RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 UBE2E1P51965 193 aa8.12□□□□□ -1.11
COL12A1-201ENST00000322507 H3BMG7 143 aa8.11□□□□□ -1.11
COL12A1-201ENST00000322507 TMEM158Q8WZ71 300 aa8.11□□□□□ -1.11
COL12A1-201ENST00000322507 SIGLEC12Q96PQ1 595 aa8.11□□□□□ -1.11
COL12A1-201ENST00000322507 ZNF703Q9H7S9 590 aaPredicted RBP8.11□□□□□ -1.11
COL12A1-201ENST00000322507 DTX4Q9Y2E6 619 aa8.11□□□□□ -1.11
COL12A1-201ENST00000322507 PLXNA4Q9HCM2 1894 aa8.11□□□□□ -1.11
COL12A1-201ENST00000322507 A0A0B4J2C4 111 aa8.11□□□□□ -1.11
COL12A1-201ENST00000322507 FAM236DA0A1B0GTK5 79 aa8.11□□□□□ -1.11
COL12A1-201ENST00000322507 FAM236CP0DP71 79 aa8.11□□□□□ -1.11
COL12A1-201ENST00000322507 PDE6HQ13956 83 aa8.11□□□□□ -1.11
COL12A1-201ENST00000322507 SSC4DQ8WTU2 575 aa8.11□□□□□ -1.11
COL12A1-201ENST00000322507 ATP5J2P56134 94 aa8.11□□□□□ -1.11
COL12A1-201ENST00000322507 NDUFV3P56181 108 aaKnown RBP8.11□□□□□ -1.11
COL12A1-201ENST00000322507 IGKV3-7A0A075B6H7 116 aa8.11□□□□□ -1.11
COL12A1-201ENST00000322507 NKAPP1Q8N9T2 125 aa8.11□□□□□ -1.11
COL12A1-201ENST00000322507 GREM1O60565 184 aa8.11□□□□□ -1.11
COL12A1-201ENST00000322507 LINC01590Q5TEZ4 76 aa8.11□□□□□ -1.11
COL12A1-201ENST00000322507 LINC00271P0C7V0 271 aa8.11□□□□□ -1.11
COL12A1-201ENST00000322507 PRSS12P56730 875 aa8.11□□□□□ -1.11
COL12A1-201ENST00000322507 ACACBO00763 2458 aa8.11□□□□□ -1.11
COL12A1-201ENST00000322507 ATRAIDQ6UW56 229 aa8.11□□□□□ -1.11
COL12A1-201ENST00000322507 CEND1Q8N111 149 aa8.11□□□□□ -1.11
COL12A1-201ENST00000322507 MALRD1Q5VYJ5 2156 aa8.11□□□□□ -1.11
COL12A1-201ENST00000322507 YPEL2Q96QA6 119 aa8.1□□□□□ -1.11
COL12A1-201ENST00000322507 IGLV3-19P01714 112 aa8.1□□□□□ -1.11
COL12A1-201ENST00000322507 PRB4P10163 310 aaPredicted RBP8.1□□□□□ -1.11
COL12A1-201ENST00000322507 LY96Q9Y6Y9 160 aa8.1□□□□□ -1.11
COL12A1-201ENST00000322507 GFI1BQ5VTD9 330 aa8.1□□□□□ -1.11
COL12A1-201ENST00000322507 VGLL1Q99990 258 aa8.1□□□□□ -1.11
COL12A1-201ENST00000322507 HAMPP81172 84 aa8.1□□□□□ -1.11
COL12A1-201ENST00000322507 TCF15Q12870 199 aa8.1□□□□□ -1.11
COL12A1-201ENST00000322507 CARD19Q96LW7 228 aa8.1□□□□□ -1.11
COL12A1-201ENST00000322507 DSCAML1Q8TD84 2053 aa8.1□□□□□ -1.11
COL12A1-201ENST00000322507 TIMM21Q9BVV7 248 aa8.1□□□□□ -1.11
COL12A1-201ENST00000322507 HLA-DRB4P13762 266 aa8.1□□□□□ -1.11
COL12A1-201ENST00000322507 LRRC75A-AS1Q8N1F1 130 aa8.1□□□□□ -1.11
COL12A1-201ENST00000322507 SLC25A39Q9BZJ4 359 aaPredicted RBP8.1□□□□□ -1.11
COL12A1-201ENST00000322507 C21orf62Q9NYP8 219 aa8.1□□□□□ -1.11
COL12A1-201ENST00000322507 HLA-DRB4X5D2U9 266 aa8.1□□□□□ -1.11
COL12A1-201ENST00000322507 ZG16O60844 167 aa8.1□□□□□ -1.11
COL12A1-201ENST00000322507 ZNF708P17019 499 aa8.1□□□□□ -1.11
COL12A1-201ENST00000322507 ZNF319Q9P2F9 582 aa8.1□□□□□ -1.11
COL12A1-201ENST00000322507 PRO1854Q9UHT4 67 aa8.1□□□□□ -1.11
COL12A1-201ENST00000322507 IGHV2-26A0A0B4J1V2 119 aa8.09□□□□□ -1.11
COL12A1-201ENST00000322507 IL6RP08887 468 aaPredicted RBP8.09□□□□□ -1.11
COL12A1-201ENST00000322507 NPIPB3Q92617 1050 aa8.09□□□□□ -1.11
COL12A1-201ENST00000322507 C19orf48Q6RUI8 117 aa8.09□□□□□ -1.11
COL12A1-201ENST00000322507 REPIN1Q9BWE0 567 aaKnown RBP8.09□□□□□ -1.11
COL12A1-201ENST00000322507 LILRA1O75019 489 aa8.09□□□□□ -1.11
COL12A1-201ENST00000322507 ANKHD1Q8IWZ3 2542 aaKnown RBP8.09□□□□□ -1.11
COL12A1-201ENST00000322507 DUSP14O95147 198 aaKnown RBP8.09□□□□□ -1.11
COL12A1-201ENST00000322507 COX8AP10176 69 aa8.09□□□□□ -1.11
COL12A1-201ENST00000322507 G3V4G9 280 aa8.09□□□□□ -1.11
COL12A1-201ENST00000322507 TIMP3P35625 211 aa8.09□□□□□ -1.11
COL12A1-201ENST00000322507 NAA38Q9BRA0 125 aaKnown RBP8.09□□□□□ -1.11
COL12A1-201ENST00000322507 POLR3KQ9Y2Y1 108 aaPredicted RBP8.09□□□□□ -1.11
COL12A1-201ENST00000322507 C9JCJ5 164 aa8.09□□□□□ -1.11
COL12A1-201ENST00000322507 F5H768 121 aa8.09□□□□□ -1.11
COL12A1-201ENST00000322507 IGHV2OR16-5A0A0B4J2B6 119 aa8.09□□□□□ -1.11
COL12A1-201ENST00000322507 CENPVL1A0A0U1RR11 272 aa8.09□□□□□ -1.11
COL12A1-201ENST00000322507 CENPVL3A0A0U1RRI6 287 aa8.09□□□□□ -1.11
COL12A1-201ENST00000322507 APELAP0DMC3 54 aa8.09□□□□□ -1.11
COL12A1-201ENST00000322507 C8orf86Q6ZUL3 223 aa8.09□□□□□ -1.11
COL12A1-201ENST00000322507 TEN1Q86WV5 123 aa8.09□□□□□ -1.11
COL12A1-201ENST00000322507 TBX6O95947 436 aaPredicted RBP8.09□□□□□ -1.11
COL12A1-201ENST00000322507 TRGV3P03979 118 aa8.09□□□□□ -1.11
COL12A1-201ENST00000322507 WFDC3Q8IUB2 231 aa8.09□□□□□ -1.11
COL12A1-201ENST00000322507 A0A0A6YYD4 124 aa8.08□□□□□ -1.12
COL12A1-201ENST00000322507 PCOLCEQ15113 449 aa8.08□□□□□ -1.12
COL12A1-201ENST00000322507 IGKV3OR2-268A0A0C4DH90 116 aa8.08□□□□□ -1.12
COL12A1-201ENST00000322507 SCO2A0A1W2PP80 73 aa8.08□□□□□ -1.12
COL12A1-201ENST00000322507 PRR32B1ATL7 298 aa8.08□□□□□ -1.12
COL12A1-201ENST00000322507 RNASE2P10153 161 aaKnown RBP8.08□□□□□ -1.12
COL12A1-201ENST00000322507 PRRC2AP48634 2157 aaKnown RBP8.08□□□□□ -1.12
COL12A1-201ENST00000322507 C15orf61A6NNL5 157 aa8.08□□□□□ -1.12
COL12A1-201ENST00000322507 PF4P02776 101 aa8.08□□□□□ -1.12
COL12A1-201ENST00000322507 IL9P15248 144 aa8.08□□□□□ -1.12
COL12A1-201ENST00000322507 TMEM52Q8NDY8 209 aa8.08□□□□□ -1.12
COL12A1-201ENST00000322507 NUP35Q8NFH5 326 aa8.08□□□□□ -1.12
COL12A1-201ENST00000322507 F8VVB4 439 aa8.08□□□□□ -1.12
COL12A1-201ENST00000322507 F8VWA3 439 aa8.08□□□□□ -1.12
COL12A1-201ENST00000322507 FAM219BQ5XKK7 198 aa8.08□□□□□ -1.12
COL12A1-201ENST00000322507 CCL1P22362 96 aa8.08□□□□□ -1.12
COL12A1-201ENST00000322507 CSRP3P50461 194 aa8.08□□□□□ -1.12
COL12A1-201ENST00000322507 C8orf31Q8N9H6 132 aa8.08□□□□□ -1.12
COL12A1-201ENST00000322507 hDV102S1A0JD36 115 aa8.08□□□□□ -1.12
COL12A1-201ENST00000322507 ZXDCQ2QGD7 858 aaPredicted RBP8.08□□□□□ -1.12
COL12A1-201ENST00000322507 TEX43Q6ZNM6 134 aa8.08□□□□□ -1.12
COL12A1-201ENST00000322507 C8orf46Q8TAG6 207 aa8.08□□□□□ -1.12
COL12A1-201ENST00000322507 SONP18583 2426 aaKnown RBP8.08□□□□□ -1.12
COL12A1-201ENST00000322507 IGLV3-32A0A0A0MS00 114 aa8.08□□□□□ -1.12
COL12A1-201ENST00000322507 INS-IGF2F8WCM5 200 aa8.08□□□□□ -1.12
COL12A1-201ENST00000322507 INSP01308 110 aa8.08□□□□□ -1.12
COL12A1-201ENST00000322507 TRGV11A0A075B6L2 103 aa8.07□□□□□ -1.12
COL12A1-201ENST00000322507 Q0VG73 95 aa8.07□□□□□ -1.12
COL12A1-201ENST00000322507 CEP192Q8TEP8 1941 aa8.07□□□□□ -1.12
COL12A1-201ENST00000322507 MRPS36P82909 103 aaKnown RBP8.07□□□□□ -1.12
COL12A1-201ENST00000322507 LINC00527Q9UJ94 153 aa8.07□□□□□ -1.12
COL12A1-201ENST00000322507 IGKV3D-11A0A0A0MRZ8 115 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms