RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 HIST1H2BCP62807 126 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 HIST2H2BEQ16778 126 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.22□□□□□ -0.93
COL4A5-201ENST00000328300 HIST1H2BHQ93079 126 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 HIST1H2BNQ99877 126 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 HIST1H2BMQ99879 126 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 PRADC1Q9BSG0 188 aa9.21□□□□□ -0.93
COL4A5-201ENST00000328300 SVILO95425 2214 aa9.21□□□□□ -0.93
COL4A5-201ENST00000328300 FREM3P0C091 2139 aa9.21□□□□□ -0.93
COL4A5-201ENST00000328300 KIF26BQ2KJY2 2108 aa9.21□□□□□ -0.93
COL4A5-201ENST00000328300 TMEM262E9PQX1 116 aa9.21□□□□□ -0.93
COL4A5-201ENST00000328300 IGHV2-5P01817 119 aa9.21□□□□□ -0.93
COL4A5-201ENST00000328300 TMEM75Q8N9X5 138 aa9.21□□□□□ -0.93
COL4A5-201ENST00000328300 NUDT10Q8NFP7 164 aa9.21□□□□□ -0.93
COL4A5-201ENST00000328300 NUDT11Q96G61 164 aa9.21□□□□□ -0.93
COL4A5-201ENST00000328300 RNASE7Q9H1E1 156 aaKnown RBP9.21□□□□□ -0.93
COL4A5-201ENST00000328300 NSUN5P1Q3KNT7 163 aa9.21□□□□□ -0.94
COL4A5-201ENST00000328300 C5orf30Q96GV9 206 aa9.21□□□□□ -0.94
COL4A5-201ENST00000328300 RHPN1-AS1Q9BWJ2 59 aa9.21□□□□□ -0.94
COL4A5-201ENST00000328300 VCX2Q9H322 139 aa9.21□□□□□ -0.94
COL4A5-201ENST00000328300 LINC01619G3V211 115 aa9.21□□□□□ -0.94
COL4A5-201ENST00000328300 IGKV1-16P04430 117 aa9.21□□□□□ -0.94
COL4A5-201ENST00000328300 PRB3Q04118 309 aaPredicted RBP9.21□□□□□ -0.94
COL4A5-201ENST00000328300 SEPSECSQ9HD40 501 aaKnown RBP9.21□□□□□ -0.94
COL4A5-201ENST00000328300 TRAV5A0A0B4J249 113 aa9.21□□□□□ -0.94
COL4A5-201ENST00000328300 H3BUT2 72 aa9.2□□□□□ -0.94
COL4A5-201ENST00000328300 DNAL4O96015 105 aa9.2□□□□□ -0.94
COL4A5-201ENST00000328300 FBLN7Q53RD9 439 aa9.2□□□□□ -0.94
COL4A5-201ENST00000328300 CT83Q5H943 113 aa9.2□□□□□ -0.94
COL4A5-201ENST00000328300 IGHV3OR16-8A0A075B7F1 116 aa9.2□□□□□ -0.94
COL4A5-201ENST00000328300 LHBP01229 141 aa9.2□□□□□ -0.94
COL4A5-201ENST00000328300 HS3ST6Q96QI5 342 aa9.2□□□□□ -0.94
COL4A5-201ENST00000328300 A0A0G2JRQ6 117 aa9.2□□□□□ -0.94
COL4A5-201ENST00000328300 WISP1O95388 367 aa9.2□□□□□ -0.94
COL4A5-201ENST00000328300 WT1P19544 449 aaPredicted RBP9.2□□□□□ -0.94
COL4A5-201ENST00000328300 KLHL30-AS1Q8NEE0 82 aa9.2□□□□□ -0.94
COL4A5-201ENST00000328300 OR11H6Q8NGC7 330 aa9.2□□□□□ -0.94
COL4A5-201ENST00000328300 Q96MF0 132 aa9.2□□□□□ -0.94
COL4A5-201ENST00000328300 PLXNB3Q9ULL4 1909 aa9.2□□□□□ -0.94
COL4A5-201ENST00000328300 ADMP35318 185 aa9.2□□□□□ -0.94
COL4A5-201ENST00000328300 TMEM170BQ5T4T1 132 aa9.2□□□□□ -0.94
COL4A5-201ENST00000328300 LINC01551Q86U37 167 aa9.2□□□□□ -0.94
COL4A5-201ENST00000328300 ZNF581Q9P0T4 197 aa9.2□□□□□ -0.94
COL4A5-201ENST00000328300 LCN12Q6JVE5 192 aa9.2□□□□□ -0.94
COL4A5-201ENST00000328300 Q6ZRM9 215 aa9.2□□□□□ -0.94
COL4A5-201ENST00000328300 ATP6V0E1O15342 81 aa9.19□□□□□ -0.94
COL4A5-201ENST00000328300 FOXC2Q99958 501 aa9.19□□□□□ -0.94
COL4A5-201ENST00000328300 SLC25A2Q9BXI2 301 aa9.19□□□□□ -0.94
COL4A5-201ENST00000328300 TRGV4A0A0C4DH28 118 aa9.19□□□□□ -0.94
COL4A5-201ENST00000328300 TDGF1P3P51864 188 aa9.19□□□□□ -0.94
COL4A5-201ENST00000328300 ZNF329Q86UD4 541 aa9.19□□□□□ -0.94
COL4A5-201ENST00000328300 THAP8Q8NA92 274 aa9.19□□□□□ -0.94
COL4A5-201ENST00000328300 REG4Q9BYZ8 158 aa9.19□□□□□ -0.94
COL4A5-201ENST00000328300 DPH3P1Q9H4G8 78 aa9.19□□□□□ -0.94
COL4A5-201ENST00000328300 ZNF106Q9H2Y7 1883 aaKnown RBP9.19□□□□□ -0.94
COL4A5-201ENST00000328300 CFAP161Q6P656 301 aa9.19□□□□□ -0.94
COL4A5-201ENST00000328300 PI4KAP42356 2102 aa9.18□□□□□ -0.94
COL4A5-201ENST00000328300 TYMSP04818 313 aa9.18□□□□□ -0.94
COL4A5-201ENST00000328300 RPL15P61313 204 aaKnown RBP9.18□□□□□ -0.94
COL4A5-201ENST00000328300 CR1LQ2VPA4 569 aa9.18□□□□□ -0.94
COL4A5-201ENST00000328300 ASXL3Q9C0F0 2248 aa9.18□□□□□ -0.94
COL4A5-201ENST00000328300 HIST1H2BLQ99880 126 aa9.18□□□□□ -0.94
COL4A5-201ENST00000328300 MEGF9Q9H1U4 602 aa9.18□□□□□ -0.94
COL4A5-201ENST00000328300 TRAV9-2A0A087WT02 112 aa9.18□□□□□ -0.94
COL4A5-201ENST00000328300 SEC11AP67812 179 aa9.18□□□□□ -0.94
COL4A5-201ENST00000328300 Q86TA4 180 aa9.18□□□□□ -0.94
COL4A5-201ENST00000328300 LINC00614P0C842 121 aa9.18□□□□□ -0.94
COL4A5-201ENST00000328300 CD33P20138 364 aa9.18□□□□□ -0.94
COL4A5-201ENST00000328300 MUC21Q5SSG8 566 aa9.18□□□□□ -0.94
COL4A5-201ENST00000328300 C11orf53Q8IXP5 236 aa9.17□□□□□ -0.94
COL4A5-201ENST00000328300 RCHY1Q96PM5 261 aa9.17□□□□□ -0.94
COL4A5-201ENST00000328300 FAM186AA6NE01 2351 aa9.17□□□□□ -0.94
COL4A5-201ENST00000328300 MRAP2Q96G30 205 aa9.17□□□□□ -0.94
COL4A5-201ENST00000328300 LINC00527Q9UJ94 153 aa9.17□□□□□ -0.94
COL4A5-201ENST00000328300 COLCA2A8K830 154 aa9.17□□□□□ -0.94
COL4A5-201ENST00000328300 LCNL1Q6ZST4 164 aa9.17□□□□□ -0.94
COL4A5-201ENST00000328300 HIST3H2BBQ8N257 126 aa9.17□□□□□ -0.94
COL4A5-201ENST00000328300 TMEM249Q2WGJ8 235 aa9.17□□□□□ -0.94
COL4A5-201ENST00000328300 ATP6V0BQ99437 205 aa9.17□□□□□ -0.94
COL4A5-201ENST00000328300 FNDC4Q9H6D8 234 aaPredicted RBP9.17□□□□□ -0.94
COL4A5-201ENST00000328300 PGPEP1LA6NFU8 196 aa9.17□□□□□ -0.94
COL4A5-201ENST00000328300 RHODO00212 210 aa9.17□□□□□ -0.94
COL4A5-201ENST00000328300 LY6HO94772 140 aa9.16□□□□□ -0.94
COL4A5-201ENST00000328300 APOMO95445 188 aa9.16□□□□□ -0.94
COL4A5-201ENST00000328300 RPL36AP83881 106 aaKnown RBP9.16□□□□□ -0.94
COL4A5-201ENST00000328300 RPL36ALQ969Q0 106 aaKnown RBP9.16□□□□□ -0.94
COL4A5-201ENST00000328300 IGKV2-40A0A087WW87 121 aaPredicted RBP9.16□□□□□ -0.94
COL4A5-201ENST00000328300 IGKV2D-40P01614 121 aaPredicted RBP9.16□□□□□ -0.94
COL4A5-201ENST00000328300 SH2D1AO60880 128 aa9.16□□□□□ -0.94
COL4A5-201ENST00000328300 OR5A1Q8NGJ0 315 aa9.16□□□□□ -0.94
COL4A5-201ENST00000328300 MRPL27Q9P0M9 148 aaKnown RBP9.16□□□□□ -0.94
COL4A5-201ENST00000328300 LHFPL4Q7Z7J7 247 aa9.16□□□□□ -0.94
COL4A5-201ENST00000328300 C2orf16Q68DN1 1984 aa9.16□□□□□ -0.94
COL4A5-201ENST00000328300 DPM2O94777 84 aa9.16□□□□□ -0.94
COL4A5-201ENST00000328300 RUSC1-AS1Q66K80 236 aa9.16□□□□□ -0.94
COL4A5-201ENST00000328300 A0A1B0GUS0 222 aa9.15□□□□□ -0.94
COL4A5-201ENST00000328300 H3BRN7 92 aa9.15□□□□□ -0.94
COL4A5-201ENST00000328300 DEFB113Q30KQ7 82 aa9.15□□□□□ -0.94
COL4A5-201ENST00000328300 ZNF114Q8NC26 417 aa9.15□□□□□ -0.94
COL4A5-201ENST00000328300 LAGE3Q14657 143 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms