RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 CCL8P80075 99 aa6.34□□□□□ -1.39
VMA21-201ENST00000330374 FAM231DQ6ZW35 169 aa6.34□□□□□ -1.39
VMA21-201ENST00000330374 C19orf24Q9BVV8 132 aa6.34□□□□□ -1.39
VMA21-201ENST00000330374 ARRDC1-AS1Q9H2J1 176 aa6.34□□□□□ -1.39
VMA21-201ENST00000330374 EDN2P20800 178 aa6.34□□□□□ -1.39
VMA21-201ENST00000330374 DLX1P56177 255 aa6.34□□□□□ -1.39
VMA21-201ENST00000330374 GOLT1AQ6ZVE7 132 aa6.34□□□□□ -1.39
VMA21-201ENST00000330374 BHLHA15Q7RTS1 189 aaPredicted RBP6.34□□□□□ -1.39
VMA21-201ENST00000330374 BPIFA4PQ86YQ2 179 aa6.34□□□□□ -1.39
VMA21-201ENST00000330374 EXOC3-AS1Q8N2X6 119 aa6.34□□□□□ -1.39
VMA21-201ENST00000330374 TMEM178AQ8NBL3 297 aa6.34□□□□□ -1.39
VMA21-201ENST00000330374 A0A1B0GXF2 115 aa6.34□□□□□ -1.4
VMA21-201ENST00000330374 PSMB11A5LHX3 300 aa6.34□□□□□ -1.4
VMA21-201ENST00000330374 FAM231BA6NCW3 169 aa6.34□□□□□ -1.4
VMA21-201ENST00000330374 HLA-DRB1P01911 266 aa6.34□□□□□ -1.4
VMA21-201ENST00000330374 OR5AL1P0C617 328 aa6.34□□□□□ -1.4
VMA21-201ENST00000330374 RASL11AQ6T310 242 aa6.34□□□□□ -1.4
VMA21-201ENST00000330374 OR10X1Q8NGY0 326 aa6.34□□□□□ -1.4
VMA21-201ENST00000330374 PRSS3P2Q8NHM4 247 aa6.34□□□□□ -1.4
VMA21-201ENST00000330374 DSCAML1Q8TD84 2053 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.33□□□□□ -1.4
VMA21-201ENST00000330374 TCRBV4S1A1TA0A5B7 111 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 B5MCH6 92 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 H3BUT2 72 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 SRSF12Q8WXF0 261 aaKnown RBP6.33□□□□□ -1.4
VMA21-201ENST00000330374 CFHR4Q92496 578 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 ZPBPQ9BS86 351 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 SCRT2Q9NQ03 307 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 K7EQM0 130 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 LIPFP07098 398 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 FAM106CPP0CH98 169 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 LYZP61626 148 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 NHLH1Q02575 133 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 FAM106AQ4KMX7 169 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 PRSS57Q6UWY2 283 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 Q9H3A6 140 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 F11RQ9Y624 299 aaKnown RBP6.33□□□□□ -1.4
VMA21-201ENST00000330374 TECTAO75443 2155 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 ADARB2-AS1A8MUL3 147 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 K7ERU9 68 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 TNFAIP6P98066 277 aaPredicted RBP6.33□□□□□ -1.4
VMA21-201ENST00000330374 RBPMS2Q6ZRY4 209 aaKnown RBP6.33□□□□□ -1.4
VMA21-201ENST00000330374 NDUFA4L2Q9NRX3 87 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 IGKV1D-37A0A075B6S9 117 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 TEX22C9J3V5 150 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 CGB3P0DN86 165 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 CGB7P0DN87 165 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 RHOGP84095 191 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 FA2HQ7L5A8 372 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 RITA1Q96K30 269 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 ZNF714Q96N38 554 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 SCNM1Q9BWG6 230 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 RNF7Q9UBF6 113 aa6.33□□□□□ -1.4
VMA21-201ENST00000330374 FNDC10F2Z333 226 aa6.32□□□□□ -1.4
VMA21-201ENST00000330374 ARMS2P0C7Q2 107 aa6.32□□□□□ -1.4
VMA21-201ENST00000330374 TNFRSF1AP19438 455 aa6.32□□□□□ -1.4
VMA21-201ENST00000330374 ATP5L2Q7Z4Y8 100 aa6.32□□□□□ -1.4
VMA21-201ENST00000330374 C7orf69Q9H7B7 122 aa6.32□□□□□ -1.4
VMA21-201ENST00000330374 PEF1Q9UBV8 284 aaKnown RBP6.32□□□□□ -1.4
VMA21-201ENST00000330374 PROCRQ9UNN8 238 aa6.32□□□□□ -1.4
VMA21-201ENST00000330374 FBLL1A6NHQ2 334 aaKnown RBP6.32□□□□□ -1.4
VMA21-201ENST00000330374 NKX2-8O15522 239 aa6.32□□□□□ -1.4
VMA21-201ENST00000330374 HIST1H1AQ02539 215 aaPredicted RBP6.32□□□□□ -1.4
VMA21-201ENST00000330374 PERPQ96FX8 193 aa6.32□□□□□ -1.4
VMA21-201ENST00000330374 GAFA1Q96PS6 74 aa6.32□□□□□ -1.4
VMA21-201ENST00000330374 PPBPP02775 128 aa6.32□□□□□ -1.4
VMA21-201ENST00000330374 GUSBP1Q15486 140 aa6.32□□□□□ -1.4
VMA21-201ENST00000330374 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.32□□□□□ -1.4
VMA21-201ENST00000330374 CACNG8Q8WXS5 425 aa6.32□□□□□ -1.4
VMA21-201ENST00000330374 CHCHD1Q96BP2 118 aaKnown RBP6.32□□□□□ -1.4
VMA21-201ENST00000330374 SPRY4Q9C004 299 aa6.32□□□□□ -1.4
VMA21-201ENST00000330374 THYN1Q9P016 225 aa6.32□□□□□ -1.4
VMA21-201ENST00000330374 RPUSD1Q9UJJ7 312 aaKnown RBP6.32□□□□□ -1.4
VMA21-201ENST00000330374 HSPB8Q9UJY1 196 aa6.32□□□□□ -1.4
VMA21-201ENST00000330374 X6R8D5 127 aa6.32□□□□□ -1.4
VMA21-201ENST00000330374 NBASA2RRP1 2371 aa6.31□□□□□ -1.4
VMA21-201ENST00000330374 ZZEF1O43149 2961 aa6.31□□□□□ -1.4
VMA21-201ENST00000330374 CD5LO43866 347 aa6.31□□□□□ -1.4
VMA21-201ENST00000330374 WT1P19544 449 aaPredicted RBP6.31□□□□□ -1.4
VMA21-201ENST00000330374 LOXL1Q08397 574 aaPredicted RBP6.31□□□□□ -1.4
VMA21-201ENST00000330374 TMEM97Q5BJF2 176 aa6.31□□□□□ -1.4
VMA21-201ENST00000330374 FAM162BQ5T6X4 162 aa6.31□□□□□ -1.4
VMA21-201ENST00000330374 SLC25A48Q6ZT89 311 aaKnown RBP6.31□□□□□ -1.4
VMA21-201ENST00000330374 TCRAP04437 139 aa6.31□□□□□ -1.4
VMA21-201ENST00000330374 CFHR2P36980 270 aa6.31□□□□□ -1.4
VMA21-201ENST00000330374 NMUP48645 174 aa6.31□□□□□ -1.4
VMA21-201ENST00000330374 SUB1P53999 127 aaKnown RBP eCLIP6.31□□□□□ -1.4
VMA21-201ENST00000330374 CSTL1Q9H114 145 aa6.31□□□□□ -1.4
VMA21-201ENST00000330374 ABCA4P78363 2273 aa6.31□□□□□ -1.4
VMA21-201ENST00000330374 POU2AF1Q16633 256 aa6.31□□□□□ -1.4
VMA21-201ENST00000330374 RPRMLQ8N4K4 120 aa6.31□□□□□ -1.4
VMA21-201ENST00000330374 S4R3C0 116 aa6.31□□□□□ -1.4
VMA21-201ENST00000330374 RAI1Q7Z5J4 1906 aaPredicted RBP6.31□□□□□ -1.4
VMA21-201ENST00000330374 A0A1W2PPI3 338 aa6.31□□□□□ -1.4
VMA21-201ENST00000330374 CGB1A6NKQ9 187 aa6.31□□□□□ -1.4
VMA21-201ENST00000330374 IFI27P40305 119 aaPredicted RBP6.31□□□□□ -1.4
VMA21-201ENST00000330374 CR1LQ2VPA4 569 aa6.31□□□□□ -1.4
VMA21-201ENST00000330374 FDCSPQ8NFU4 85 aa6.31□□□□□ -1.4
VMA21-201ENST00000330374 MALRD1Q5VYJ5 2156 aa6.31□□□□□ -1.4
VMA21-201ENST00000330374 RBP4P02753 201 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms