBP eCLIP14.45□□□□□ -0.1
CLSTN3-202ENST00000331148 hADV38S2A0JD32 116 aa14.44□□□□□ -0.1
CLSTN3-202ENST00000331148 CEACAM3P40198 252 aa14.44□□□□□ -0.1
CLSTN3-202ENST00000331148 SAMD13Q5VXD3 122 aa14.44□□□□□ -0.1
CLSTN3-202ENST00000331148 GFRALQ6UXV0 394 aa14.44□□□□□ -0.1
CLSTN3-202ENST00000331148 ZNF833PQ6ZTB9 187 aa14.44□□□□□ -0.1
CLSTN3-202ENST00000331148 GATD1Q8NB37 220 aa14.44□□□□□ -0.1
CLSTN3-202ENST00000331148 LINC00574Q9H8X3 128 aa14.44□□□□□ -0.1
CLSTN3-202ENST00000331148 FAM106CPP0CH98 169 aa14.44□□□□□ -0.1
CLSTN3-202ENST00000331148 RIGQ13278 110 aa14.44□□□□□ -0.1
CLSTN3-202ENST00000331148 FAM106AQ4KMX7 169 aa14.44□□□□□ -0.1
CLSTN3-202ENST00000331148 OR4A5Q8NH83 315 aa14.44□□□□□ -0.1
CLSTN3-202ENST00000331148 SIVA1O15304 175 aa14.43□□□□□ -0.1
CLSTN3-202ENST00000331148 TCTAP57738 103 aa14.43□□□□□ -0.1
CLSTN3-202ENST00000331148 LGALS9BQ3B8N2 356 aa14.43□□□□□ -0.1
CLSTN3-202ENST00000331148 RUSC1-AS1Q66K80 236 aa14.43□□□□□ -0.1
CLSTN3-202ENST00000331148 LGALS9CQ6DKI2 356 aa14.43□□□□□ -0.1
CLSTN3-202ENST00000331148 OR4X2Q8NGF9 303 aa14.43□□□□□ -0.1
CLSTN3-202ENST00000331148 PLP1P60201 277 aa14.43□□□□□ -0.1
CLSTN3-202ENST00000331148 LOXL1Q08397 574 aaPredicted RBP14.43□□□□□ -0.1
CLSTN3-202ENST00000331148 ZNF474Q6S9Z5 364 aaPredicted RBP14.43□□□□□ -0.1
CLSTN3-202ENST00000331148 TMEM167AQ8TBQ9 72 aa14.43□□□□□ -0.1
CLSTN3-202ENST00000331148 IGLV2-11P01706 119 aa14.42□□□□□ -0.1
CLSTN3-202ENST00000331148 IFI27P40305 119 aaPredicted RBP14.42□□□□□ -0.1
CLSTN3-202ENST00000331148 TMEM30BQ3MIR4 351 aa14.42□□□□□ -0.1
CLSTN3-202ENST00000331148 PRNTQ86SH4 94 aa14.42□□□□□ -0.1
CLSTN3-202ENST00000331148 FLYWCH2Q96CP2 140 aaKnown RBP14.42□□□□□ -0.1
CLSTN3-202ENST00000331148 GAFA1Q96PS6 74 aa14.42□□□□□ -0.1
CLSTN3-202ENST00000331148 PIEZO2Q9H5I5 2752 aa14.42□□□□□ -0.1
CLSTN3-202ENST00000331148 SPRY3O43610 288 aa14.41□□□□□ -0.1
CLSTN3-202ENST00000331148 PPIAL4GP0DN37 164 aa14.41□□□□□ -0.1
CLSTN3-202ENST00000331148 CACNG7P62955 275 aa14.41□□□□□ -0.1
CLSTN3-202ENST00000331148 SRSF12Q8WXF0 261 aaKnown RBP14.41□□□□□ -0.1
CLSTN3-202ENST00000331148 INSIG2Q9Y5U4 225 aa14.41□□□□□ -0.1
CLSTN3-202ENST00000331148 PRR14LQ5THK1 2151 aa14.41□□□□□ -0.1
CLSTN3-202ENST00000331148 FABP2P12104 132 aa14.41□□□□□ -0.1
CLSTN3-202ENST00000331148 PRR30Q53SZ7 412 aaPredicted RBP14.41□□□□□ -0.1
CLSTN3-202ENST00000331148 OTORQ9NRC9 128 aa14.41□□□□□ -0.1
CLSTN3-202ENST00000331148 DSCAML1Q8TD84 2053 aa14.4□□□□□ -0.1
CLSTN3-202ENST00000331148 ZNF785A8K8V0 405 aa14.4□□□□□ -0.1
CLSTN3-202ENST00000331148 GNG7O60262 68 aa14.4□□□□□ -0.1
CLSTN3-202ENST00000331148 GOLT1AQ6ZVE7 132 aa14.4□□□□□ -0.1
CLSTN3-202ENST00000331148 FAM216BQ8N7L0 139 aa14.4□□□□□ -0.1
CLSTN3-202ENST00000331148 TRGV9Q99603 122 aa14.4□□□□□ -0.1
CLSTN3-202ENST00000331148 A0A1B0GW15 77 aa14.4□□□□□ -0.1
CLSTN3-202ENST00000331148 GOSR1O95249 250 aa14.4□□□□□ -0.1
CLSTN3-202ENST00000331148 FAM169BQ8N8A8 192 aa14.4□□□□□ -0.1
CLSTN3-202ENST00000331148 DEFB108BQ8NET1 73 aa14.4□□□□□ -0.1
CLSTN3-202ENST00000331148 TNFRSF14Q92956 283 aa14.4□□□□□ -0.1
CLSTN3-202ENST00000331148 CCL13Q99616 98 aa14.4□□□□□ -0.1
CLSTN3-202ENST00000331148 SLC25A15Q9Y619 301 aa14.4□□□□□ -0.1
CLSTN3-202ENST00000331148 BSNQ9UPA5 3926 aa14.4□□□□□ -0.1
CLSTN3-202ENST00000331148 HOXB4P17483 251 aaPredicted RBP14.39□□□□□ -0.11
CLSTN3-202ENST00000331148 MEF2CQ06413 473 aaPredicted RBP14.39□□□□□ -0.11
CLSTN3-202ENST00000331148 OR10X1Q8NGY0 326 aa14.39□□□□□ -0.11
CLSTN3-202ENST00000331148 SIGLEC8Q9NYZ4 499 aa14.39□□□□□ -0.11
CLSTN3-202ENST00000331148 ZGRF1Q86YA3 2104 aa14.39□□□□□ -0.11
CLSTN3-202ENST00000331148 CRYGCP07315 174 aa14.39□□□□□ -0.11
CLSTN3-202ENST00000331148 MAP1BP46821 2468 aaKnown RBP14.39□□□□□ -0.11
CLSTN3-202ENST00000331148 TIMM23BQ5SRD1 257 aa14.39□□□□□ -0.11
CLSTN3-202ENST00000331148 PRSS57Q6UWY2 283 aa14.39□□□□□ -0.11
CLSTN3-202ENST00000331148 PCP2Q8IVA1 136 aa14.39□□□□□ -0.11
CLSTN3-202ENST00000331148 IGF2RP11717 2491 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms