RNA–Protein interactions for RNA: ENST00000313352.11

PUF60-201, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PUF60, Length 1,804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-201ENST00000313352 LINC00305Q7Z4B0 112 aa12.58□□□□□ -0.4
PUF60-201ENST00000313352 LINC00052Q96N35 136 aa12.58□□□□□ -0.4
PUF60-201ENST00000313352 PFDN2Q9UHV9 154 aa12.58□□□□□ -0.4
PUF60-201ENST00000313352 RFNGQ9Y644 331 aa12.58□□□□□ -0.4
PUF60-201ENST00000313352 TRAV5A0A0B4J249 113 aa12.57□□□□□ -0.4
PUF60-201ENST00000313352 RPL12P30050 165 aaKnown RBP12.57□□□□□ -0.4
PUF60-201ENST00000313352 NUP62P37198 522 aaPredicted RBP12.57□□□□□ -0.4
PUF60-201ENST00000313352 CMC4P56277 68 aaPredicted RBP12.57□□□□□ -0.4
PUF60-201ENST00000313352 WFDC1Q9HC57 220 aa12.57□□□□□ -0.4
PUF60-201ENST00000313352 FBXL17Q9UF56 701 aa12.57□□□□□ -0.4
PUF60-201ENST00000313352 F6UB75 175 aa12.56□□□□□ -0.4
PUF60-201ENST00000313352 GIG44P09565 113 aaPredicted RBP12.56□□□□□ -0.4
PUF60-201ENST00000313352 LYL1P12980 280 aa12.56□□□□□ -0.4
PUF60-201ENST00000313352 FGL1Q08830 312 aa12.56□□□□□ -0.4
PUF60-201ENST00000313352 ATP6V1FQ16864 119 aa12.56□□□□□ -0.4
PUF60-201ENST00000313352 NPCDR1Q9BY65 106 aa12.56□□□□□ -0.4
PUF60-201ENST00000313352 EDA2RQ9HAV5 297 aa12.56□□□□□ -0.4
PUF60-201ENST00000313352 SLC39A9Q9NUM3 307 aa12.56□□□□□ -0.4
PUF60-201ENST00000313352 HSPB11Q9Y547 144 aa12.56□□□□□ -0.4
PUF60-201ENST00000313352 PXMP4Q9Y6I8 212 aa12.56□□□□□ -0.4
PUF60-201ENST00000313352 MRPS12O15235 138 aaKnown RBP12.55□□□□□ -0.4
PUF60-201ENST00000313352 GALR1P47211 349 aa12.55□□□□□ -0.4
PUF60-201ENST00000313352 APOC4P55056 127 aa12.55□□□□□ -0.4
PUF60-201ENST00000313352 B2MP61769 119 aa12.55□□□□□ -0.4
PUF60-201ENST00000313352 TRPT1Q86TN4 253 aaKnown RBP12.55□□□□□ -0.4
PUF60-201ENST00000313352 STHQ8IWL8 128 aa12.55□□□□□ -0.4
PUF60-201ENST00000313352 CSTL1Q9H114 145 aa12.55□□□□□ -0.4
PUF60-201ENST00000313352 TRAV8-2A0A0B4J237 113 aa12.55□□□□□ -0.4
PUF60-201ENST00000313352 H3BTX0 84 aa12.55□□□□□ -0.4
PUF60-201ENST00000313352 COX7A2P2O60397 106 aa12.55□□□□□ -0.4
PUF60-201ENST00000313352 PET100P0DJ07 73 aa12.55□□□□□ -0.4
PUF60-201ENST00000313352 HLA-DMBP28068 263 aa12.55□□□□□ -0.4
PUF60-201ENST00000313352 RPL29P47914 159 aaKnown RBP12.55□□□□□ -0.4
PUF60-201ENST00000313352 SNRPD3P62318 126 aaKnown RBP12.55□□□□□ -0.4
PUF60-201ENST00000313352 RNF182Q8N6D2 247 aa12.55□□□□□ -0.4
PUF60-201ENST00000313352 CHAC2Q8WUX2 184 aa12.55□□□□□ -0.4
PUF60-201ENST00000313352 KIR2DL5BA0A0G2JN68 375 aa12.54□□□□□ -0.4
PUF60-201ENST00000313352 KIR2DL5BA0A0G2JPC4 375 aa12.54□□□□□ -0.4
PUF60-201ENST00000313352 C4BPBP20851 252 aa12.54□□□□□ -0.4
PUF60-201ENST00000313352 RAB31Q13636 194 aa12.54□□□□□ -0.4
PUF60-201ENST00000313352 C10orf113Q5VZT2 155 aa12.54□□□□□ -0.4
PUF60-201ENST00000313352 KIR2DL5AQ8N109 375 aa12.54□□□□□ -0.4
PUF60-201ENST00000313352 KIR2DL5BQ8NHK3 375 aa12.54□□□□□ -0.4
PUF60-201ENST00000313352 C16orf92Q96LL3 132 aa12.54□□□□□ -0.4
PUF60-201ENST00000313352 WDR61Q9GZS3 305 aaKnown RBP12.54□□□□□ -0.4
PUF60-201ENST00000313352 DNAJC4Q9NNZ3 241 aa12.54□□□□□ -0.4
PUF60-201ENST00000313352 DNAH7Q8WXX0 4024 aa12.53□□□□□ -0.4
PUF60-201ENST00000313352 G3V3Q6 166 aa12.53□□□□□ -0.4
PUF60-201ENST00000313352 CA1P00915 261 aaPredicted RBP12.53□□□□□ -0.4
PUF60-201ENST00000313352 Q6ZRG5 221 aa12.53□□□□□ -0.4
PUF60-201ENST00000313352 IGKV3-20P01619 116 aa12.53□□□□□ -0.4
PUF60-201ENST00000313352 SPATA31B1PQ5VZV4 182 aa12.53□□□□□ -0.4
PUF60-201ENST00000313352 Q6ZWC4 215 aa12.53□□□□□ -0.4
PUF60-201ENST00000313352 ATP5SQ99766 215 aa12.53□□□□□ -0.4
PUF60-201ENST00000313352 CLEC5AQ9NY25 188 aa12.53□□□□□ -0.4
PUF60-201ENST00000313352 H3BMM0 161 aa12.52□□□□□ -0.41
PUF60-201ENST00000313352 SPRY2O43597 315 aa12.52□□□□□ -0.41
PUF60-201ENST00000313352 RPL7P18124 248 aaKnown RBP12.52□□□□□ -0.41
PUF60-201ENST00000313352 PSMB3P49720 205 aa12.52□□□□□ -0.41
PUF60-201ENST00000313352 PXDC1Q5TGL8 231 aa12.52□□□□□ -0.41
PUF60-201ENST00000313352 RNF183Q96D59 192 aa12.52□□□□□ -0.41
PUF60-201ENST00000313352 SMLR1H3BR10 107 aa12.51□□□□□ -0.41
PUF60-201ENST00000313352 ISLRO14498 428 aa12.51□□□□□ -0.41
PUF60-201ENST00000313352 GIPP09681 153 aaPredicted RBP12.51□□□□□ -0.41
PUF60-201ENST00000313352 ZNF705DP0CH99 300 aaPredicted RBP12.51□□□□□ -0.41
PUF60-201ENST00000313352 ZNF705BP0CI00 300 aaPredicted RBP12.51□□□□□ -0.41
PUF60-201ENST00000313352 ATF4P18848 351 aaPredicted RBP12.51□□□□□ -0.41
PUF60-201ENST00000313352 SEPSECSQ9HD40 501 aaKnown RBP12.51□□□□□ -0.41
PUF60-201ENST00000313352 ELOA3CA0A087WX78 387 aaPredicted RBP12.51□□□□□ -0.41
PUF60-201ENST00000313352 H3BQ15 152 aa12.51□□□□□ -0.41
PUF60-201ENST00000313352 SLC17A3O00476 420 aa12.51□□□□□ -0.41
PUF60-201ENST00000313352 EIF3GO75821 320 aaKnown RBP eCLIP12.51□□□□□ -0.41
PUF60-201ENST00000313352 FXYD7P58549 80 aa12.51□□□□□ -0.41
PUF60-201ENST00000313352 GPR82Q96P67 336 aa12.51□□□□□ -0.41
PUF60-201ENST00000313352 CSMD3Q7Z407 3707 aa12.5□□□□□ -0.41
PUF60-201ENST00000313352 UBE2CO00762 179 aa12.5□□□□□ -0.41
PUF60-201ENST00000313352 MPDU1O75352 247 aa12.5□□□□□ -0.41
PUF60-201ENST00000313352 HLA-DRB4P13762 266 aa12.5□□□□□ -0.41
PUF60-201ENST00000313352 ID1P41134 155 aa12.5□□□□□ -0.41
PUF60-201ENST00000313352 SAV1Q9H4B6 383 aaPredicted RBP12.5□□□□□ -0.41
PUF60-201ENST00000313352 HLA-DRB4X5D2U9 266 aa12.5□□□□□ -0.41
PUF60-201ENST00000313352 OR1L4Q8NGR5 311 aa12.49□□□□□ -0.41
PUF60-201ENST00000313352 OR2T35Q8NGX2 323 aa12.49□□□□□ -0.41
PUF60-201ENST00000313352 A0A087X0K7 114 aa12.48□□□□□ -0.41
PUF60-201ENST00000313352 IGLC2P0DOY2 106 aa12.48□□□□□ -0.41
PUF60-201ENST00000313352 MEOX2P50222 304 aa12.48□□□□□ -0.41
PUF60-201ENST00000313352 MIR17HGQ75NE6 70 aa12.48□□□□□ -0.41
PUF60-201ENST00000313352 OR4B1Q8NGF8 309 aa12.48□□□□□ -0.41
PUF60-201ENST00000313352 A0A0J9YWU9 116 aa12.48□□□□□ -0.41
PUF60-201ENST00000313352 PYYP10082 97 aa12.48□□□□□ -0.41
PUF60-201ENST00000313352 S100A7P31151 101 aa12.48□□□□□ -0.41
PUF60-201ENST00000313352 FAM78BQ5VT40 261 aa12.48□□□□□ -0.41
PUF60-201ENST00000313352 FOXI2Q6ZQN5 318 aa12.48□□□□□ -0.41
PUF60-201ENST00000313352 BPIFA4PQ86YQ2 179 aa12.48□□□□□ -0.41
PUF60-201ENST00000313352 PFDN5Q99471 154 aa12.48□□□□□ -0.41
PUF60-201ENST00000313352 TP53TG1Q9Y2A0 90 aa12.48□□□□□ -0.41
PUF60-201ENST00000313352 FXYD6-FXYD2A0A087WZ82 144 aa12.47□□□□□ -0.41
PUF60-201ENST00000313352 A0A0J9YX75 114 aa12.47□□□□□ -0.41
PUF60-201ENST00000313352 RNF222A6NCQ9 220 aa12.47□□□□□ -0.41
PUF60-201ENST00000313352 CSNK1G2-AS1Q8NCQ2 148 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms