RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 SHANK2-AS3Q9BTD1 123 aa16.21■□□□□ 0.19
TTC39C-202ENST00000317571 TBL2Q9Y4P3 447 aaKnown RBP16.21■□□□□ 0.19
TTC39C-202ENST00000317571 AKAP6Q13023 2319 aa16.21■□□□□ 0.19
TTC39C-202ENST00000317571 HIGD1CA8MV81 97 aa16.21■□□□□ 0.19
TTC39C-202ENST00000317571 HIST1H1EP10412 219 aaKnown RBP16.21■□□□□ 0.19
TTC39C-202ENST00000317571 COX19Q49B96 90 aa16.21■□□□□ 0.19
TTC39C-202ENST00000317571 WIPF2Q8TF74 440 aaPredicted RBP16.21■□□□□ 0.19
TTC39C-202ENST00000317571 TSKUQ8WUA8 353 aa16.21■□□□□ 0.19
TTC39C-202ENST00000317571 UBTD1Q9HAC8 227 aa16.21■□□□□ 0.19
TTC39C-202ENST00000317571 A0A1W2PS18 150 aa16.2■□□□□ 0.18
TTC39C-202ENST00000317571 C19orf71A6NCJ1 209 aa16.2■□□□□ 0.18
TTC39C-202ENST00000317571 ZNF253O75346 499 aa16.2■□□□□ 0.18
TTC39C-202ENST00000317571 KRTDAPP60985 99 aa16.2■□□□□ 0.18
TTC39C-202ENST00000317571 C1orf122Q6ZSJ8 110 aa16.2■□□□□ 0.18
TTC39C-202ENST00000317571 FMC1Q96HJ9 113 aa16.2■□□□□ 0.18
TTC39C-202ENST00000317571 PRSS22Q9GZN4 317 aa16.2■□□□□ 0.18
TTC39C-202ENST00000317571 OTORQ9NRC9 128 aa16.2■□□□□ 0.18
TTC39C-202ENST00000317571 MRPS12O15235 138 aaKnown RBP16.2■□□□□ 0.18
TTC39C-202ENST00000317571 TCF24Q7RTU0 167 aa16.2■□□□□ 0.18
TTC39C-202ENST00000317571 Q8N976 141 aa16.2■□□□□ 0.18
TTC39C-202ENST00000317571 ARPC1AQ92747 370 aa16.2■□□□□ 0.18
TTC39C-202ENST00000317571 AJUBAQ96IF1 538 aa16.2■□□□□ 0.18
TTC39C-202ENST00000317571 KCNS1Q96KK3 526 aa16.2■□□□□ 0.18
TTC39C-202ENST00000317571 ASCL2Q99929 193 aa16.2■□□□□ 0.18
TTC39C-202ENST00000317571 MIEN1Q9BRT3 115 aa16.2■□□□□ 0.18
TTC39C-202ENST00000317571 VAMP8Q9BV40 100 aa16.2■□□□□ 0.18
TTC39C-202ENST00000317571 PRORYQ9H606 182 aa16.2■□□□□ 0.18
TTC39C-202ENST00000317571 ZNF785A8K8V0 405 aa16.19■□□□□ 0.18
TTC39C-202ENST00000317571 IL4P05112 153 aa16.19■□□□□ 0.18
TTC39C-202ENST00000317571 AMTP48728 403 aa16.19■□□□□ 0.18
TTC39C-202ENST00000317571 ZNF562Q6V9R5 426 aa16.19■□□□□ 0.18
TTC39C-202ENST00000317571 Q86TA4 180 aa16.19■□□□□ 0.18
TTC39C-202ENST00000317571 GTSF1Q8WW33 167 aa16.19■□□□□ 0.18
TTC39C-202ENST00000317571 ITLN2Q8WWU7 325 aaPredicted RBP16.19■□□□□ 0.18
TTC39C-202ENST00000317571 RNF125Q96EQ8 232 aa16.19■□□□□ 0.18
TTC39C-202ENST00000317571 SMIM12Q96EX1 92 aa16.19■□□□□ 0.18
TTC39C-202ENST00000317571 NRN1Q9NPD7 142 aa16.19■□□□□ 0.18
TTC39C-202ENST00000317571 NCBP2LA6PVI3 153 aaKnown RBP16.19■□□□□ 0.18
TTC39C-202ENST00000317571 APCSP02743 223 aa16.19■□□□□ 0.18
TTC39C-202ENST00000317571 IGLC2P0DOY2 106 aa16.19■□□□□ 0.18
TTC39C-202ENST00000317571 PMCHP20382 165 aa16.19■□□□□ 0.18
TTC39C-202ENST00000317571 SSBP4Q9BWG4 385 aaPredicted RBP16.19■□□□□ 0.18
TTC39C-202ENST00000317571 ZNF331Q9NQX6 463 aaPredicted RBP16.19■□□□□ 0.18
TTC39C-202ENST00000317571 NPIPB5A8MRT5 1133 aa16.18■□□□□ 0.18
TTC39C-202ENST00000317571 EGR2P11161 476 aaPredicted RBP16.18■□□□□ 0.18
TTC39C-202ENST00000317571 EBI3Q14213 229 aa16.18■□□□□ 0.18
TTC39C-202ENST00000317571 CIARTQ8N365 385 aaPredicted RBP16.18■□□□□ 0.18
TTC39C-202ENST00000317571 TMEM68Q96MH6 324 aa16.18■□□□□ 0.18
TTC39C-202ENST00000317571 ZFHX3Q15911 3703 aa16.18■□□□□ 0.18
TTC39C-202ENST00000317571 TRBV19A0A075B6N1 114 aa16.18■□□□□ 0.18
TTC39C-202ENST00000317571 WI2-2373I1.2A0A1W2PRP0 233 aa16.18■□□□□ 0.18
TTC39C-202ENST00000317571 FAM120AOSQ5T036 256 aa16.18■□□□□ 0.18
TTC39C-202ENST00000317571 GOLT1AQ6ZVE7 132 aa16.18■□□□□ 0.18
TTC39C-202ENST00000317571 A0A1B0GXF2 115 aa16.17■□□□□ 0.18
TTC39C-202ENST00000317571 IGHV3-23P01764 117 aa16.17■□□□□ 0.18
TTC39C-202ENST00000317571 SIGLEC15Q6ZMC9 328 aa16.17■□□□□ 0.18
TTC39C-202ENST00000317571 RPP21Q9H633 154 aaKnown RBP16.17■□□□□ 0.18
TTC39C-202ENST00000317571 DIRC3C9JPN6 131 aa16.17■□□□□ 0.18
TTC39C-202ENST00000317571 TTC9CQ8N5M4 171 aa16.16■□□□□ 0.18
TTC39C-202ENST00000317571 C18orf32Q8TCD1 76 aa16.16■□□□□ 0.18
TTC39C-202ENST00000317571 ZNF492Q9P255 531 aa16.16■□□□□ 0.18
TTC39C-202ENST00000317571 ZNF324O75467 553 aaPredicted RBP16.16■□□□□ 0.18
TTC39C-202ENST00000317571 NDUFB8O95169 186 aa16.16■□□□□ 0.18
TTC39C-202ENST00000317571 CCDC144NLQ6NUI1 221 aa16.16■□□□□ 0.18
TTC39C-202ENST00000317571 RASL11AQ6T310 242 aa16.16■□□□□ 0.18
TTC39C-202ENST00000317571 IGHV7-81A0A0B4J1V7 117 aa16.15■□□□□ 0.18
TTC39C-202ENST00000317571 GNG7O60262 68 aa16.15■□□□□ 0.18
TTC39C-202ENST00000317571 HLA-DRB1P01911 266 aa16.15■□□□□ 0.18
TTC39C-202ENST00000317571 TMEM11P17152 192 aa16.15■□□□□ 0.18
TTC39C-202ENST00000317571 G0S2P27469 103 aa16.15■□□□□ 0.18
TTC39C-202ENST00000317571 FCGR2BP31994 310 aaPredicted RBP16.15■□□□□ 0.18
TTC39C-202ENST00000317571 CAMPP49913 170 aa16.15■□□□□ 0.18
TTC39C-202ENST00000317571 MINOS1Q5TGZ0 78 aa16.15■□□□□ 0.18
TTC39C-202ENST00000317571 BPIFA4PQ86YQ2 179 aa16.15■□□□□ 0.18
TTC39C-202ENST00000317571 FAM19A2Q8N3H0 131 aa16.15■□□□□ 0.18
TTC39C-202ENST00000317571 MINOS1-NBL1R4GNA1 71 aa16.15■□□□□ 0.18
TTC39C-202ENST00000317571 IGHV2-70DA0A0C4DH43 119 aa16.15■□□□□ 0.18
TTC39C-202ENST00000317571 OVOL3O00110 214 aa16.15■□□□□ 0.18
TTC39C-202ENST00000317571 PRNTQ86SH4 94 aa16.15■□□□□ 0.18
TTC39C-202ENST00000317571 CHRDL1Q9BU40 450 aa16.15■□□□□ 0.18
TTC39C-202ENST00000317571 BPESC1Q9GZL8 116 aa16.15■□□□□ 0.18
TTC39C-202ENST00000317571 VPS13CQ709C8 3753 aa16.15■□□□□ 0.18
TTC39C-202ENST00000317571 OOSP1A8MZH6 123 aa16.14■□□□□ 0.17
TTC39C-202ENST00000317571 GNLYP22749 145 aa16.14■□□□□ 0.17
TTC39C-202ENST00000317571 NIT1Q86X76 327 aa16.14■□□□□ 0.17
TTC39C-202ENST00000317571 Q8N9W7 124 aa16.14■□□□□ 0.17
TTC39C-202ENST00000317571 ZNF414Q96IQ9 312 aa16.14■□□□□ 0.17
TTC39C-202ENST00000317571 OR2J3O76001 311 aa16.14■□□□□ 0.17
TTC39C-202ENST00000317571 EFNA4P52798 201 aa16.14■□□□□ 0.17
TTC39C-202ENST00000317571 LMO4P61968 165 aa16.14■□□□□ 0.17
TTC39C-202ENST00000317571 NPIPB6E9PJ23 425 aa16.13■□□□□ 0.17
TTC39C-202ENST00000317571 M0R3E3 92 aa16.13■□□□□ 0.17
TTC39C-202ENST00000317571 P01737 135 aa16.13■□□□□ 0.17
TTC39C-202ENST00000317571 M0QZK8 103 aa16.13■□□□□ 0.17
TTC39C-202ENST00000317571 MFAP4P55083 255 aa16.13■□□□□ 0.17
TTC39C-202ENST00000317571 ZNF48Q96MX3 618 aaPredicted RBP16.13■□□□□ 0.17
TTC39C-202ENST00000317571 C3orf79P0CE67 100 aa16.12■□□□□ 0.17
TTC39C-202ENST00000317571 CT83Q5H943 113 aa16.12■□□□□ 0.17
TTC39C-202ENST00000317571 OR4F17Q8NGA8 305 aa16.12■□□□□ 0.17
TTC39C-202ENST00000317571 OR4B1Q8NGF8 309 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms