RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 CBX5P45973 191 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 LGALS7P47929 136 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 RBP2P50120 134 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 ZNF83P51522 516 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 CLDN12P56749 244 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 GNG3P63215 75 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 MRPS15P82914 257 aaKnown RBP1.91□□□□□ -2.1
SKP1-201ENST00000328392 FAM3AP98173 230 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 RSU1Q15404 277 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 OR8B8Q15620 311 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 CEACAM21Q3KPI0 293 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 Q3ZCU0 254 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 TIMM23BQ5SRD1 257 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 ELP2Q6IA86 826 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 CLEC18BQ6UXF7 455 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 LYPD6Q86Y78 171 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 SNX29P2Q8IUI4 249 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 Q8IYB0 196 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 GATD1Q8NB37 220 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 SLC30A7Q8NEW0 376 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 PXT1Q8NFP0 134 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 OR5A2Q8NGI9 324 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 OR51A2Q8NGJ7 313 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 OR5H6Q8NGV6 325 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 TNFAIP8L1Q8WVP5 186 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 SLC7A6Q92536 515 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 BORCS8Q96FH0 119 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 FAM210AQ96ND0 272 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 SLC25A21Q9BQT8 299 aaPredicted RBP1.91□□□□□ -2.1
SKP1-201ENST00000328392 TM2D3Q9BRN9 247 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 BCL2L14Q9BZR8 327 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 METTL9Q9H1A3 318 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 ATG5Q9H1Y0 275 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 SPACA1Q9HBV2 294 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 SCP2D1Q9UJQ7 156 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 CARHSP1Q9Y2V2 147 aaKnown RBP1.91□□□□□ -2.1
SKP1-201ENST00000328392 MPC1Q9Y5U8 109 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 KIAA2026Q5HYC2 2103 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 CELSR3Q9NYQ7 3312 aa1.91□□□□□ -2.1
SKP1-201ENST00000328392 FREM2Q5SZK8 3169 aa1.9□□□□□ -2.1
SKP1-201ENST00000328392 AKAP6Q13023 2319 aa1.9□□□□□ -2.1
SKP1-201ENST00000328392 DMDP11532 3685 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 PKD1L2Q7Z442 2459 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 DMXL2Q8TDJ6 3036 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 TRAV8-3A0A0A6YYJ7 113 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 PIGBOS1A0A0B4J2F0 54 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 IGKV1-9A0A0C4DH69 117 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 PQLC2LA1A4F0 135 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 FUOMA2VDF0 154 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 A6NIN4 97 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 TMEM210A6NLX4 147 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 TMEM14DPA8MWL7 114 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 A8MWP4 228 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 LEUTXA8MZ59 168 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 ZNF736B4DX44 427 aaPredicted RBP1.9□□□□□ -2.11
SKP1-201ENST00000328392 EEF1E1-BLOC1S5C9J1V9 151 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 TRAPPC2LH3BP13 241 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 H3BSH0 61 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 PLA2G10O15496 165 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 KRTAP5-8O75690 187 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 CRTAPO75718 401 aaPredicted RBP1.9□□□□□ -2.11
SKP1-201ENST00000328392 LYZL6O75951 148 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 IFNA6P05013 189 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 AKAIN1P0CW23 69 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 HIST1H1DP16402 221 aaKnown RBP1.9□□□□□ -2.11
SKP1-201ENST00000328392 BLVRBP30043 206 aaPredicted RBP1.9□□□□□ -2.11
SKP1-201ENST00000328392 IDH3GP51553 393 aaPredicted RBP1.9□□□□□ -2.11
SKP1-201ENST00000328392 TAS2R20P59543 309 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 GNG2P59768 71 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 QRFPP83859 136 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 CDK10Q15131 360 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 AMMECR1LQ6DCA0 310 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 GLIPR1L1Q6UWM5 242 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 NAA40Q86UY6 237 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 DOLPP1Q86YN1 238 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 OR5AS1Q8N127 324 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 EIF4E3Q8N5X7 224 aaKnown RBP1.9□□□□□ -2.11
SKP1-201ENST00000328392 TMEM229BQ8NBD8 167 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 ST6GALNAC3Q8NDV1 305 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 OR51T1Q8NGJ9 327 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 MUC7Q8TAX7 377 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 AQP3Q92482 292 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 PRRT1Q99946 306 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 RTL8AQ9BWD3 113 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 CHST6Q9GZX3 395 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 ALX4Q9H161 411 aaPredicted RBP1.9□□□□□ -2.11
SKP1-201ENST00000328392 PLEKHJ1Q9NW61 149 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 ZNF586Q9NXT0 402 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 GLS2Q9UI32 602 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 FAM215AQ9Y5M1 114 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 NUBP2Q9Y5Y2 271 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 SPG11Q96JI7 2443 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 LOC400499M0QZD8 3231 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 USF3Q68DE3 2245 aa1.9□□□□□ -2.11
SKP1-201ENST00000328392 WNK2Q9Y3S1 2297 aa1.89□□□□□ -2.11
SKP1-201ENST00000328392 FAM208BQ5VWN6 2430 aa1.89□□□□□ -2.11
SKP1-201ENST00000328392 DOCK11Q5JSL3 2073 aa1.89□□□□□ -2.11
SKP1-201ENST00000328392 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.89□□□□□ -2.113e-6■□□□□ 10.9
SKP1-201ENST00000328392 MED13LQ71F56 2210 aa1.89□□□□□ -2.11
SKP1-201ENST00000328392 IGHV3-21A0A0B4J1V1 117 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms