RNA–Protein interactions for RNA: ENST00000323055.10

PPP3CA-201, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-201ENST00000323055 CBY3A6NI87 242 aa13.7□□□□□ -0.22
PPP3CA-201ENST00000323055 TEX29Q8N6K0 151 aa13.7□□□□□ -0.22
PPP3CA-201ENST00000323055 PRSS22Q9GZN4 317 aa13.7□□□□□ -0.22
PPP3CA-201ENST00000323055 ZFP30Q9Y2G7 519 aa13.7□□□□□ -0.22
PPP3CA-201ENST00000323055 FBLN7Q53RD9 439 aa13.69□□□□□ -0.22
PPP3CA-201ENST00000323055 Q8TAT8 98 aa13.69□□□□□ -0.22
PPP3CA-201ENST00000323055 G3V318 75 aa13.69□□□□□ -0.22
PPP3CA-201ENST00000323055 NUDT3O95989 172 aa13.69□□□□□ -0.22
PPP3CA-201ENST00000323055 GSN-AS1Q9NRJ2 163 aa13.69□□□□□ -0.22
PPP3CA-201ENST00000323055 PLA2G2EQ9NZK7 142 aa13.69□□□□□ -0.22
PPP3CA-201ENST00000323055 DMRT1Q9Y5R6 373 aa13.69□□□□□ -0.22
PPP3CA-201ENST00000323055 PMCHL1Q16048 86 aa13.69□□□□□ -0.22
PPP3CA-201ENST00000323055 RNF151Q2KHN1 245 aa13.69□□□□□ -0.22
PPP3CA-201ENST00000323055 HIST1H2BLQ99880 126 aa13.69□□□□□ -0.22
PPP3CA-201ENST00000323055 USP9XQ93008 2570 aaPredicted RBP13.69□□□□□ -0.22
PPP3CA-201ENST00000323055 OR4C46A6NHA9 309 aa13.68□□□□□ -0.22
PPP3CA-201ENST00000323055 FNDC10F2Z333 226 aa13.68□□□□□ -0.22
PPP3CA-201ENST00000323055 UBE2CO00762 179 aa13.68□□□□□ -0.22
PPP3CA-201ENST00000323055 TSKUQ8WUA8 353 aa13.68□□□□□ -0.22
PPP3CA-201ENST00000323055 SLC50A1Q9BRV3 221 aa13.68□□□□□ -0.22
PPP3CA-201ENST00000323055 ZFYVE26Q68DK2 2539 aa13.68□□□□□ -0.22
PPP3CA-201ENST00000323055 RNASE4P34096 147 aaKnown RBP13.68□□□□□ -0.22
PPP3CA-201ENST00000323055 FOXL1Q12952 345 aa13.68□□□□□ -0.22
PPP3CA-201ENST00000323055 HINT1P49773 126 aaPredicted RBP13.68□□□□□ -0.22
PPP3CA-201ENST00000323055 FAM209BQ5JX69 171 aa13.68□□□□□ -0.22
PPP3CA-201ENST00000323055 NUP210LQ5VU65 1888 aa13.68□□□□□ -0.22
PPP3CA-201ENST00000323055 SETD2Q9BYW2 2564 aaPredicted RBP13.67□□□□□ -0.22
PPP3CA-201ENST00000323055 ATP6V0E1O15342 81 aa13.67□□□□□ -0.22
PPP3CA-201ENST00000323055 NDUFB8O95169 186 aa13.67□□□□□ -0.22
PPP3CA-201ENST00000323055 UBE2E1P51965 193 aa13.67□□□□□ -0.22
PPP3CA-201ENST00000323055 ZNF502Q8TBZ5 544 aa13.67□□□□□ -0.22
PPP3CA-201ENST00000323055 TSPOP30536 169 aa13.67□□□□□ -0.22
PPP3CA-201ENST00000323055 C5orf30Q96GV9 206 aa13.67□□□□□ -0.22
PPP3CA-201ENST00000323055 NRN1Q9NPD7 142 aa13.67□□□□□ -0.22
PPP3CA-201ENST00000323055 A0A0C4DFX4 3053 aa13.67□□□□□ -0.22
PPP3CA-201ENST00000323055 ZNF25P17030 456 aaPredicted RBP13.66□□□□□ -0.22
PPP3CA-201ENST00000323055 ZNF56Q15929 161 aa13.66□□□□□ -0.22
PPP3CA-201ENST00000323055 HIST3H2BBQ8N257 126 aa13.66□□□□□ -0.22
PPP3CA-201ENST00000323055 TMEM256Q8N2U0 113 aa13.66□□□□□ -0.22
PPP3CA-201ENST00000323055 SYT8Q8NBV8 401 aa13.66□□□□□ -0.22
PPP3CA-201ENST00000323055 OR4C5Q8NGB2 326 aa13.66□□□□□ -0.22
PPP3CA-201ENST00000323055 FNDC4Q9H6D8 234 aaPredicted RBP13.66□□□□□ -0.22
PPP3CA-201ENST00000323055 Q1RN00 199 aa13.66□□□□□ -0.22
PPP3CA-201ENST00000323055 SP5Q6BEB4 398 aaPredicted RBP13.66□□□□□ -0.22
PPP3CA-201ENST00000323055 OR4X2Q8NGF9 303 aa13.66□□□□□ -0.22
PPP3CA-201ENST00000323055 RAX2Q96IS3 184 aa13.66□□□□□ -0.22
PPP3CA-201ENST00000323055 TMEM70Q9BUB7 260 aa13.66□□□□□ -0.22
PPP3CA-201ENST00000323055 RNF223E7ERA6 249 aa13.65□□□□□ -0.22
PPP3CA-201ENST00000323055 IGLV2-14P01704 120 aa13.65□□□□□ -0.22
PPP3CA-201ENST00000323055 ADORA2A-AS1P86434 159 aa13.65□□□□□ -0.22
PPP3CA-201ENST00000323055 POU2AF1Q16633 256 aa13.65□□□□□ -0.22
PPP3CA-201ENST00000323055 ASIPP42127 132 aa13.65□□□□□ -0.22
PPP3CA-201ENST00000323055 GUSBP1Q15486 140 aa13.65□□□□□ -0.22
PPP3CA-201ENST00000323055 ITLN2Q8WWU7 325 aaPredicted RBP13.65□□□□□ -0.22
PPP3CA-201ENST00000323055 C14orf144Q96I85 54 aa13.65□□□□□ -0.22
PPP3CA-201ENST00000323055 PMCHL2Q9BQD1 86 aa13.65□□□□□ -0.22
PPP3CA-201ENST00000323055 IGHV2-70P01814 119 aa13.65□□□□□ -0.22
PPP3CA-201ENST00000323055 SOX21Q9Y651 276 aaPredicted RBP13.65□□□□□ -0.22
PPP3CA-201ENST00000323055 IGHV2-70DA0A0C4DH43 119 aa13.65□□□□□ -0.22
PPP3CA-201ENST00000323055 MSMBP08118 114 aa13.65□□□□□ -0.22
PPP3CA-201ENST00000323055 DSCR9P59020 149 aa13.65□□□□□ -0.22
PPP3CA-201ENST00000323055 GNB1LQ9BYB4 327 aa13.65□□□□□ -0.22
PPP3CA-201ENST00000323055 Q6AWC8 147 aa13.64□□□□□ -0.23
PPP3CA-201ENST00000323055 SIGLEC15Q6ZMC9 328 aa13.64□□□□□ -0.23
PPP3CA-201ENST00000323055 ORMDL3Q8N138 153 aa13.64□□□□□ -0.23
PPP3CA-201ENST00000323055 GGTLC3B5MD39 225 aa13.64□□□□□ -0.23
PPP3CA-201ENST00000323055 AMBPP02760 352 aa13.64□□□□□ -0.23
PPP3CA-201ENST00000323055 ZNF114Q8NC26 417 aa13.64□□□□□ -0.23
PPP3CA-201ENST00000323055 UQCR10Q9UDW1 63 aa13.64□□□□□ -0.23
PPP3CA-201ENST00000323055 LINC00587B1AMM8 73 aa13.64□□□□□ -0.23
PPP3CA-201ENST00000323055 NAV3Q8IVL0 2385 aa13.64□□□□□ -0.23
PPP3CA-201ENST00000323055 REC114Q7Z4M0 266 aa13.63□□□□□ -0.23
PPP3CA-201ENST00000323055 SSBP2P81877 361 aaPredicted RBP13.63□□□□□ -0.23
PPP3CA-201ENST00000323055 ST6GALNAC6Q969X2 333 aa13.63□□□□□ -0.23
PPP3CA-201ENST00000323055 SRSF9Q13242 221 aaKnown RBP eCLIP13.63□□□□□ -0.23
PPP3CA-201ENST00000323055 ASPHD1Q5U4P2 390 aa13.63□□□□□ -0.23
PPP3CA-201ENST00000323055 C2CD3Q4AC94 2353 aa13.63□□□□□ -0.23
PPP3CA-201ENST00000323055 C7orf71A4D174 169 aa13.63□□□□□ -0.23
PPP3CA-201ENST00000323055 TOMM40O96008 361 aa13.62□□□□□ -0.23
PPP3CA-201ENST00000323055 HIVEP2P31629 2446 aa13.62□□□□□ -0.23
PPP3CA-201ENST00000323055 CHD3Q12873 2000 aaKnown RBP13.62□□□□□ -0.23
PPP3CA-201ENST00000323055 PRB1P04280 392 aa13.62□□□□□ -0.23
PPP3CA-201ENST00000323055 UTF1Q5T230 341 aa13.62□□□□□ -0.23
PPP3CA-201ENST00000323055 NUP35Q8NFH5 326 aa13.62□□□□□ -0.23
PPP3CA-201ENST00000323055 SHANK2-AS3Q9BTD1 123 aa13.62□□□□□ -0.23
PPP3CA-201ENST00000323055 PRUNE2Q8WUY3 3088 aa13.62□□□□□ -0.23
PPP3CA-201ENST00000323055 SNAI2O43623 268 aa13.62□□□□□ -0.23
PPP3CA-201ENST00000323055 RITA1Q96K30 269 aa13.62□□□□□ -0.23
PPP3CA-201ENST00000323055 PFN1P07737 140 aaKnown RBP13.61□□□□□ -0.23
PPP3CA-201ENST00000323055 HERVK_113P61574 105 aa13.61□□□□□ -0.23
PPP3CA-201ENST00000323055 RPLP1P05386 114 aaKnown RBP13.61□□□□□ -0.23
PPP3CA-201ENST00000323055 SCGB1C2P0DMR2 95 aa13.61□□□□□ -0.23
PPP3CA-201ENST00000323055 C10orf91Q5T1B1 145 aa13.61□□□□□ -0.23
PPP3CA-201ENST00000323055 IGHV1-69DA0A0B4J2H0 117 aa13.61□□□□□ -0.23
PPP3CA-201ENST00000323055 IGHV1-69P01742 117 aa13.61□□□□□ -0.23
PPP3CA-201ENST00000323055 ZNF324O75467 553 aaPredicted RBP13.6□□□□□ -0.23
PPP3CA-201ENST00000323055 ZNF688P0C7X2 276 aa13.6□□□□□ -0.23
PPP3CA-201ENST00000323055 LCN12Q6JVE5 192 aa13.6□□□□□ -0.23
PPP3CA-201ENST00000323055 SLC25A34Q6PIV7 304 aa13.6□□□□□ -0.23
PPP3CA-201ENST00000323055 UNC80Q8N2C7 3258 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms