RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 SLC25A39Q9BZJ4 359 aaPredicted RBP11.66□□□□□ -0.54
SSBP3-201ENST00000326956 CST9LQ9H4G1 147 aa11.66□□□□□ -0.54
SSBP3-201ENST00000326956 PEF1Q9UBV8 284 aaKnown RBP11.66□□□□□ -0.54
SSBP3-201ENST00000326956 ARMS2P0C7Q2 107 aa11.66□□□□□ -0.54
SSBP3-201ENST00000326956 NUP37Q8NFH4 326 aa11.66□□□□□ -0.54
SSBP3-201ENST00000326956 TMEM178BH3BS89 294 aa11.65□□□□□ -0.54
SSBP3-201ENST00000326956 M0R296 226 aa11.65□□□□□ -0.54
SSBP3-201ENST00000326956 SNAI2O43623 268 aa11.65□□□□□ -0.54
SSBP3-201ENST00000326956 PLP1P60201 277 aa11.65□□□□□ -0.54
SSBP3-201ENST00000326956 RPS20P60866 119 aaKnown RBP11.65□□□□□ -0.54
SSBP3-201ENST00000326956 PLGLAQ15195 96 aa11.65□□□□□ -0.54
SSBP3-201ENST00000326956 ASCL5Q7RTU5 278 aa11.65□□□□□ -0.54
SSBP3-201ENST00000326956 C8orf31Q8N9H6 132 aa11.65□□□□□ -0.54
SSBP3-201ENST00000326956 NEU4Q8WWR8 484 aaPredicted RBP11.65□□□□□ -0.54
SSBP3-201ENST00000326956 VSTM5A8MXK1 200 aa11.65□□□□□ -0.54
SSBP3-201ENST00000326956 LINC01545Q5VT33 79 aa11.65□□□□□ -0.54
SSBP3-201ENST00000326956 SERTM2A0A1B0GWG4 89 aa11.64□□□□□ -0.55
SSBP3-201ENST00000326956 PSG9Q00887 426 aa11.64□□□□□ -0.55
SSBP3-201ENST00000326956 OR8A1Q8NGG7 326 aa11.64□□□□□ -0.55
SSBP3-201ENST00000326956 SCNM1Q9BWG6 230 aa11.64□□□□□ -0.55
SSBP3-201ENST00000326956 F11RQ9Y624 299 aaKnown RBP11.64□□□□□ -0.55
SSBP3-201ENST00000326956 CT45A10P0DMU9 189 aa11.64□□□□□ -0.55
SSBP3-201ENST00000326956 COX8AP10176 69 aa11.64□□□□□ -0.55
SSBP3-201ENST00000326956 CNTFRP26992 372 aa11.64□□□□□ -0.55
SSBP3-201ENST00000326956 ADIPOQQ15848 244 aa11.64□□□□□ -0.55
SSBP3-201ENST00000326956 OCIAD2Q56VL3 154 aa11.64□□□□□ -0.55
SSBP3-201ENST00000326956 SMIM15Q7Z3B0 74 aa11.64□□□□□ -0.55
SSBP3-201ENST00000326956 INSIG2Q9Y5U4 225 aa11.64□□□□□ -0.55
SSBP3-201ENST00000326956 CNOT1A5YKK6 2376 aaKnown RBP11.63□□□□□ -0.55
SSBP3-201ENST00000326956 A0A1B0GW15 77 aa11.63□□□□□ -0.55
SSBP3-201ENST00000326956 IGHV1-8P0DP01 117 aa11.63□□□□□ -0.55
SSBP3-201ENST00000326956 NHLH1Q02575 133 aa11.63□□□□□ -0.55
SSBP3-201ENST00000326956 DEFB123Q8N688 67 aa11.63□□□□□ -0.55
SSBP3-201ENST00000326956 ZNF747Q9BV97 191 aa11.63□□□□□ -0.55
SSBP3-201ENST00000326956 TMEM14CQ9P0S9 112 aa11.63□□□□□ -0.55
SSBP3-201ENST00000326956 SIGLEC9Q9Y336 463 aa11.63□□□□□ -0.55
SSBP3-201ENST00000326956 ZC2HC1AQ96GY0 325 aa11.63□□□□□ -0.55
SSBP3-201ENST00000326956 C7orf71A4D174 169 aa11.63□□□□□ -0.55
SSBP3-201ENST00000326956 K7ERU9 68 aa11.63□□□□□ -0.55
SSBP3-201ENST00000326956 LOXP28300 417 aaPredicted RBP11.63□□□□□ -0.55
SSBP3-201ENST00000326956 PPP1R27Q86WC6 154 aa11.63□□□□□ -0.55
SSBP3-201ENST00000326956 TMEM133Q9H2Q1 129 aa11.63□□□□□ -0.55
SSBP3-201ENST00000326956 DYNLRB1Q9NP97 96 aa11.63□□□□□ -0.55
SSBP3-201ENST00000326956 LOC389332A0A1B0GUA5 103 aa11.62□□□□□ -0.55
SSBP3-201ENST00000326956 FCN3O75636 299 aa11.62□□□□□ -0.55
SSBP3-201ENST00000326956 IGLC1P0CG04 106 aa11.62□□□□□ -0.55
SSBP3-201ENST00000326956 NGBQ9NPG2 151 aa11.62□□□□□ -0.55
SSBP3-201ENST00000326956 PSG8Q9UQ74 426 aa11.62□□□□□ -0.55
SSBP3-201ENST00000326956 C16orf97H3BN30 126 aa11.62□□□□□ -0.55
SSBP3-201ENST00000326956 TMEM97Q5BJF2 176 aa11.62□□□□□ -0.55
SSBP3-201ENST00000326956 DEFB124Q8NES8 71 aa11.62□□□□□ -0.55
SSBP3-201ENST00000326956 ASCL2Q99929 193 aa11.62□□□□□ -0.55
SSBP3-201ENST00000326956 SPAARA0A1B0GVQ0 90 aa11.61□□□□□ -0.55
SSBP3-201ENST00000326956 GAGE12BA1L429 117 aa11.61□□□□□ -0.55
SSBP3-201ENST00000326956 GAGE10A6NGK3 116 aa11.61□□□□□ -0.55
SSBP3-201ENST00000326956 CNIH1O95406 144 aa11.61□□□□□ -0.55
SSBP3-201ENST00000326956 IGLV2-11P01706 119 aa11.61□□□□□ -0.55
SSBP3-201ENST00000326956 PRB4P10163 310 aaPredicted RBP11.61□□□□□ -0.55
SSBP3-201ENST00000326956 UQCRFS1P47985 274 aa11.61□□□□□ -0.55
SSBP3-201ENST00000326956 SEC11AP67812 179 aa11.61□□□□□ -0.55
SSBP3-201ENST00000326956 MRGPRG-AS1Q2M3A8 158 aa11.61□□□□□ -0.55
SSBP3-201ENST00000326956 TMEM155Q4W5P6 130 aa11.61□□□□□ -0.55
SSBP3-201ENST00000326956 Q6AWC8 147 aa11.61□□□□□ -0.55
SSBP3-201ENST00000326956 FBXL15Q9H469 300 aa11.61□□□□□ -0.55
SSBP3-201ENST00000326956 CTSZQ9UBR2 303 aa11.61□□□□□ -0.55
SSBP3-201ENST00000326956 PPBPP02775 128 aa11.61□□□□□ -0.55
SSBP3-201ENST00000326956 BSPH1Q075Z2 132 aa11.61□□□□□ -0.55
SSBP3-201ENST00000326956 PVRIGQ6DKI7 326 aa11.61□□□□□ -0.55
SSBP3-201ENST00000326956 TRAV8-6A0A0B4J262 113 aa11.6□□□□□ -0.55
SSBP3-201ENST00000326956 FTH1P19P0C7X4 201 aa11.6□□□□□ -0.55
SSBP3-201ENST00000326956 TMEM75Q8N9X5 138 aa11.6□□□□□ -0.55
SSBP3-201ENST00000326956 PCNX1Q96RV3 2341 aa11.6□□□□□ -0.55
SSBP3-201ENST00000326956 EP300Q09472 2414 aaPredicted RBP11.6□□□□□ -0.55
SSBP3-201ENST00000326956 TRBV19A0A075B6N1 114 aa11.6□□□□□ -0.55
SSBP3-201ENST00000326956 PRB3Q04118 309 aaPredicted RBP11.6□□□□□ -0.55
SSBP3-201ENST00000326956 RBPJQ06330 500 aa11.6□□□□□ -0.55
SSBP3-201ENST00000326956 Q71RC1 249 aaPredicted RBP11.6□□□□□ -0.55
SSBP3-201ENST00000326956 MALRD1Q5VYJ5 2156 aa11.6□□□□□ -0.55
SSBP3-201ENST00000326956 TMSB15BA0A087X1C1 80 aa11.59□□□□□ -0.55
SSBP3-201ENST00000326956 A6NDN8 102 aa11.59□□□□□ -0.55
SSBP3-201ENST00000326956 IFI27P40305 119 aaPredicted RBP11.59□□□□□ -0.55
SSBP3-201ENST00000326956 TRBV6-1A0A0K0K1D8 114 aa11.59□□□□□ -0.55
SSBP3-201ENST00000326956 PSG3Q16557 428 aa11.59□□□□□ -0.55
SSBP3-201ENST00000326956 C1orf122Q6ZSJ8 110 aa11.59□□□□□ -0.55
SSBP3-201ENST00000326956 GTF2H5Q6ZYL4 71 aa11.59□□□□□ -0.55
SSBP3-201ENST00000326956 RPEQ96AT9 228 aa11.59□□□□□ -0.55
SSBP3-201ENST00000326956 C17orf77Q96MU5 243 aa11.59□□□□□ -0.55
SSBP3-201ENST00000326956 NCR2O95944 276 aa11.59□□□□□ -0.55
SSBP3-201ENST00000326956 DLX6P56179 175 aa11.59□□□□□ -0.55
SSBP3-201ENST00000326956 PRELID3AQ96N28 172 aa11.59□□□□□ -0.55
SSBP3-201ENST00000326956 SHANK2-AS3Q9BTD1 123 aa11.59□□□□□ -0.55
SSBP3-201ENST00000326956 AAMDCQ9H7C9 122 aa11.59□□□□□ -0.55
SSBP3-201ENST00000326956 LOC400499M0QZD8 3231 aa11.59□□□□□ -0.55
SSBP3-201ENST00000326956 IGHV1-3A0A0C4DH29 117 aa11.58□□□□□ -0.56
SSBP3-201ENST00000326956 DLX1P56177 255 aa11.58□□□□□ -0.56
SSBP3-201ENST00000326956 TMEM190Q8WZ59 177 aa11.58□□□□□ -0.56
SSBP3-201ENST00000326956 TNFRSF14Q92956 283 aa11.58□□□□□ -0.56
SSBP3-201ENST00000326956 TMEM189A5PLL7 270 aa11.58□□□□□ -0.56
SSBP3-201ENST00000326956 TEX22C9J3V5 150 aa11.58□□□□□ -0.56
SSBP3-201ENST00000326956 D6R8Y8 96 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms